Gene annotation
Transcriptome id Sobic.001G389100.4,Sobic.001G389100.1,Sobic.001G389100.3,Sobic.001G389100.2
Synonym Sb01g036880
Functional annotation DUF630/DUF632 domains containing protein, putative, expressed
UniProt A0A1B6QNI6 , A0A1Z5S9W2 , A0A1Z5SA29
Pfam PF04782 PF04783 PF04783 PF04782
Panther DB PTHR21450:SF6 PTHR21450 PTHR21450 PTHR21450:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G27090 : Protein of unknown function (DUF630 and DUF632)
RAP-DB (Rice) LOC_Os03g20530.1 : DUF630/DUF632 domains containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a002248
Brachypodium KQK21900 , KQK21914 , KQK21915
Barley HORVU4Hr1G052040.8 , HORVU4Hr1G052040.5 , HORVU4Hr1G052040.4 , HORVU4Hr1G052040.7 , HORVU4Hr1G052040.6 , HORVU4Hr1G052040.1 , HORVU4Hr1G052040.3 , HORVU4Hr1G052040.2
Wheat TraesCS4A02G128000 , TraesCS4A02G128000 , TraesCS4A02G128000 , TraesCS4A02G128000 , TraesCS4A02G128000 , TraesCS4B02G176800 , TraesCS4B02G176800 , TraesCS4B02G176800 , TraesCS4B02G176800 , TraesCS4D02G178500 , TraesCS4D02G178500 , TraesCS4D02G178500 , TraesCS4D02G178500
Populus -


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cDNA sequences
Sobic.001G389100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G451400 HEAT repeat family protein, putative, expressed K15305: VAC14, vacuole morphology and inheritance protein 14
2 Sobic.003G316500 expressed protein -
3 Sobic.009G165700 SAC3/GANP family protein, putative, expressed -
4 Sobic.001G534700 plus-3 domain containing protein, putative, expressed -
5 Sobic.010G206900 transcription initiation factor TFIID subunit 1, putative, expressed K03125: transcription initiation factor TFIID subunit 1
6 Sobic.010G247800 zinc finger, C3HC4 type domain containing protein, expressed K10696: E3 ubiquitin-protein ligase BRE1
7 Sobic.009G053900 HECT-domain domain containing protein, expressed K10589: ubiquitin-protein ligase E3 C
8 Sobic.001G365900 PWWP domain containing protein, expressed -
9 Sobic.002G252800 OsFBX332 - F-box domain containing protein, expressed -
10 Sobic.003G029700 CK1_CaseinKinase_1a.5 - CK1 includes the casein kinase 1 kinases, expressed -
11 Sobic.007G207000 Highest expression level in primordial inflorescence(PubMedID : 27501690)@OsSPL15 - SBP-box gene family member, expressed -
12 Sobic.003G422500 expressed protein -
13 Sobic.008G047800 WD domain, G-beta repeat domain containing protein, expressed K15361: WDR48, WD repeat-containing protein 48
14 Sobic.009G191000 MATH domain containing protein, expressed -
15 Sobic.003G221900 helix-loop-helix DNA-binding domain containing protein, expressed -
16 Sobic.006G142775 - K11592: DICER1, endoribonuclease Dicer
17 Sobic.002G294800 cyclic nucleotide-gated ion channel, putative, expressed K05391: cyclic nucleotide gated channel, plant
18 Sobic.008G046500 Cellular calcium signals(PubMedID : 19860013)@calcineurin B, putative, expressed K06268: PPP3R, serine/threonine-protein phosphatase 2B regulatory subunit
19 Sobic.003G275700 myosin head family protein, expressed K10357: myosin V
20 Sobic.004G091100 nuclear protein ZAP-related, putative, expressed K17602: YLP motif-containing protein 1


