Gene annotation
Transcriptome id Sobic.007G198300.2,Sobic.007G198300.1
Synonym Sb07g026650
Functional annotation endonuclease/exonuclease/phosphatase family domain containing protein, expressed
UniProt A0A1Z5RAS9 , C5YI66
Pfam PF03372
Panther DB PTHR11200 PTHR11200:SF133
NCBI CDD KOG0565; Inositol polyphosphate 5-phosphatase and related proteins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G43900 : Endonuclease/exonuclease/phosphatase family protein
RAP-DB (Rice) LOC_Os08g41270.1 : endonuclease/exonuclease/phosphatase family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a005196 , Zm00025a047539 , Zm00025a030373 , Zm00025a014271
Brachypodium PNT68462 , KQJ90874 , KQJ90873 , KQJ99060
Barley HORVU5Hr1G075330.15 , HORVU5Hr1G075330.11 , HORVU5Hr1G075330.13 , HORVU5Hr1G075330.18 , HORVU5Hr1G075330.1 , HORVU5Hr1G075330.3 , HORVU5Hr1G075330.2 , HORVU5Hr1G075330.5 , HORVU5Hr1G075330.4 , HORVU5Hr1G075330.7 , HORVU5Hr1G075330.6 , HORVU5Hr1G075330.17 , HORVU5Hr1G075330.16 , HORVU7Hr1G052740.10 , HORVU5Hr1G075330.12 , HORVU7Hr1G052740.5 , HORVU7Hr1G052740.4 , HORVU7Hr1G052740.7 , HORVU7Hr1G052740.6 , HORVU7Hr1G052740.3 , HORVU7Hr1G052740.2 , HORVU7Hr1G052740.9 , HORVU7Hr1G052740.8
Wheat TraesCS7D02G253900 , TraesCS7D02G253900 , TraesCS7A02G255500 , TraesCS7A02G255500 , TraesCS5D02G285100 , TraesCS5D02G285100 , TraesCS5B02G277500 , TraesCS7B02G151900 , TraesCS7B02G151900 , TraesCS5A02G278100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G375100 AAA-type ATPase family protein, putative, expressed -
2 Sobic.003G155100 suppressor of Mek, putative, expressed K17491: SMEK, protein phosphatase 4 regulatory subunit 3
3 Sobic.008G130100 protein kinase family protein, putative, expressed -
4 Sobic.003G191700 ELF3 protein, putative, expressed K12125: protein EARLY FLOWERING 3
5 Sobic.009G038900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@CGMC_MAPKCGMC_2.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
6 Sobic.003G229300 NLI interacting factor-like phosphatase, putative, expressed K17616: CTD small phosphatase-like protein 2
7 Sobic.006G219600 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3
8 Sobic.006G133900 NIN, putative, expressed -
9 Sobic.001G381600 phospholipid-transporting ATPase, putative, expressed K14802: DRS2, phospholipid-transporting ATPase
10 Sobic.003G370700 regulation of Al tolerance genes and proton tolerance genes(PubMedID : 29541086)@ZOS1-18 - C2H2 zinc finger protein, expressed -
11 Sobic.001G454500 potyvirus VPg interacting protein, putative, expressed -
12 Sobic.006G002300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.004G042200 OsFBO8 - F-box and other domain containing protein, expressed K12115: clock-associated PAS protein ZTL
14 Sobic.003G313300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plus-3 domain containing protein, expressed -
15 Sobic.001G365900 PWWP domain containing protein, expressed -
16 Sobic.002G104100 FYVE zinc finger domain containing protein, expressed -
17 Sobic.001G534700 plus-3 domain containing protein, putative, expressed -
18 Sobic.004G034900 histone acetyltransferase HAC1, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
19 Sobic.010G010700 PHD-finger family protein, expressed -
20 Sobic.003G017100 ABC transporter, ATP-binding protein, putative, expressed -


Gene co-expression network
sample Sobic007G198300 Sobic007G198300 Sobic001G375100 Sobic001G375100 Sobic007G198300--Sobic001G375100 Sobic003G155100 Sobic003G155100 Sobic007G198300--Sobic003G155100 Sobic008G130100 Sobic008G130100 Sobic007G198300--Sobic008G130100 Sobic003G191700 Sobic003G191700 Sobic007G198300--Sobic003G191700 Sobic009G038900 Sobic009G038900 Sobic007G198300--Sobic009G038900 Sobic003G229300 Sobic003G229300 Sobic007G198300--Sobic003G229300 Sobic006G219600 Sobic006G219600 Sobic007G198300--Sobic006G219600 Sobic006G133900 Sobic006G133900 Sobic007G198300--Sobic006G133900 Sobic001G381600 Sobic001G381600 Sobic007G198300--Sobic001G381600 Sobic001G375100--Sobic003G155100 Sobic008G001200 Sobic008G001200 Sobic001G375100--Sobic008G001200 Sobic005G149200 Sobic005G149200 Sobic001G375100--Sobic005G149200 