Gene annotation
Transcriptome id Sobic.006G133900.1
Synonym Sb06g021370
Functional annotation NIN, putative, expressed
UniProt A0A1B6PLS3
Pfam PF00564 PF02042
Panther DB PTHR32002 PTHR32002:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G59580 : Plant regulator RWP-RK family protein
RAP-DB (Rice) LOC_Os04g41850.1 : NIN, putative, expressed
MaizeGDB (Corn) Zm00025a010831 , Zm00025a056378
Brachypodium -
Barley -
Wheat TraesCS2D02G350400 , TraesCS2B02G370400 , TraesCS2A02G352400 , TraesCS2A02G352400 , TraesCS2B02G370400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G181600 calmodulin binding protein, putative, expressed -
2 Sobic.001G454500 potyvirus VPg interacting protein, putative, expressed -
3 Sobic.003G155100 suppressor of Mek, putative, expressed K17491: SMEK, protein phosphatase 4 regulatory subunit 3
4 Sobic.006G219600 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3
5 Sobic.003G370700 regulation of Al tolerance genes and proton tolerance genes(PubMedID : 29541086)@ZOS1-18 - C2H2 zinc finger protein, expressed -
6 Sobic.002G104100 FYVE zinc finger domain containing protein, expressed -
7 Sobic.008G130100 protein kinase family protein, putative, expressed -
8 Sobic.006G065600 expressed protein -
9 Sobic.003G191700 ELF3 protein, putative, expressed K12125: protein EARLY FLOWERING 3
10 Sobic.003G220100 - -
11 Sobic.001G365900 PWWP domain containing protein, expressed -
12 Sobic.001G333800 MYB family transcription factor, putative, expressed -
13 Sobic.001G169900 seed maturation protein PM23, putative, expressed -
14 Sobic.010G002700 expressed protein -
15 Sobic.001G133000 expressed protein -
16 Sobic.004G042200 OsFBO8 - F-box and other domain containing protein, expressed K12115: clock-associated PAS protein ZTL
17 Sobic.007G167100 expressed protein K19373: DnaJ homolog subfamily C member 28
18 Sobic.001G375100 AAA-type ATPase family protein, putative, expressed -
19 Sobic.003G229300 NLI interacting factor-like phosphatase, putative, expressed K17616: CTD small phosphatase-like protein 2
20 Sobic.003G247500 expressed protein -


Gene co-expression network
sample Sobic006G133900 Sobic006G133900 Sobic004G181600 Sobic004G181600 Sobic006G133900--Sobic004G181600 Sobic001G454500 Sobic001G454500 Sobic006G133900--Sobic001G454500 Sobic003G155100 Sobic003G155100 Sobic006G133900--Sobic003G155100 Sobic006G219600 Sobic006G219600 Sobic006G133900--Sobic006G219600 Sobic003G370700 Sobic003G370700 Sobic006G133900--Sobic003G370700 Sobic002G104100 Sobic002G104100 Sobic006G133900--Sobic002G104100 Sobic008G130100 Sobic008G130100 Sobic006G133900--Sobic008G130100 Sobic006G065600 Sobic006G065600 Sobic006G133900--Sobic006G065600 Sobic003G191700 Sobic003G191700 Sobic006G133900--Sobic003G191700 Sobic004G181600--Sobic006G133900 Sobic004G181600--Sobic006G065600 Sobic004G181600--Sobic002G104100 Sobic005G075100 Sobic005G075100 Sobic004G181600--Sobic005G075100 Sobic007G167100 Sobic007G167100 Sobic004G181600--Sobic007G167100 Sobic004G181600--Sobic008G130100 Sobic004G181600--Sobic006G219600 Sobic004G181600--Sobic003G155100 Sobic004G178500 Sobic004G178500 Sobic004G181600--Sobic004G178500 Sobic003G388100 Sobic003G388100 Sobic001G454500--Sobic003G388100 Sobic001G454500--Sobic008G130100 Sobic001G454500--Sobic006G133900 Sobic001G375100 Sobic001G375100 Sobic001G454500--Sobic001G375100 