Gene annotation
Transcriptome id Sobic.002G294800.1
Synonym Sb02g032610, CNGC14, ATCNGC14
Functional annotation cyclic nucleotide-gated ion channel, putative, expressed
UniProt C5X7U0
Pfam PF00027 PF00520
Panther DB PTHR10217 PTHR10217:SF541
NCBI CDD -
KEGG Orthology K05391; cyclic nucleotide gated channel, plant
Gene Ontology GO:0016020; membrane GO:0006811ion transport GO:0005216ion channel activity


Orthologs (automatic annotation)
TAIR AT2G24610 : cyclic nucleotide-gated channel 14
RAP-DB (Rice) LOC_Os09g38580.1 : cyclic nucleotide-gated ion channel, putative, expressed
MaizeGDB (Corn) Zm00025a047899
Brachypodium KQJ91443
Barley HORVU5Hr1G088830.3 , HORVU5Hr1G088830.2 , HORVU5Hr1G088830.1 , HORVU5Hr1G088830.6 , HORVU5Hr1G088830.7 , HORVU5Hr1G088830.4 , HORVU5Hr1G088830.5
Wheat TraesCS5D02G369600 , TraesCS5D02G369600 , TraesCS5A02G360200 , TraesCS5B02G362700
Populus -


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cDNA sequences
Sobic.002G294800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G027400 RNA recognition motif containing protein, expressed K13161: heterogeneous nuclear ribonucleoprotein R
2 Sobic.001G241100 DNA-binding protein-like, putative, expressed K10624: E3 ubiquitin-protein ligase RBBP6
3 Sobic.003G355900 prenylated rab acceptor, putative, expressed -
4 Sobic.002G211800 AT-rich interaction region, putative, expressed -
5 Sobic.005G059800 RNA recognition motif containing protein, putative, expressed K14407: CSTF2, cleavage stimulation factor subunit 2
6 Sobic.001G261501 - -
7 Sobic.010G032900 transketolase, putative, expressed K01662: 1-deoxy-D-xylulose-5-phosphate synthase
8 Sobic.001G389100 DUF630/DUF632 domains containing protein, putative, expressed -
9 Sobic.010G013200 CPuORF21 - conserved peptide uORF-containing transcript, expressed K08829: male germ cell-associated kinase
10 Sobic.009G074400 CK1_CaseinKinase_1a.5 - CK1 includes the casein kinase 1 kinases, expressed -
11 Sobic.006G086500 STE_MEKK_ste11_MAP3K.16 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
12 Sobic.001G451400 HEAT repeat family protein, putative, expressed K15305: VAC14, vacuole morphology and inheritance protein 14
13 Sobic.008G070800 expressed protein -
14 Sobic.001G226700 WD repeat-containing protein, putative, expressed -
15 Sobic.010G143800 expressed protein -
16 Sobic.001G186800 ATPAP18/PAP18, putative, expressed -
17 Sobic.001G392300 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12820: DHX15, pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43
18 Sobic.001G191600 TMS membrane protein/tumour differentially expressed protein, putative, expressed -
19 Sobic.008G103200 OsPOP1 - Putative Prolyl Oligopeptidase homologue, expressed K01322: prolyl oligopeptidase
20 Sobic.001G268200 zinc finger, C3HC4 type domain containing protein, expressed -


