Gene annotation
Transcriptome id Sobic.009G074400.1
Synonym Sb09g006270
Functional annotation CK1_CaseinKinase_1a.5 - CK1 includes the casein kinase 1 kinases, expressed
UniProt C5YUK9
Pfam PF00069
Panther DB PTHR11909 PTHR11909:SF73
NCBI CDD KOG1164; Casein kinase (serine/threonine/tyrosine protein kinase)
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G25760 : Protein kinase family protein
RAP-DB (Rice) LOC_Os05g11140.2 : CK1_CaseinKinase_1a.5 - CK1 includes the casein kinase 1 kinases, expressed
MaizeGDB (Corn) Zm00025a035839 , Zm00025a022954 , Zm00025a043148
Brachypodium KQK09697 , KQK07093 , KQK03179
Barley HORVU3Hr1G027270.4 , HORVU3Hr1G027270.7 , HORVU3Hr1G027270.6 , HORVU3Hr1G027270.3 , HORVU3Hr1G027270.2 , HORVU3Hr1G027270.9 , HORVU3Hr1G027270.8 , HORVU3Hr1G027270.11 , HORVU1Hr1G028450.7 , HORVU3Hr1G027270.5 , HORVU3Hr1G027270.1 , HORVU1Hr1G028450.14 , HORVU1Hr1G028450.17 , HORVU1Hr1G028450.10 , HORVU3Hr1G027270.10 , HORVU3Hr1G027270.12 , HORVU1Hr1G028450.15 , HORVU1Hr1G028450.16 , HORVU1Hr1G028450.11 , HORVU1Hr1G028450.12 , HORVU1Hr1G028450.13 , HORVU1Hr1G028450.18 , HORVU1Hr1G028450.19 , HORVU5Hr1G104510.1 , HORVU5Hr1G104510.6 , HORVU5Hr1G104510.7 , HORVU5Hr1G104510.4 , HORVU5Hr1G104510.5 , HORVU5Hr1G104510.8 , HORVU5Hr1G104510.9 , HORVU1Hr1G028450.21 , HORVU1Hr1G028450.20 , HORVU1Hr1G028450.22 , HORVU1Hr1G028450.8 , HORVU1Hr1G028450.9 , HORVU1Hr1G028450.6 , HORVU1Hr1G028450.4 , HORVU1Hr1G028450.5 , HORVU1Hr1G028450.2 , HORVU1Hr1G028450.3 , HORVU1Hr1G028450.1 , HORVU5Hr1G104510.2
Wheat TraesCS5D02G439600 , TraesCS1D02G130400 , TraesCS1D02G130400 , TraesCS1D02G130400 , TraesCS1D02G130400 , TraesCS1B02G143100 , TraesCS1B02G143100 , TraesCS1B02G143100 , TraesCS1B02G143100 , TraesCS1B02G143100 , TraesCS3B02G160600 , TraesCS3B02G160600 , TraesCS3D02G142700 , TraesCS3D02G142700 , TraesCS1A02G123900 , TraesCS1A02G123900 , TraesCS1A02G123900 , TraesCS1A02G123900 , TraesCS1A02G123900 , TraesCS1A02G123900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G316500 expressed protein -
2 Sobic.001G534700 plus-3 domain containing protein, putative, expressed -
3 Sobic.003G155100 suppressor of Mek, putative, expressed K17491: SMEK, protein phosphatase 4 regulatory subunit 3
4 Sobic.003G198800 myosin, putative, expressed K10357: myosin V
5 Sobic.002G311100 zinc finger, C3HC4 type domain containing protein, expressed -
6 Sobic.006G051800 calmodulin-binding transcription activator 4, putative, expressed -
7 Sobic.006G219600 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3
8 Sobic.008G001200 RNA recognition motif containing protein, putative, expressed -
9 Sobic.004G001500 HECT-domain domain containing protein, expressed K10590: E3 ubiquitin-protein ligase TRIP12
10 Sobic.002G146300 cig3, putative, expressed K14409: SMG7, protein SMG7
11 Sobic.002G294800 cyclic nucleotide-gated ion channel, putative, expressed K05391: cyclic nucleotide gated channel, plant
12 Sobic.008G087866 - -
