Gene annotation
Transcriptome id Sobic.003G198800.1
Synonym XI-17, ATXIK, XIK, Sb03g026110
Functional annotation myosin, putative, expressed
UniProt C5XPD7
Pfam PF02736 PF00612 PF01843 PF00063
Panther DB PTHR13140 PTHR13140:SF435
NCBI CDD -
KEGG Orthology K10357; myosin V
Gene Ontology GO:0016459; myosin complex GO:0005524ATP binding GO:0003774motor activity GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT5G20490 : Myosin family protein with Dil domain
RAP-DB (Rice) LOC_Os03g48140.1 : myosin, putative, expressed
MaizeGDB (Corn) Zm00025a028507 , Zm00025a049460
Brachypodium KQK01633 , KQK01634 , KQK17926 , KQK08458 , PNT75744 , PNT75743 , KQK17927 , KQK08457 , KQK17928 , KQK17924 , KQK17925
Barley HORVU3Hr1G050290.19 , HORVU3Hr1G050290.18 , HORVU3Hr1G050290.15 , HORVU3Hr1G050290.14 , HORVU3Hr1G050290.17 , HORVU3Hr1G050290.16 , HORVU3Hr1G050290.11 , HORVU3Hr1G050290.10 , HORVU3Hr1G050290.13 , HORVU3Hr1G050290.12 , HORVU3Hr1G050290.33 , HORVU3Hr1G050290.32 , HORVU3Hr1G050290.31 , HORVU3Hr1G050290.30 , HORVU3Hr1G050290.34 , HORVU3Hr1G050290.9 , HORVU3Hr1G050290.8 , HORVU3Hr1G050290.1 , HORVU3Hr1G050290.3 , HORVU3Hr1G050290.2 , HORVU3Hr1G050290.5 , HORVU3Hr1G050290.4 , HORVU3Hr1G050290.7 , HORVU3Hr1G050290.6 , HORVU3Hr1G050290.28 , HORVU3Hr1G050290.29 , HORVU3Hr1G050290.20 , HORVU3Hr1G050290.21 , HORVU3Hr1G050290.22 , HORVU3Hr1G050290.23 , HORVU3Hr1G050290.24 , HORVU3Hr1G050290.25 , HORVU3Hr1G050290.26 , HORVU3Hr1G050290.27
Wheat TraesCS3A02G228400 , TraesCS3D02G212400 , TraesCS3D02G212400 , TraesCS3D02G212400 , TraesCS3B02G239700 , TraesCS3B02G239700 , TraesCS3A02G209500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G534700 plus-3 domain containing protein, putative, expressed -
2 Sobic.009G074400 CK1_CaseinKinase_1a.5 - CK1 includes the casein kinase 1 kinases, expressed -
3 Sobic.003G275700 myosin head family protein, expressed K10357: myosin V
4 Sobic.006G257800 actin-6, putative, expressed K16616: actin-related protein 8, plant
5 Sobic.003G155100 suppressor of Mek, putative, expressed K17491: SMEK, protein phosphatase 4 regulatory subunit 3
6 Sobic.001G128300 chloride channel protein CLC-d, putative, expressed K05016: chloride channel 7
7 Sobic.001G481900 SAC domain containing protein, putative, expressed -
8 Sobic.008G151100 protein kinase domain containing protein, expressed -
9 Sobic.002G411600 CW-type Zinc Finger, putative, expressed -
10 Sobic.002G187700 expressed protein -
11 Sobic.003G316500 expressed protein -
12 Sobic.003G115900 lissencephaly type-1-like homology motif, putative, expressed -
13 Sobic.006G002300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.003G191700 ELF3 protein, putative, expressed K12125: protein EARLY FLOWERING 3
15 Sobic.003G229300 NLI interacting factor-like phosphatase, putative, expressed K17616: CTD small phosphatase-like protein 2
16 Sobic.001G043100 EMB1745, putative, expressed K18723: nucleoporin GLE1
17 Sobic.009G238000 suppressor of phythchrome A, putative, expressed K16240: protein suppressor of PHYA-105 1
18 Sobic.006G219600 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3
19 Sobic.001G381600 phospholipid-transporting ATPase, putative, expressed K14802: DRS2, phospholipid-transporting ATPase
20 Sobic.003G301900 phosphatidate cytidylyltransferase, putative, expressed K00981: E2.7.7.41, CDS1, CDS2, phosphatidate cytidylyltransferase


Gene co-expression network
sample Sobic003G198800 Sobic003G198800 Sobic001G534700 Sobic001G534700 Sobic003G198800--Sobic001G534700 Sobic009G074400 Sobic009G074400 Sobic003G198800--Sobic009G074400 Sobic003G275700 Sobic003G275700 Sobic003G198800--Sobic003G275700 Sobic006G257800 Sobic006G257800 Sobic003G198800--Sobic006G257800 Sobic003G155100 Sobic003G155100 Sobic003G198800--Sobic003G155100 Sobic001G128300 Sobic001G128300 Sobic003G198800--Sobic001G128300 Sobic001G481900 Sobic001G481900 Sobic003G198800--Sobic001G481900 Sobic008G151100 Sobic008G151100 Sobic003G198800--Sobic008G151100 Sobic002G411600 Sobic002G411600 Sobic003G198800--Sobic002G411600 Sobic010G206900 Sobic010G206900 Sobic001G534700--Sobic010G206900 Sobic001G365900 Sobic001G365900 Sobic001G534700--Sobic001G365900 Sobic001G534700--Sobic002G411600 Sobic003G316500 Sobic003G316500 Sobic001G534700--Sobic003G316500 Sobic009G165700 