Gene co-expression network
sample Sobic002G294800 Sobic002G294800 Sobic005G027400 Sobic005G027400 Sobic002G294800--Sobic005G027400 Sobic001G241100 Sobic001G241100 Sobic002G294800--Sobic001G241100 Sobic003G355900 Sobic003G355900 Sobic002G294800--Sobic003G355900 Sobic002G211800 Sobic002G211800 Sobic002G294800--Sobic002G211800 Sobic005G059800 Sobic005G059800 Sobic002G294800--Sobic005G059800 Sobic001G261501 Sobic001G261501 Sobic002G294800--Sobic001G261501 Sobic010G032900 Sobic010G032900 Sobic002G294800--Sobic010G032900 Sobic001G389100 Sobic001G389100 Sobic002G294800--Sobic001G389100 Sobic010G013200 Sobic010G013200 Sobic002G294800--Sobic010G013200 Sobic002G309600 Sobic002G309600 Sobic005G027400--Sobic002G309600 Sobic004G065100 Sobic004G065100 Sobic005G027400--Sobic004G065100 Sobic001G451400 Sobic001G451400 Sobic005G027400--Sobic001G451400 Sobic009G132700 Sobic009G132700 Sobic005G027400--Sobic009G132700 Sobic007G117400 Sobic007G117400 Sobic005G027400--Sobic007G117400 Sobic001G219600 Sobic001G219600 Sobic005G027400--Sobic001G219600 Sobic001G289800 Sobic001G289800 Sobic005G027400--Sobic001G289800 Sobic008G047800 Sobic008G047800 Sobic005G027400--Sobic008G047800 Sobic004G006900 Sobic004G006900 Sobic005G027400--Sobic004G006900 Sobic001G241100--Sobic002G294800 Sobic001G241100--Sobic005G027400 Sobic003G195000 Sobic003G195000 Sobic001G241100--Sobic003G195000 Sobic001G241100--Sobic001G289800 Sobic001G268200 Sobic001G268200 Sobic001G241100--Sobic001G268200 Sobic006G199200 Sobic006G199200 Sobic001G241100--Sobic006G199200 Sobic010G147100 Sobic010G147100 Sobic001G241100--Sobic010G147100 Sobic001G289600 Sobic001G289600 Sobic001G241100--Sobic001G289600 Sobic001G079200 Sobic001G079200 Sobic001G241100--Sobic001G079200 Sobic003G355900--Sobic002G294800 Sobic002G359400 Sobic002G359400 Sobic003G355900--Sobic002G359400 Sobic001G128300 Sobic001G128300 Sobic003G355900--Sobic001G128300 Sobic003G355900--Sobic001G451400 Sobic003G355900--Sobic001G389100 Sobic009G068500 Sobic009G068500 Sobic003G355900--Sobic009G068500 Sobic003G369400 Sobic003G369400 Sobic003G355900--Sobic003G369400 Sobic005G084800 Sobic005G084800 Sobic003G355900--Sobic005G084800 Sobic003G355900--Sobic009G132700 Sobic009G165700 Sobic009G165700 Sobic002G211800--Sobic009G165700 Sobic007G031900 Sobic007G031900 Sobic002G211800--Sobic007G031900 Sobic002G344000 Sobic002G344000 Sobic002G211800--Sobic002G344000 Sobic003G166750 Sobic003G166750 Sobic002G211800--Sobic003G166750 Sobic004G023000 Sobic004G023000 Sobic002G211800--Sobic004G023000 Sobic002G211800--Sobic009G132700 Sobic003G170900 Sobic003G170900 Sobic002G211800--Sobic003G170900 Sobic002G211800--Sobic002G294800 Sobic003G362600 Sobic003G362600 Sobic002G211800--Sobic003G362600 Sobic005G059800--Sobic010G032900 Sobic005G059800--Sobic002G294800 Sobic006G185100 Sobic006G185100 Sobic005G059800--Sobic006G185100 Sobic001G194200 Sobic001G194200 Sobic005G059800--Sobic001G194200 Sobic003G155100 Sobic003G155100 Sobic005G059800--Sobic003G155100 Sobic003G011300 Sobic003G011300 Sobic005G059800--Sobic003G011300 Sobic008G044100 Sobic008G044100 Sobic005G059800--Sobic008G044100 Sobic008G070800 Sobic008G070800 Sobic005G059800--Sobic008G070800 Sobic003G398700 Sobic003G398700 Sobic005G059800--Sobic003G398700 Sobic009G053900 Sobic009G053900 Sobic001G261501--Sobic009G053900 Sobic002G380200 Sobic002G380200 Sobic001G261501--Sobic002G380200 Sobic001G261501--Sobic009G165700 Sobic003G408600 Sobic003G408600 Sobic001G261501--Sobic003G408600 Sobic001G261501--Sobic005G027400 Sobic001G540400 Sobic001G540400 Sobic001G261501--Sobic001G540400 Sobic007G157000 Sobic007G157000 Sobic001G261501--Sobic007G157000 Sobic003G422500 Sobic003G422500 Sobic001G261501--Sobic003G422500 Sobic007G063000 Sobic007G063000 Sobic001G261501--Sobic007G063000 Sobic010G032900--Sobic005G059800 Sobic010G139000 Sobic010G139000 Sobic010G032900--Sobic010G139000 Sobic010G032900--Sobic003G170900 Sobic010G032900--Sobic001G194200 Sobic001G002000 Sobic001G002000 Sobic010G032900--Sobic001G002000 Sobic010G032900--Sobic003G011300 Sobic004G291900 Sobic004G291900 Sobic010G032900--Sobic004G291900 Sobic010G032900--Sobic002G294800 Sobic002G134200 Sobic002G134200 Sobic010G032900--Sobic002G134200 Sobic001G389100--Sobic001G451400 Sobic003G316500 Sobic003G316500 Sobic001G389100--Sobic003G316500 Sobic001G389100--Sobic009G165700 Sobic001G534700 Sobic001G534700 Sobic001G389100--Sobic001G534700 Sobic010G206900 Sobic010G206900 Sobic001G389100--Sobic010G206900 Sobic010G247800 Sobic010G247800 Sobic001G389100--Sobic010G247800 Sobic001G389100--Sobic009G053900 Sobic001G365900 Sobic001G365900 Sobic001G389100--Sobic001G365900 Sobic002G252800 Sobic002G252800 Sobic001G389100--Sobic002G252800 Sobic010G013200--Sobic001G268200 Sobic008G081300 Sobic008G081300 Sobic010G013200--Sobic008G081300 Sobic002G311100 Sobic002G311100 Sobic010G013200--Sobic002G311100 Sobic001G049500 Sobic001G049500 Sobic010G013200--Sobic001G049500 Sobic010G013200--Sobic002G294800 Sobic006G086500 Sobic006G086500 Sobic010G013200--Sobic006G086500 Sobic009G201300 Sobic009G201300 Sobic010G013200--Sobic009G201300 Sobic009G074400 Sobic009G074400 Sobic010G013200--Sobic009G074400 Sobic010G013200--Sobic010G147100
Octagon: transcription factors


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