13 Sobic.010G074300 smr domain containing protein, expressed -
14 Sobic.009G053900 HECT-domain domain containing protein, expressed K10589: ubiquitin-protein ligase E3 C
15 Sobic.001G261501 - -
16 Sobic.010G206900 transcription initiation factor TFIID subunit 1, putative, expressed K03125: transcription initiation factor TFIID subunit 1
17 Sobic.001G268200 zinc finger, C3HC4 type domain containing protein, expressed -
18 Sobic.002G383600 zinc finger, C3HC4 type domain containing protein, expressed K12169: KPC1, Kip1 ubiquitination-promoting complex protein 1
19 Sobic.004G231900 ribonuclease protein, putative, expressed K18758: DIS3-like exonuclease 2
20 Sobic.010G139600 STE_PAK_Ste20_STLK.5 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08835: OXSR1, serine/threonine-protein kinase OSR1/STK39


Gene co-expression network
sample Sobic009G074400 Sobic009G074400 Sobic003G316500 Sobic003G316500 Sobic009G074400--Sobic003G316500 Sobic001G534700 Sobic001G534700 Sobic009G074400--Sobic001G534700 Sobic003G155100 Sobic003G155100 Sobic009G074400--Sobic003G155100 Sobic003G198800 Sobic003G198800 Sobic009G074400--Sobic003G198800 Sobic002G311100 Sobic002G311100 Sobic009G074400--Sobic002G311100 Sobic006G051800 Sobic006G051800 Sobic009G074400--Sobic006G051800 Sobic006G219600 Sobic006G219600 Sobic009G074400--Sobic006G219600 Sobic008G001200 Sobic008G001200 Sobic009G074400--Sobic008G001200 Sobic004G001500 Sobic004G001500 Sobic009G074400--Sobic004G001500 Sobic003G316500--Sobic001G534700 Sobic009G053900 Sobic009G053900 Sobic003G316500--Sobic009G053900 Sobic003G316500--Sobic009G074400 Sobic001G389100 Sobic001G389100 Sobic003G316500--Sobic001G389100 Sobic010G147100 Sobic010G147100 Sobic003G316500--Sobic010G147100 Sobic001G365900 Sobic001G365900 Sobic003G316500--Sobic001G365900 Sobic009G165700 Sobic009G165700 Sobic003G316500--Sobic009G165700 Sobic001G451400 Sobic001G451400 Sobic003G316500--Sobic001G451400 Sobic010G206900 Sobic010G206900 Sobic003G316500--Sobic010G206900 Sobic001G534700--Sobic010G206900 Sobic001G534700--Sobic001G365900 Sobic002G411600 Sobic002G411600 Sobic001G534700--Sobic002G411600 Sobic001G534700--Sobic003G316500 Sobic001G534700--Sobic009G165700 Sobic004G034900 Sobic004G034900 Sobic001G534700--Sobic004G034900 Sobic002G008900 Sobic002G008900 Sobic001G534700--Sobic002G008900 Sobic003G422500 Sobic003G422500 Sobic001G534700--Sobic003G422500 Sobic001G534700--Sobic008G001200 Sobic003G155100--Sobic008G001200 Sobic003G155100--Sobic006G219600 Sobic003G155100--Sobic010G206900 Sobic001G230000 Sobic001G230000 Sobic003G155100--Sobic001G230000 Sobic001G375100 Sobic001G375100 Sobic003G155100--Sobic001G375100 Sobic001G194200 Sobic001G194200 Sobic003G155100--Sobic001G194200 Sobic010G010700 Sobic010G010700 Sobic003G155100--Sobic010G010700 Sobic009G256400 Sobic009G256400 Sobic003G155100--Sobic009G256400 Sobic004G291900 Sobic004G291900 Sobic003G155100--Sobic004G291900 Sobic003G198800--Sobic001G534700 Sobic003G198800--Sobic009G074400 Sobic003G275700 