Gene annotation
Transcriptome id Sobic.001G381600.1
Synonym ALA1, Sb01g036200
Functional annotation phospholipid-transporting ATPase, putative, expressed
UniProt C5X0U1
Pfam PF00122 PF12710 PF16209 PF16212
Panther DB PTHR24092 PTHR24092:SF74
NCBI CDD -
KEGG Orthology K14802; DRS2, phospholipid-transporting ATPase
Gene Ontology GO:0000166; nucleotide binding GO:0016021integral component of membrane GO:0015914phospholipid transport GO:0005524ATP binding GO:0000287magnesium ion binding


Orthologs (automatic annotation)
TAIR AT5G04930 : aminophospholipid ATPase 1
RAP-DB (Rice) LOC_Os03g21680.2 : phospholipid-transporting ATPase, putative, expressed
MaizeGDB (Corn) Zm00025a052428 , Zm00025a002343
Brachypodium KQK21805 , KQK21806 , PNT77463
Barley HORVU4Hr1G050400.7 , HORVU4Hr1G050400.6 , HORVU4Hr1G050400.5 , HORVU4Hr1G050400.4 , HORVU4Hr1G050400.3 , HORVU4Hr1G050400.2 , HORVU4Hr1G050400.1
Wheat TraesCS4D02G172400 , TraesCS4D02G172400 , TraesCS4A02G134800 , TraesCS4A02G134800 , TraesCS4B02G170400 , TraesCS4B02G170400 , TraesCS4B02G170400
Populus PNT22118 , PNT22119 , PNT22117


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G151100 protein kinase domain containing protein, expressed -
2 Sobic.009G201300 - -
3 Sobic.007G198300 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
4 Sobic.006G002300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.003G115900 lissencephaly type-1-like homology motif, putative, expressed -
6 Sobic.001G212300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@myosin-2 heavy chain, non muscle, putative, expressed -
7 Sobic.009G038900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@CGMC_MAPKCGMC_2.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
8 Sobic.003G198800 myosin, putative, expressed K10357: myosin V
9 Sobic.003G155100 suppressor of Mek, putative, expressed K17491: SMEK, protein phosphatase 4 regulatory subunit 3
10 Sobic.004G042200 OsFBO8 - F-box and other domain containing protein, expressed K12115: clock-associated PAS protein ZTL
11 Sobic.004G174200 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12813: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
12 Sobic.003G191700 ELF3 protein, putative, expressed K12125: protein EARLY FLOWERING 3
13 Sobic.006G219600 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3
14 Sobic.001G534700 plus-3 domain containing protein, putative, expressed -
15 Sobic.008G001200 RNA recognition motif containing protein, putative, expressed -
16 Sobic.004G281800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@myb-like DNA-binding domain containing protein, expressed -
17 Sobic.001G111850 - -
18 Sobic.003G119600 zinc finger, C3HC4 type domain containing protein, expressed -
19 Sobic.003G011300 expressed protein K12617: PATL1, DNA topoisomerase 2-associated protein PAT1
20 Sobic.006G050700 disease resistance RPP13-like protein 1, putative, expressed -


