Gene annotation
Transcriptome id Sobic.001G169900.1
Synonym Sb01g014860
Functional annotation seed maturation protein PM23, putative, expressed
UniProt C5WT60
Pfam PF05542
Panther DB PTHR33598 PTHR33598:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G14910 : -
RAP-DB (Rice) LOC_Os03g41080.1 : seed maturation protein PM23, putative, expressed
MaizeGDB (Corn) Zm00025a017320 , Zm00025a007432 , Zm00025a026027
Brachypodium KQK14222
Barley -
Wheat TraesCS4D02G076800 , TraesCS4B02G078200 , TraesCS4A02G236800
Populus -


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cDNA sequences
Sobic.001G169900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G002700 expressed protein -
2 Sobic.006G158100 tRNA-dihydrouridine synthase, putative, expressed K05543: tRNA-dihydrouridine synthase 2
3 Sobic.010G043800 uncharacterized protein ycf45, putative, expressed -
4 Sobic.007G136200 expressed protein -
5 Sobic.001G198100 PAP fibrillin family domain containing protein, expressed -
6 Sobic.006G142600 lipase class 3 family protein, putative, expressed -
7 Sobic.001G394800 tetratricopeptide repeat domain containing protein, expressed -
8 Sobic.001G017300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA-binding protein containing a PIN domain, putative, expressed K06962: uncharacterized protein
9 Sobic.003G017100 ABC transporter, ATP-binding protein, putative, expressed -
10 Sobic.003G220100 - -
11 Sobic.003G276300 zinc knuckle domain containing protein, expressed -
12 Sobic.002G006600 -(PubMedID : 26976818)@aminotransferase, classes I and II, domain containing protein, expressed K14272: glutamate--glyoxylate aminotransferase
13 Sobic.006G133900 NIN, putative, expressed -
14 Sobic.001G378100 relA-SpoT like protein RSH1, putative, expressed -
15 Sobic.005G106600 CGMC_MAPKCGMC_2.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
16 Sobic.003G057233 - -
17 Sobic.003G003450 - K01177: beta-amylase
18 Sobic.001G054000 WD domain, G-beta repeat domain containing protein, expressed K14003: PREB, prolactin regulatory element-binding protein
19 Sobic.006G232600 amine oxidase, flavin-containing, domain containing protein, expressed K02293: PDS, 15-cis-phytoene desaturase
20 Sobic.001G504400 expressed protein -