Sobic003G275700 Sobic003G198800--Sobic003G275700 Sobic006G257800 Sobic006G257800 Sobic003G198800--Sobic006G257800 Sobic003G198800--Sobic003G155100 Sobic001G128300 Sobic001G128300 Sobic003G198800--Sobic001G128300 Sobic001G481900 Sobic001G481900 Sobic003G198800--Sobic001G481900 Sobic008G151100 Sobic008G151100 Sobic003G198800--Sobic008G151100 Sobic003G198800--Sobic002G411600 Sobic002G311100--Sobic010G147100 Sobic002G311100--Sobic009G074400 Sobic010G013200 Sobic010G013200 Sobic002G311100--Sobic010G013200 Sobic003G264100 Sobic003G264100 Sobic002G311100--Sobic003G264100 Sobic010G131900 Sobic010G131900 Sobic002G311100--Sobic010G131900 Sobic010G074300 Sobic010G074300 Sobic002G311100--Sobic010G074300 Sobic009G143700 Sobic009G143700 Sobic002G311100--Sobic009G143700 Sobic009G201300 Sobic009G201300 Sobic002G311100--Sobic009G201300 Sobic003G195000 Sobic003G195000 Sobic002G311100--Sobic003G195000 Sobic003G029500 Sobic003G029500 Sobic006G051800--Sobic003G029500 Sobic006G051800--Sobic009G074400 Sobic004G231900 Sobic004G231900 Sobic006G051800--Sobic004G231900 Sobic002G383600 Sobic002G383600 Sobic006G051800--Sobic002G383600 Sobic006G051800--Sobic006G219600 Sobic004G189200 Sobic004G189200 Sobic006G051800--Sobic004G189200 Sobic006G051800--Sobic006G257800 Sobic005G201000 Sobic005G201000 Sobic006G051800--Sobic005G201000 Sobic008G167600 Sobic008G167600 Sobic006G051800--Sobic008G167600 Sobic006G219600--Sobic003G155100 Sobic006G219600--Sobic009G201300 Sobic002G124600 Sobic002G124600 Sobic006G219600--Sobic002G124600 Sobic006G050700 Sobic006G050700 Sobic006G219600--Sobic006G050700 Sobic001G298900 Sobic001G298900 Sobic006G219600--Sobic001G298900 Sobic006G133900 Sobic006G133900 Sobic006G219600--Sobic006G133900 Sobic001G133000 Sobic001G133000 Sobic006G219600--Sobic001G133000 Sobic005G106600 Sobic005G106600 Sobic006G219600--Sobic005G106600 Sobic005G084500 Sobic005G084500 Sobic006G219600--Sobic005G084500 Sobic008G001200--Sobic003G155100 Sobic008G001200--Sobic010G206900 Sobic008G001200--Sobic009G256400 Sobic003G205200 Sobic003G205200 Sobic008G001200--Sobic003G205200 Sobic008G001200--Sobic010G010700 Sobic008G001200--Sobic001G194200 Sobic005G001000 Sobic005G001000 Sobic008G001200--Sobic005G001000 Sobic004G276400 Sobic004G276400 Sobic008G001200--Sobic004G276400 Sobic004G174200 Sobic004G174200 Sobic008G001200--Sobic004G174200 Sobic002G146300 Sobic002G146300 Sobic004G001500--Sobic002G146300 Sobic003G043200 Sobic003G043200 Sobic004G001500--Sobic003G043200 Sobic005G187300 Sobic005G187300 Sobic004G001500--Sobic005G187300 Sobic001G370900 Sobic001G370900 Sobic004G001500--Sobic001G370900 Sobic001G457800 Sobic001G457800 Sobic004G001500--Sobic001G457800 Sobic004G001500--Sobic009G256400 Sobic003G166750 Sobic003G166750 Sobic004G001500--Sobic003G166750 Sobic004G356700 Sobic004G356700 Sobic004G001500--Sobic004G356700 Sobic001G527800 Sobic001G527800 Sobic004G001500--Sobic001G527800
Octagon: transcription factors


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