Sobic001G365900 Sobic001G365900 Sobic001G454500--Sobic001G365900 Sobic008G001200 Sobic008G001200 Sobic001G454500--Sobic008G001200 Sobic010G010700 Sobic010G010700 Sobic001G454500--Sobic010G010700 Sobic001G454500--Sobic003G155100 Sobic003G247500 Sobic003G247500 Sobic001G454500--Sobic003G247500 Sobic003G155100--Sobic008G001200 Sobic003G155100--Sobic006G219600 Sobic010G206900 Sobic010G206900 Sobic003G155100--Sobic010G206900 Sobic001G230000 Sobic001G230000 Sobic003G155100--Sobic001G230000 Sobic003G155100--Sobic001G375100 Sobic001G194200 Sobic001G194200 Sobic003G155100--Sobic001G194200 Sobic003G155100--Sobic010G010700 Sobic009G256400 Sobic009G256400 Sobic003G155100--Sobic009G256400 Sobic004G291900 Sobic004G291900 Sobic003G155100--Sobic004G291900 Sobic006G219600--Sobic003G155100 Sobic009G201300 Sobic009G201300 Sobic006G219600--Sobic009G201300 Sobic002G124600 Sobic002G124600 Sobic006G219600--Sobic002G124600 Sobic006G050700 Sobic006G050700 Sobic006G219600--Sobic006G050700 Sobic001G298900 Sobic001G298900 Sobic006G219600--Sobic001G298900 Sobic006G219600--Sobic006G133900 Sobic001G133000 Sobic001G133000 Sobic006G219600--Sobic001G133000 Sobic005G106600 Sobic005G106600 Sobic006G219600--Sobic005G106600 Sobic005G084500 Sobic005G084500 Sobic006G219600--Sobic005G084500 Sobic003G370700--Sobic006G133900 Sobic001G333800 Sobic001G333800 Sobic003G370700--Sobic001G333800 Sobic003G370700--Sobic002G104100 Sobic003G370700--Sobic004G181600 Sobic003G229300 Sobic003G229300 Sobic003G370700--Sobic003G229300 Sobic003G370700--Sobic003G191700 Sobic009G038900 Sobic009G038900 Sobic003G370700--Sobic009G038900 Sobic003G370700--Sobic005G106600 Sobic007G198300 Sobic007G198300 Sobic003G370700--Sobic007G198300 Sobic002G104100--Sobic004G181600 Sobic002G104100--Sobic006G133900 Sobic002G104100--Sobic006G065600 Sobic004G164400 Sobic004G164400 Sobic002G104100--Sobic004G164400 Sobic002G104100--Sobic003G370700 Sobic001G169900 Sobic001G169900 Sobic002G104100--Sobic001G169900 Sobic010G248700 Sobic010G248700 Sobic002G104100--Sobic010G248700 Sobic002G104100--Sobic001G365900 Sobic006G182900 Sobic006G182900 Sobic002G104100--Sobic006G182900 Sobic008G130100--Sobic001G365900 Sobic008G130100--Sobic001G454500 Sobic008G130100--Sobic006G133900 Sobic008G130100--Sobic010G010700 Sobic008G130100--Sobic003G155100 Sobic004G034900 Sobic004G034900 Sobic008G130100--Sobic004G034900 Sobic002G346200 Sobic002G346200 Sobic008G130100--Sobic002G346200 Sobic008G130100--Sobic010G206900 Sobic008G130100--Sobic007G198300 Sobic006G065600--Sobic004G181600 Sobic006G065600--Sobic007G167100 Sobic006G065600--Sobic006G133900 Sobic006G065600--Sobic002G104100 Sobic006G065600--Sobic008G130100 Sobic006G065600--Sobic001G454500 Sobic007G193700 Sobic007G193700 Sobic006G065600--Sobic007G193700 Sobic006G065600--Sobic004G178500 Sobic006G065600--Sobic001G365900 Sobic004G042200 Sobic004G042200 Sobic003G191700--Sobic004G042200 Sobic003G313300 Sobic003G313300 Sobic003G191700--Sobic003G313300 Sobic003G191700--Sobic006G133900 Sobic003G191700--Sobic003G229300 Sobic003G017100 Sobic003G017100 Sobic003G191700--Sobic003G017100 Sobic003G191700--Sobic009G038900 Sobic003G191700--Sobic007G198300 Sobic003G191700--Sobic003G155100 Sobic010G002700 Sobic010G002700 Sobic003G191700--Sobic010G002700
Octagon: transcription factors


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