Gene co-expression network
sample Sobic001G381600 Sobic001G381600 Sobic008G151100 Sobic008G151100 Sobic001G381600--Sobic008G151100 Sobic009G201300 Sobic009G201300 Sobic001G381600--Sobic009G201300 Sobic007G198300 Sobic007G198300 Sobic001G381600--Sobic007G198300 Sobic006G002300 Sobic006G002300 Sobic001G381600--Sobic006G002300 Sobic003G115900 Sobic003G115900 Sobic001G381600--Sobic003G115900 Sobic001G212300 Sobic001G212300 Sobic001G381600--Sobic001G212300 Sobic009G038900 Sobic009G038900 Sobic001G381600--Sobic009G038900 Sobic003G198800 Sobic003G198800 Sobic001G381600--Sobic003G198800 Sobic003G155100 Sobic003G155100 Sobic001G381600--Sobic003G155100 Sobic008G151100--Sobic003G198800 Sobic008G151100--Sobic001G381600 Sobic008G151100--Sobic001G212300 Sobic003G191700 Sobic003G191700 Sobic008G151100--Sobic003G191700 Sobic009G238000 Sobic009G238000 Sobic008G151100--Sobic009G238000 Sobic005G045000 Sobic005G045000 Sobic008G151100--Sobic005G045000 Sobic010G097600 Sobic010G097600 Sobic008G151100--Sobic010G097600 Sobic003G229300 Sobic003G229300 Sobic008G151100--Sobic003G229300 Sobic008G151100--Sobic007G198300 Sobic006G219600 Sobic006G219600 Sobic009G201300--Sobic006G219600 Sobic009G201300--Sobic003G155100 Sobic006G050700 Sobic006G050700 Sobic009G201300--Sobic006G050700 Sobic003G119600 Sobic003G119600 Sobic009G201300--Sobic003G119600 Sobic004G244900 Sobic004G244900 Sobic009G201300--Sobic004G244900 Sobic001G133000 Sobic001G133000 Sobic009G201300--Sobic001G133000 Sobic008G001200 Sobic008G001200 Sobic009G201300--Sobic008G001200 Sobic001G457800 Sobic001G457800 Sobic009G201300--Sobic001G457800 Sobic002G211800 Sobic002G211800 Sobic009G201300--Sobic002G211800 Sobic001G375100 Sobic001G375100 Sobic007G198300--Sobic001G375100 Sobic007G198300--Sobic003G155100 Sobic008G130100 Sobic008G130100 Sobic007G198300--Sobic008G130100 Sobic007G198300--Sobic003G191700 Sobic007G198300--Sobic009G038900 Sobic007G198300--Sobic003G229300 Sobic007G198300--Sobic006G219600 Sobic006G133900 Sobic006G133900 Sobic007G198300--Sobic006G133900 Sobic007G198300--Sobic001G381600 Sobic006G002300--Sobic003G198800 Sobic006G002300--Sobic001G381600 Sobic002G187700 Sobic002G187700 Sobic006G002300--Sobic002G187700 Sobic006G002300--Sobic003G115900 Sobic002G128200 Sobic002G128200 Sobic006G002300--Sobic002G128200 Sobic006G002300--Sobic007G198300 Sobic003G301900 Sobic003G301900 Sobic006G002300--Sobic003G301900 Sobic006G002300--Sobic003G229300 Sobic006G002300--Sobic001G375100 Sobic003G115900--Sobic002G187700 Sobic003G115900--Sobic003G198800 Sobic003G115900--Sobic001G381600 Sobic003G115900--Sobic006G002300 Sobic004G091100 Sobic004G091100 Sobic003G115900--Sobic004G091100 Sobic009G074400 Sobic009G074400 Sobic003G115900--Sobic009G074400 Sobic001G481900 Sobic001G481900 Sobic003G115900--Sobic001G481900 Sobic001G107600 Sobic001G107600 Sobic003G115900--Sobic001G107600 Sobic010G139600 Sobic010G139600 Sobic003G115900--Sobic010G139600 Sobic001G212300--Sobic008G151100 Sobic001G212300--Sobic003G191700 Sobic001G212300--Sobic009G038900 Sobic004G042200 Sobic004G042200 Sobic001G212300--Sobic004G042200 Sobic004G355700 Sobic004G355700 Sobic001G212300--Sobic004G355700 Sobic001G212300--Sobic001G381600 Sobic003G313300 Sobic003G313300 Sobic001G212300--Sobic003G313300 Sobic001G212300--Sobic007G198300 Sobic001G374100 Sobic001G374100 Sobic001G212300--Sobic001G374100 Sobic004G281800 Sobic004G281800 Sobic009G038900--Sobic004G281800 Sobic005G101200 Sobic005G101200 Sobic009G038900--Sobic005G101200 Sobic005G106600 Sobic005G106600 Sobic009G038900--Sobic005G106600 Sobic005G068700 Sobic005G068700 Sobic009G038900--Sobic005G068700 Sobic009G038900--Sobic004G042200 Sobic003G220100 Sobic003G220100 Sobic009G038900--Sobic003G220100 Sobic001G333800 Sobic001G333800 Sobic009G038900--Sobic001G333800 Sobic001G359300 Sobic001G359300 Sobic009G038900--Sobic001G359300 Sobic010G085100 Sobic010G085100 Sobic009G038900--Sobic010G085100 Sobic001G534700 Sobic001G534700 Sobic003G198800--Sobic001G534700 Sobic003G198800--Sobic009G074400 Sobic003G275700 Sobic003G275700 Sobic003G198800--Sobic003G275700 Sobic006G257800 Sobic006G257800 Sobic003G198800--Sobic006G257800 Sobic003G198800--Sobic003G155100 Sobic001G128300 Sobic001G128300 Sobic003G198800--Sobic001G128300 Sobic003G198800--Sobic001G481900 Sobic003G198800--Sobic008G151100 Sobic002G411600 Sobic002G411600 Sobic003G198800--Sobic002G411600 Sobic003G155100--Sobic008G001200 Sobic003G155100--Sobic006G219600 Sobic010G206900 Sobic010G206900 Sobic003G155100--Sobic010G206900 Sobic001G230000 Sobic001G230000 Sobic003G155100--Sobic001G230000 Sobic003G155100--Sobic001G375100 Sobic001G194200 Sobic001G194200 Sobic003G155100--Sobic001G194200 Sobic010G010700 Sobic010G010700 Sobic003G155100--Sobic010G010700 Sobic009G256400 Sobic009G256400 Sobic003G155100--Sobic009G256400 Sobic004G291900 Sobic004G291900 Sobic003G155100--Sobic004G291900
Octagon: transcription factors


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