Gene co-expression network
sample Sobic001G169900 Sobic001G169900 Sobic010G002700 Sobic010G002700 Sobic001G169900--Sobic010G002700 Sobic006G158100 Sobic006G158100 Sobic001G169900--Sobic006G158100 Sobic010G043800 Sobic010G043800 Sobic001G169900--Sobic010G043800 Sobic007G136200 Sobic007G136200 Sobic001G169900--Sobic007G136200 Sobic001G198100 Sobic001G198100 Sobic001G169900--Sobic001G198100 Sobic006G142600 Sobic006G142600 Sobic001G169900--Sobic006G142600 Sobic001G394800 Sobic001G394800 Sobic001G169900--Sobic001G394800 Sobic001G017300 Sobic001G017300 Sobic001G169900--Sobic001G017300 Sobic003G017100 Sobic003G017100 Sobic001G169900--Sobic003G017100 Sobic010G002700--Sobic003G017100 Sobic010G002700--Sobic001G169900 Sobic005G118400 Sobic005G118400 Sobic010G002700--Sobic005G118400 Sobic010G002700--Sobic010G043800 Sobic001G378100 Sobic001G378100 Sobic010G002700--Sobic001G378100 Sobic010G002700--Sobic007G136200 Sobic003G276300 Sobic003G276300 Sobic010G002700--Sobic003G276300 Sobic010G002700--Sobic001G198100 Sobic001G530900 Sobic001G530900 Sobic010G002700--Sobic001G530900 Sobic006G158100--Sobic007G136200 Sobic006G158100--Sobic001G017300 Sobic001G258200 Sobic001G258200 Sobic006G158100--Sobic001G258200 Sobic001G504400 Sobic001G504400 Sobic006G158100--Sobic001G504400 Sobic003G094100 Sobic003G094100 Sobic006G158100--Sobic003G094100 Sobic006G158100--Sobic010G043800 Sobic010G067100 Sobic010G067100 Sobic006G158100--Sobic010G067100 Sobic006G158100--Sobic001G169900 Sobic003G185900 Sobic003G185900 Sobic006G158100--Sobic003G185900 Sobic009G121000 Sobic009G121000 Sobic010G043800--Sobic009G121000 Sobic010G043800--Sobic007G136200 Sobic010G043800--Sobic001G504400 Sobic010G043800--Sobic006G142600 Sobic010G043800--Sobic010G002700 Sobic010G043800--Sobic006G158100 Sobic007G103400 Sobic007G103400 Sobic010G043800--Sobic007G103400 Sobic010G043800--Sobic001G169900 Sobic010G043800--Sobic001G378100 Sobic007G136200--Sobic006G158100 Sobic007G136200--Sobic010G043800 Sobic007G136200--Sobic001G504400 Sobic007G136200--Sobic010G002700 Sobic007G136200--Sobic007G103400 Sobic007G136200--Sobic001G169900 Sobic004G337400 Sobic004G337400 Sobic007G136200--Sobic004G337400 Sobic007G108900 Sobic007G108900 Sobic007G136200--Sobic007G108900 Sobic007G136200--Sobic001G378100 Sobic001G198100--Sobic003G017100 Sobic003G247400 Sobic003G247400 Sobic001G198100--Sobic003G247400 Sobic001G198100--Sobic001G169900 Sobic001G198100--Sobic010G002700 Sobic002G006600 Sobic002G006600 Sobic001G198100--Sobic002G006600 Sobic001G198100--Sobic010G043800 Sobic001G198100--Sobic009G121000 Sobic001G198100--Sobic003G276300 Sobic001G198100--Sobic006G142600 Sobic006G142600--Sobic010G043800 Sobic003G306200 Sobic003G306200 Sobic006G142600--Sobic003G306200 Sobic006G142600--Sobic007G103400 Sobic006G142600--Sobic007G108900 Sobic006G142600--Sobic007G136200 Sobic006G142600--Sobic001G169900 Sobic006G142600--Sobic006G158100 Sobic002G198300 Sobic002G198300 Sobic006G142600--Sobic002G198300 Sobic006G142600--Sobic003G094100 Sobic002G138100 Sobic002G138100 Sobic001G394800--Sobic002G138100 Sobic001G394800--Sobic001G169900 Sobic003G003450 Sobic003G003450 Sobic001G394800--Sobic003G003450 Sobic003G057233 Sobic003G057233 Sobic001G394800--Sobic003G057233 Sobic007G010800 Sobic007G010800 Sobic001G394800--Sobic007G010800 Sobic001G283100 Sobic001G283100 Sobic001G394800--Sobic001G283100 Sobic004G035900 Sobic004G035900 Sobic001G394800--Sobic004G035900 Sobic001G054000 Sobic001G054000 Sobic001G394800--Sobic001G054000 Sobic007G227100 Sobic007G227100 Sobic001G394800--Sobic007G227100 Sobic001G017300--Sobic006G158100 Sobic004G356400 Sobic004G356400 Sobic001G017300--Sobic004G356400 Sobic006G093800 Sobic006G093800 Sobic001G017300--Sobic006G093800 Sobic010G249700 Sobic010G249700 Sobic001G017300--Sobic010G249700 Sobic001G017300--Sobic007G136200 Sobic001G017300--Sobic003G276300 Sobic005G101200 Sobic005G101200 Sobic001G017300--Sobic005G101200 Sobic001G017300--Sobic001G169900 Sobic001G017300--Sobic010G002700 Sobic003G017100--Sobic002G006600 Sobic003G017100--Sobic010G002700 Sobic003G017100--Sobic001G198100 Sobic003G017100--Sobic003G276300 Sobic003G017100--Sobic001G169900 Sobic003G313300 Sobic003G313300 Sobic003G017100--Sobic003G313300 Sobic001G468700 Sobic001G468700 Sobic003G017100--Sobic001G468700 Sobic003G017100--Sobic003G247400 Sobic003G191700 Sobic003G191700 Sobic003G017100--Sobic003G191700
Octagon: transcription factors


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