Sobic009G165700 Sobic001G534700--Sobic009G165700 Sobic004G034900 Sobic004G034900 Sobic001G534700--Sobic004G034900 Sobic002G008900 Sobic002G008900 Sobic001G534700--Sobic002G008900 Sobic003G422500 Sobic003G422500 Sobic001G534700--Sobic003G422500 Sobic008G001200 Sobic008G001200 Sobic001G534700--Sobic008G001200 Sobic009G074400--Sobic003G316500 Sobic009G074400--Sobic001G534700 Sobic009G074400--Sobic003G155100 Sobic009G074400--Sobic003G198800 Sobic002G311100 Sobic002G311100 Sobic009G074400--Sobic002G311100 Sobic006G051800 Sobic006G051800 Sobic009G074400--Sobic006G051800 Sobic006G219600 Sobic006G219600 Sobic009G074400--Sobic006G219600 Sobic009G074400--Sobic008G001200 Sobic004G001500 Sobic004G001500 Sobic009G074400--Sobic004G001500 Sobic003G275700--Sobic003G198800 Sobic006G142775 Sobic006G142775 Sobic003G275700--Sobic006G142775 Sobic003G275700--Sobic001G534700 Sobic003G275700--Sobic009G165700 Sobic001G043100 Sobic001G043100 Sobic003G275700--Sobic001G043100 Sobic001G389100 Sobic001G389100 Sobic003G275700--Sobic001G389100 Sobic001G451400 Sobic001G451400 Sobic003G275700--Sobic001G451400 Sobic003G275700--Sobic010G206900 Sobic009G053900 Sobic009G053900 Sobic003G275700--Sobic009G053900 Sobic008G167600 Sobic008G167600 Sobic006G257800--Sobic008G167600 Sobic004G189200 Sobic004G189200 Sobic006G257800--Sobic004G189200 Sobic006G257800--Sobic003G198800 Sobic002G383600 Sobic002G383600 Sobic006G257800--Sobic002G383600 Sobic001G062300 Sobic001G062300 Sobic006G257800--Sobic001G062300 Sobic010G177400 Sobic010G177400 Sobic006G257800--Sobic010G177400 Sobic002G295100 Sobic002G295100 Sobic006G257800--Sobic002G295100 Sobic006G257800--Sobic006G051800 Sobic002G341000 Sobic002G341000 Sobic006G257800--Sobic002G341000 Sobic003G155100--Sobic008G001200 Sobic003G155100--Sobic006G219600 Sobic003G155100--Sobic010G206900 Sobic001G230000 Sobic001G230000 Sobic003G155100--Sobic001G230000 Sobic001G375100 Sobic001G375100 Sobic003G155100--Sobic001G375100 Sobic001G194200 Sobic001G194200 Sobic003G155100--Sobic001G194200 Sobic010G010700 Sobic010G010700 Sobic003G155100--Sobic010G010700 Sobic009G256400 Sobic009G256400 Sobic003G155100--Sobic009G256400 Sobic004G291900 Sobic004G291900 Sobic003G155100--Sobic004G291900 Sobic001G128300--Sobic009G165700 Sobic001G128300--Sobic001G451400 Sobic001G251200 Sobic001G251200 Sobic001G128300--Sobic001G251200 Sobic004G091100 Sobic004G091100 Sobic001G128300--Sobic004G091100 Sobic001G128300--Sobic001G043100 Sobic009G109925 Sobic009G109925 Sobic001G128300--Sobic009G109925 Sobic001G128300--Sobic003G198800 Sobic001G441400 Sobic001G441400 Sobic001G128300--Sobic001G441400 Sobic002G211800 Sobic002G211800 Sobic001G128300--Sobic002G211800 Sobic002G187700 Sobic002G187700 Sobic001G481900--Sobic002G187700 Sobic004G306500 Sobic004G306500 Sobic001G481900--Sobic004G306500 Sobic001G481900--Sobic003G198800 Sobic003G372500 Sobic003G372500 Sobic001G481900--Sobic003G372500 Sobic010G147100 Sobic010G147100 Sobic001G481900--Sobic010G147100 Sobic003G115900 Sobic003G115900 Sobic001G481900--Sobic003G115900 Sobic008G059100 Sobic008G059100 Sobic001G481900--Sobic008G059100 Sobic001G481900--Sobic001G128300 Sobic007G164000 Sobic007G164000 Sobic001G481900--Sobic007G164000 Sobic008G151100--Sobic003G198800 Sobic001G381600 Sobic001G381600 Sobic008G151100--Sobic001G381600 Sobic001G212300 Sobic001G212300 Sobic008G151100--Sobic001G212300 Sobic003G191700 Sobic003G191700 Sobic008G151100--Sobic003G191700 Sobic009G238000 Sobic009G238000 Sobic008G151100--Sobic009G238000 Sobic005G045000 Sobic005G045000 Sobic008G151100--Sobic005G045000 Sobic010G097600 Sobic010G097600 Sobic008G151100--Sobic010G097600 Sobic003G229300 Sobic003G229300 Sobic008G151100--Sobic003G229300 Sobic007G198300 Sobic007G198300 Sobic008G151100--Sobic007G198300 Sobic009G191000 Sobic009G191000 Sobic002G411600--Sobic009G191000 Sobic002G411600--Sobic003G422500 Sobic002G411600--Sobic010G206900 Sobic002G411600--Sobic002G008900 Sobic002G411600--Sobic004G034900 Sobic004G174200 Sobic004G174200 Sobic002G411600--Sobic004G174200 Sobic010G247800 Sobic010G247800 Sobic002G411600--Sobic010G247800 Sobic002G411600--Sobic001G534700 Sobic003G101400 Sobic003G101400 Sobic002G411600--Sobic003G101400
Octagon: transcription factors


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