Gene co-expression network
sample Sobic001G389100 Sobic001G389100 Sobic001G451400 Sobic001G451400 Sobic001G389100--Sobic001G451400 Sobic003G316500 Sobic003G316500 Sobic001G389100--Sobic003G316500 Sobic009G165700 Sobic009G165700 Sobic001G389100--Sobic009G165700 Sobic001G534700 Sobic001G534700 Sobic001G389100--Sobic001G534700 Sobic010G206900 Sobic010G206900 Sobic001G389100--Sobic010G206900 Sobic010G247800 Sobic010G247800 Sobic001G389100--Sobic010G247800 Sobic009G053900 Sobic009G053900 Sobic001G389100--Sobic009G053900 Sobic001G365900 Sobic001G365900 Sobic001G389100--Sobic001G365900 Sobic002G252800 Sobic002G252800 Sobic001G389100--Sobic002G252800 Sobic007G008900 Sobic007G008900 Sobic001G451400--Sobic007G008900 Sobic001G451400--Sobic009G165700 Sobic001G441400 Sobic001G441400 Sobic001G451400--Sobic001G441400 Sobic001G451400--Sobic001G389100 Sobic001G451400--Sobic010G247800 Sobic003G404500 Sobic003G404500 Sobic001G451400--Sobic003G404500 Sobic010G226000 Sobic010G226000 Sobic001G451400--Sobic010G226000 Sobic005G027400 Sobic005G027400 Sobic001G451400--Sobic005G027400 Sobic003G422500 Sobic003G422500 Sobic001G451400--Sobic003G422500 Sobic003G316500--Sobic001G534700 Sobic003G316500--Sobic009G053900 Sobic009G074400 Sobic009G074400 Sobic003G316500--Sobic009G074400 Sobic003G316500--Sobic001G389100 Sobic010G147100 Sobic010G147100 Sobic003G316500--Sobic010G147100 Sobic003G316500--Sobic001G365900 Sobic003G316500--Sobic009G165700 Sobic003G316500--Sobic001G451400 Sobic003G316500--Sobic010G206900 Sobic009G165700--Sobic003G422500 Sobic009G165700--Sobic010G247800 Sobic009G165700--Sobic010G206900 Sobic003G166750 Sobic003G166750 Sobic009G165700--Sobic003G166750 Sobic008G087866 Sobic008G087866 Sobic009G165700--Sobic008G087866 Sobic009G165700--Sobic001G451400 Sobic003G170900 Sobic003G170900 Sobic009G165700--Sobic003G170900 Sobic009G165700--Sobic001G534700 Sobic008G001200 Sobic008G001200 Sobic009G165700--Sobic008G001200 Sobic001G534700--Sobic010G206900 Sobic001G534700--Sobic001G365900 Sobic002G411600 Sobic002G411600 Sobic001G534700--Sobic002G411600 Sobic001G534700--Sobic003G316500 Sobic001G534700--Sobic009G165700 Sobic004G034900 Sobic004G034900 Sobic001G534700--Sobic004G034900 Sobic002G008900 Sobic002G008900 Sobic001G534700--Sobic002G008900 Sobic001G534700--Sobic003G422500 Sobic001G534700--Sobic008G001200 Sobic010G010700 Sobic010G010700 Sobic010G206900--Sobic010G010700 Sobic010G206900--Sobic001G365900 Sobic010G206900--Sobic004G034900 Sobic010G206900--Sobic001G534700 Sobic010G206900--Sobic010G247800 Sobic010G206900--Sobic002G411600 Sobic010G206900--Sobic008G001200 Sobic003G196300 Sobic003G196300 Sobic010G206900--Sobic003G196300 Sobic010G206900--Sobic009G165700 Sobic010G247800--Sobic010G206900 Sobic010G247800--Sobic009G165700 Sobic010G247800--Sobic002G411600 Sobic010G247800--Sobic003G422500 Sobic009G191000 Sobic009G191000 Sobic010G247800--Sobic009G191000 Sobic001G002000 Sobic001G002000 Sobic010G247800--Sobic001G002000 Sobic001G363500 Sobic001G363500 Sobic010G247800--Sobic001G363500 Sobic004G291900 Sobic004G291900 Sobic010G247800--Sobic004G291900 Sobic002G405800 Sobic002G405800 Sobic010G247800--Sobic002G405800 Sobic009G053900--Sobic009G191000 Sobic003G118200 Sobic003G118200 Sobic009G053900--Sobic003G118200 Sobic009G053900--Sobic002G008900 Sobic009G053900--Sobic003G422500 Sobic009G053900--Sobic001G365900 Sobic001G289600 Sobic001G289600 Sobic009G053900--Sobic001G289600 Sobic009G053900--Sobic010G206900 Sobic007G075400 Sobic007G075400 Sobic009G053900--Sobic007G075400 Sobic001G540400 Sobic001G540400 Sobic009G053900--Sobic001G540400 Sobic001G365900--Sobic010G206900 Sobic001G365900--Sobic001G534700 Sobic001G365900--Sobic001G289600 Sobic008G130100 Sobic008G130100 Sobic001G365900--Sobic008G130100 Sobic001G365900--Sobic002G411600 Sobic001G365900--Sobic002G008900 Sobic001G365900--Sobic009G191000 Sobic001G365900--Sobic004G034900 Sobic001G365900--Sobic001G540400 Sobic002G252800--Sobic001G389100 Sobic002G104100 Sobic002G104100 Sobic002G252800--Sobic002G104100 Sobic003G229300 Sobic003G229300 Sobic002G252800--Sobic003G229300 Sobic003G222900 Sobic003G222900 Sobic002G252800--Sobic003G222900 Sobic003G029700 Sobic003G029700 Sobic002G252800--Sobic003G029700 Sobic006G105400 Sobic006G105400 Sobic002G252800--Sobic006G105400 Sobic002G252800--Sobic001G365900 Sobic002G133400 Sobic002G133400 Sobic002G252800--Sobic002G133400 Sobic006G048600 Sobic006G048600 Sobic002G252800--Sobic006G048600
Octagon: transcription factors


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