Gene annotation
Transcriptome id Sobic.004G091100.1
Synonym Sb04g007460
Functional annotation nuclear protein ZAP-related, putative, expressed
UniProt A0A194YNM7
Pfam -
Panther DB PTHR13413 PTHR13413:SF0
NCBI CDD -
KEGG Orthology K17602; YLP motif-containing protein 1
Gene Ontology GO:0005634; nucleus


Orthologs (automatic annotation)
TAIR AT5G62760 : P-loop containing nucleoside triphosphate hydrolases superfamily protein
RAP-DB (Rice) LOC_Os02g12360.1 : nuclear protein ZAP-related, putative, expressed
MaizeGDB (Corn) Zm00025a020210
Brachypodium PNT66167 , KQJ94021 , KQJ94022
Barley HORVU6Hr1G038590.20 , HORVU6Hr1G038590.21 , HORVU6Hr1G038590.22 , HORVU6Hr1G038590.23 , HORVU6Hr1G038590.24 , HORVU6Hr1G038590.25 , HORVU6Hr1G038590.26 , HORVU6Hr1G038590.15 , HORVU6Hr1G038590.14 , HORVU6Hr1G038590.17 , HORVU6Hr1G038590.16 , HORVU6Hr1G038590.11 , HORVU6Hr1G038590.10 , HORVU6Hr1G038590.13 , HORVU6Hr1G038590.12 , HORVU6Hr1G038590.19 , HORVU6Hr1G038590.18 , HORVU6Hr1G038590.1 , HORVU6Hr1G038590.3 , HORVU6Hr1G038590.2 , HORVU6Hr1G038590.5 , HORVU6Hr1G038590.4 , HORVU6Hr1G038590.7 , HORVU6Hr1G038590.6 , HORVU6Hr1G038590.9 , HORVU6Hr1G038590.8
Wheat TraesCS6A02G184400 , TraesCS6A02G184400 , TraesCS6D02G170600 , TraesCS6D02G170600 , TraesCS6D02G170600 , TraesCS6B02G212100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G165700 SAC3/GANP family protein, putative, expressed -
2 Sobic.001G451400 HEAT repeat family protein, putative, expressed K15305: VAC14, vacuole morphology and inheritance protein 14
3 Sobic.010G118950 - -
4 Sobic.009G191000 MATH domain containing protein, expressed -
5 Sobic.008G087866 - -
6 Sobic.001G128300 chloride channel protein CLC-d, putative, expressed K05016: chloride channel 7
7 Sobic.001G534700 plus-3 domain containing protein, putative, expressed -
8 Sobic.003G422500 expressed protein -
9 Sobic.001G050200 expressed protein -
10 Sobic.001G441400 transcription factor, putative, expressed K09060: plant G-box-binding factor
11 Sobic.007G207000 Highest expression level in primordial inflorescence(PubMedID : 27501690)@OsSPL15 - SBP-box gene family member, expressed -
12 Sobic.002G411600 CW-type Zinc Finger, putative, expressed -
13 Sobic.004G351100 signal peptide peptidase-like 2B, putative, expressed K09597: signal peptide peptidase-like 2B
14 Sobic.001G389100 DUF630/DUF632 domains containing protein, putative, expressed -
15 Sobic.001G111850 - -
16 Sobic.001G043100 EMB1745, putative, expressed K18723: nucleoporin GLE1
17 Sobic.010G247800 zinc finger, C3HC4 type domain containing protein, expressed K10696: E3 ubiquitin-protein ligase BRE1
18 Sobic.003G362600 AT hook motif family protein, expressed K15200: general transcription factor 3C polypeptide 2
19 Sobic.003G170900 - -
20 Sobic.001G220300 serine/threonine-protein phosphatase 2A regulatory subunit B subunitbeta, putative, expressed K11583: serine/threonine-protein phosphatase 2A regulatory subunit B''