Sobic003G247500 Sobic003G247500 Sobic001G375100--Sobic003G247500 Sobic001G454500 Sobic001G454500 Sobic001G375100--Sobic001G454500 Sobic010G010700 Sobic010G010700 Sobic001G375100--Sobic010G010700 Sobic002G008900 Sobic002G008900 Sobic001G375100--Sobic002G008900 Sobic001G375100--Sobic007G198300 Sobic005G001000 Sobic005G001000 Sobic001G375100--Sobic005G001000 Sobic003G155100--Sobic008G001200 Sobic003G155100--Sobic006G219600 Sobic010G206900 Sobic010G206900 Sobic003G155100--Sobic010G206900 Sobic001G230000 Sobic001G230000 Sobic003G155100--Sobic001G230000 Sobic003G155100--Sobic001G375100 Sobic001G194200 Sobic001G194200 Sobic003G155100--Sobic001G194200 Sobic003G155100--Sobic010G010700 Sobic009G256400 Sobic009G256400 Sobic003G155100--Sobic009G256400 Sobic004G291900 Sobic004G291900 Sobic003G155100--Sobic004G291900 Sobic001G365900 Sobic001G365900 Sobic008G130100--Sobic001G365900 Sobic008G130100--Sobic001G454500 Sobic008G130100--Sobic006G133900 Sobic008G130100--Sobic010G010700 Sobic008G130100--Sobic003G155100 Sobic004G034900 Sobic004G034900 Sobic008G130100--Sobic004G034900 Sobic002G346200 Sobic002G346200 Sobic008G130100--Sobic002G346200 Sobic008G130100--Sobic010G206900 Sobic008G130100--Sobic007G198300 Sobic004G042200 Sobic004G042200 Sobic003G191700--Sobic004G042200 Sobic003G313300 Sobic003G313300 Sobic003G191700--Sobic003G313300 Sobic003G191700--Sobic006G133900 Sobic003G191700--Sobic003G229300 Sobic003G017100 Sobic003G017100 Sobic003G191700--Sobic003G017100 Sobic003G191700--Sobic009G038900 Sobic003G191700--Sobic007G198300 Sobic003G191700--Sobic003G155100 Sobic010G002700 Sobic010G002700 Sobic003G191700--Sobic010G002700 Sobic004G281800 Sobic004G281800 Sobic009G038900--Sobic004G281800 Sobic005G101200 Sobic005G101200 Sobic009G038900--Sobic005G101200 Sobic005G106600 Sobic005G106600 Sobic009G038900--Sobic005G106600 Sobic005G068700 Sobic005G068700 Sobic009G038900--Sobic005G068700 Sobic009G038900--Sobic004G042200 Sobic003G220100 Sobic003G220100 Sobic009G038900--Sobic003G220100 Sobic001G333800 Sobic001G333800 Sobic009G038900--Sobic001G333800 Sobic001G359300 Sobic001G359300 Sobic009G038900--Sobic001G359300 Sobic010G085100 Sobic010G085100 Sobic009G038900--Sobic010G085100 Sobic003G229300--Sobic003G191700 Sobic010G176200 Sobic010G176200 Sobic003G229300--Sobic010G176200 Sobic003G229300--Sobic006G133900 Sobic003G229300--Sobic004G042200 Sobic001G169900 Sobic001G169900 Sobic003G229300--Sobic001G169900 Sobic008G115900 Sobic008G115900 Sobic003G229300--Sobic008G115900 Sobic003G229300--Sobic007G198300 Sobic003G262200 Sobic003G262200 Sobic003G229300--Sobic003G262200 Sobic003G222900 Sobic003G222900 Sobic003G229300--Sobic003G222900 Sobic006G219600--Sobic003G155100 Sobic009G201300 Sobic009G201300 Sobic006G219600--Sobic009G201300 Sobic002G124600 Sobic002G124600 Sobic006G219600--Sobic002G124600 Sobic006G050700 Sobic006G050700 Sobic006G219600--Sobic006G050700 Sobic001G298900 Sobic001G298900 Sobic006G219600--Sobic001G298900 Sobic006G219600--Sobic006G133900 Sobic001G133000 Sobic001G133000 Sobic006G219600--Sobic001G133000 Sobic006G219600--Sobic005G106600 Sobic005G084500 Sobic005G084500 Sobic006G219600--Sobic005G084500 Sobic004G181600 Sobic004G181600 Sobic006G133900--Sobic004G181600 Sobic006G133900--Sobic001G454500 Sobic006G133900--Sobic003G155100 Sobic006G133900--Sobic006G219600 Sobic003G370700 Sobic003G370700 Sobic006G133900--Sobic003G370700 Sobic002G104100 Sobic002G104100 Sobic006G133900--Sobic002G104100 Sobic006G133900--Sobic008G130100 Sobic006G065600 Sobic006G065600 Sobic006G133900--Sobic006G065600 Sobic006G133900--Sobic003G191700 Sobic008G151100 Sobic008G151100 Sobic001G381600--Sobic008G151100 Sobic001G381600--Sobic009G201300 Sobic001G381600--Sobic007G198300 Sobic006G002300 Sobic006G002300 Sobic001G381600--Sobic006G002300 Sobic003G115900 Sobic003G115900 Sobic001G381600--Sobic003G115900 Sobic001G212300 Sobic001G212300 Sobic001G381600--Sobic001G212300 Sobic001G381600--Sobic009G038900 Sobic003G198800 Sobic003G198800 Sobic001G381600--Sobic003G198800 Sobic001G381600--Sobic003G155100
Octagon: transcription factors


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