Gene co-expression network
sample Sobic004G091100 Sobic004G091100 Sobic009G165700 Sobic009G165700 Sobic004G091100--Sobic009G165700 Sobic001G451400 Sobic001G451400 Sobic004G091100--Sobic001G451400 Sobic010G118950 Sobic010G118950 Sobic004G091100--Sobic010G118950 Sobic009G191000 Sobic009G191000 Sobic004G091100--Sobic009G191000 Sobic008G087866 Sobic008G087866 Sobic004G091100--Sobic008G087866 Sobic001G128300 Sobic001G128300 Sobic004G091100--Sobic001G128300 Sobic001G534700 Sobic001G534700 Sobic004G091100--Sobic001G534700 Sobic003G422500 Sobic003G422500 Sobic004G091100--Sobic003G422500 Sobic001G050200 Sobic001G050200 Sobic004G091100--Sobic001G050200 Sobic009G165700--Sobic003G422500 Sobic010G247800 Sobic010G247800 Sobic009G165700--Sobic010G247800 Sobic010G206900 Sobic010G206900 Sobic009G165700--Sobic010G206900 Sobic003G166750 Sobic003G166750 Sobic009G165700--Sobic003G166750 Sobic009G165700--Sobic008G087866 Sobic009G165700--Sobic001G451400 Sobic003G170900 Sobic003G170900 Sobic009G165700--Sobic003G170900 Sobic009G165700--Sobic001G534700 Sobic008G001200 Sobic008G001200 Sobic009G165700--Sobic008G001200 Sobic007G008900 Sobic007G008900 Sobic001G451400--Sobic007G008900 Sobic001G451400--Sobic009G165700 Sobic001G441400 Sobic001G441400 Sobic001G451400--Sobic001G441400 Sobic001G389100 Sobic001G389100 Sobic001G451400--Sobic001G389100 Sobic001G451400--Sobic010G247800 Sobic003G404500 Sobic003G404500 Sobic001G451400--Sobic003G404500 Sobic010G226000 Sobic010G226000 Sobic001G451400--Sobic010G226000 Sobic005G027400 Sobic005G027400 Sobic001G451400--Sobic005G027400 Sobic001G451400--Sobic003G422500 Sobic004G351100 Sobic004G351100 Sobic010G118950--Sobic004G351100 Sobic004G277200 Sobic004G277200 Sobic010G118950--Sobic004G277200 Sobic010G116600 Sobic010G116600 Sobic010G118950--Sobic010G116600 Sobic010G053800 Sobic010G053800 Sobic010G118950--Sobic010G053800 Sobic002G299700 Sobic002G299700 Sobic010G118950--Sobic002G299700 Sobic010G118950--Sobic001G441400 Sobic010G118950--Sobic004G091100 Sobic010G275500 Sobic010G275500 Sobic010G118950--Sobic010G275500 Sobic001G196500 Sobic001G196500 Sobic010G118950--Sobic001G196500 Sobic002G008900 Sobic002G008900 Sobic009G191000--Sobic002G008900 Sobic002G411600 Sobic002G411600 Sobic009G191000--Sobic002G411600 Sobic009G191000--Sobic003G422500 Sobic009G053900 Sobic009G053900 Sobic009G191000--Sobic009G053900 Sobic001G289600 Sobic001G289600 Sobic009G191000--Sobic001G289600 Sobic003G313500 Sobic003G313500 Sobic009G191000--Sobic003G313500 Sobic009G191000--Sobic010G247800 Sobic004G034900 Sobic004G034900 Sobic009G191000--Sobic004G034900 Sobic001G365900 Sobic001G365900 Sobic009G191000--Sobic001G365900 Sobic008G087866--Sobic009G165700 Sobic008G087866--Sobic003G422500 Sobic008G087866--Sobic008G001200 Sobic001G117200 Sobic001G117200 Sobic008G087866--Sobic001G117200 Sobic008G087866--Sobic003G166750 Sobic005G001000 Sobic005G001000 Sobic008G087866--Sobic005G001000 Sobic008G087866--Sobic003G170900 Sobic001G194200 Sobic001G194200 Sobic008G087866--Sobic001G194200 Sobic001G370900 Sobic001G370900 Sobic008G087866--Sobic001G370900 Sobic001G128300--Sobic009G165700 Sobic001G128300--Sobic001G451400 Sobic001G251200 Sobic001G251200 Sobic001G128300--Sobic001G251200 Sobic001G128300--Sobic004G091100 Sobic001G043100 Sobic001G043100 Sobic001G128300--Sobic001G043100 Sobic009G109925 Sobic009G109925 Sobic001G128300--Sobic009G109925 Sobic003G198800 Sobic003G198800 Sobic001G128300--Sobic003G198800 Sobic001G128300--Sobic001G441400 Sobic002G211800 Sobic002G211800 Sobic001G128300--Sobic002G211800 Sobic001G534700--Sobic010G206900 Sobic001G534700--Sobic001G365900 Sobic001G534700--Sobic002G411600 Sobic003G316500 Sobic003G316500 Sobic001G534700--Sobic003G316500 Sobic001G534700--Sobic009G165700 Sobic001G534700--Sobic004G034900 Sobic001G534700--Sobic002G008900 Sobic001G534700--Sobic003G422500 Sobic001G534700--Sobic008G001200 Sobic003G422500--Sobic002G411600 Sobic003G422500--Sobic009G191000 Sobic003G422500--Sobic001G289600 Sobic003G422500--Sobic009G165700 Sobic003G422500--Sobic002G008900 Sobic003G422500--Sobic004G034900 Sobic001G289800 Sobic001G289800 Sobic003G422500--Sobic001G289800 Sobic001G540400 Sobic001G540400 Sobic003G422500--Sobic001G540400 Sobic008G132600 Sobic008G132600 Sobic003G422500--Sobic008G132600 Sobic002G419800 Sobic002G419800 Sobic001G050200--Sobic002G419800 Sobic001G050200--Sobic003G422500 Sobic009G027300 Sobic009G027300 Sobic001G050200--Sobic009G027300 Sobic003G247300 Sobic003G247300 Sobic001G050200--Sobic003G247300 Sobic001G050200--Sobic009G191000 Sobic007G075400 Sobic007G075400 Sobic001G050200--Sobic007G075400 Sobic004G269200 Sobic004G269200 Sobic001G050200--Sobic004G269200 Sobic004G331100 Sobic004G331100 Sobic001G050200--Sobic004G331100 Sobic003G101400 Sobic003G101400 Sobic001G050200--Sobic003G101400
Octagon: transcription factors


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