Gene annotation
Transcriptome id Sobic.006G142600.1,Sobic.006G142600.2
Synonym Sb06g022160
Functional annotation lipase class 3 family protein, putative, expressed
UniProt A0A1Z5REW6 , A0A1B6PLZ0
Pfam PF00168 PF01764
Panther DB PTHR23180 PTHR23180:SF243
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006629lipid metabolic process


Orthologs (automatic annotation)
TAIR AT4G13550 : triglyceride lipases;triglyceride lipases
RAP-DB (Rice) LOC_Os04g43030.1 : lipase class 3 family protein, putative, expressed
MaizeGDB (Corn) Zm00025a056468
Brachypodium PNT61448 , KQJ83502 , KQJ83503 , KQJ83501
Barley HORVU2Hr1G088180.9 , HORVU2Hr1G088180.8 , HORVU2Hr1G088180.5 , HORVU2Hr1G088180.4 , HORVU2Hr1G088180.7 , HORVU2Hr1G088180.6 , HORVU2Hr1G088180.1 , HORVU2Hr1G088180.3 , HORVU2Hr1G088180.2 , HORVU2Hr1G088180.37 , HORVU2Hr1G088180.36 , HORVU2Hr1G088180.35 , HORVU2Hr1G088180.34 , HORVU2Hr1G088180.33 , HORVU2Hr1G088180.32 , HORVU2Hr1G088180.31 , HORVU2Hr1G088180.39 , HORVU2Hr1G088180.38 , HORVU2Hr1G088180.30 , HORVU2Hr1G088180.25 , HORVU2Hr1G088180.24 , HORVU2Hr1G088180.26 , HORVU2Hr1G088180.27 , HORVU2Hr1G088180.20 , HORVU2Hr1G088180.21 , HORVU2Hr1G088180.22 , HORVU2Hr1G088180.23 , HORVU2Hr1G088180.28 , HORVU2Hr1G088180.29 , HORVU2Hr1G088180.19 , HORVU2Hr1G088180.18 , HORVU2Hr1G088180.11 , HORVU2Hr1G088180.10 , HORVU2Hr1G088180.13 , HORVU2Hr1G088180.12 , HORVU2Hr1G088180.15 , HORVU2Hr1G088180.14 , HORVU2Hr1G088180.17 , HORVU2Hr1G088180.16 , HORVU2Hr1G088180.42 , HORVU2Hr1G088180.43 , HORVU2Hr1G088180.40 , HORVU2Hr1G088180.41 , HORVU2Hr1G088180.44 , HORVU2Hr1G088180.45
Wheat TraesCS2D02G362500 , TraesCS2A02G364500 , TraesCS2A02G364500 , TraesCS2A02G364500 , TraesCS2B02G383100 , TraesCS2B02G383100 , TraesCS2B02G383100 , TraesCS2B02G383100 , TraesCS2B02G383100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G043800 uncharacterized protein ycf45, putative, expressed -
2 Sobic.003G306200 hemimethylated DNA binding domain containing protein, expressed -
3 Sobic.007G103400 expressed protein -
4 Sobic.007G108900 APE1, putative, expressed -
5 Sobic.007G136200 expressed protein -
6 Sobic.001G169900 seed maturation protein PM23, putative, expressed -
7 Sobic.006G158100 tRNA-dihydrouridine synthase, putative, expressed K05543: tRNA-dihydrouridine synthase 2
8 Sobic.002G198300 zinc finger, C3HC4 type domain containing protein, expressed -
9 Sobic.003G094100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.003G276300 zinc knuckle domain containing protein, expressed -
11 Sobic.001G393300 HAD-superfamily hydrolase, subfamily IA, variant 3 containing protein, expressed -
12 Sobic.001G378100 relA-SpoT like protein RSH1, putative, expressed -
13 Sobic.003G003450 - K01177: beta-amylase
14 Sobic.002G298800 PAP fibrillin family domain containing protein, expressed -
15 Sobic.009G121000 expressed protein -
16 Sobic.001G504400 expressed protein -
17 Sobic.003G005000 expressed protein -
18 Sobic.003G073800 phosphatidate cytidylyltransferase, putative, expressed K00981: E2.7.7.41, CDS1, CDS2, phosphatidate cytidylyltransferase
19 Sobic.010G002700 expressed protein -
20 Sobic.009G170200 translation initiation factor IF-2, chloroplast precursor, putative, expressed K02519: infB, translation initiation factor IF-2


Gene co-expression network
sample Sobic006G142600 Sobic006G142600 Sobic010G043800 Sobic010G043800 Sobic006G142600--Sobic010G043800 Sobic003G306200 Sobic003G306200 Sobic006G142600--Sobic003G306200 Sobic007G103400 Sobic007G103400 Sobic006G142600--Sobic007G103400 Sobic007G108900 Sobic007G108900 Sobic006G142600--Sobic007G108900 Sobic007G136200 Sobic007G136200 Sobic006G142600--Sobic007G136200 Sobic001G169900 Sobic001G169900 Sobic006G142600--Sobic001G169900 Sobic006G158100 Sobic006G158100 Sobic006G142600--Sobic006G158100 Sobic002G198300 Sobic002G198300 Sobic006G142600--Sobic002G198300 Sobic003G094100 Sobic003G094100 Sobic006G142600--Sobic003G094100 Sobic009G121000 Sobic009G121000 Sobic010G043800--Sobic009G121000 Sobic010G043800--Sobic007G136200 Sobic001G504400 Sobic001G504400 Sobic010G043800--Sobic001G504400 Sobic010G043800--Sobic006G142600 Sobic010G002700 Sobic010G002700 Sobic010G043800--Sobic010G002700 Sobic010G043800--Sobic006G158100 Sobic010G043800--Sobic007G103400 Sobic010G043800--Sobic001G169900 Sobic001G378100 Sobic001G378100 Sobic010G043800--Sobic001G378100 Sobic003G306200--Sobic007G103400 Sobic003G398800 Sobic003G398800 Sobic003G306200--Sobic003G398800 Sobic002G275300 Sobic002G275300 Sobic003G306200--Sobic002G275300 Sobic002G298800 Sobic002G298800 Sobic003G306200--Sobic002G298800 Sobic003G306200--Sobic002G198300 Sobic010G035400 Sobic010G035400 Sobic003G306200--Sobic010G035400 Sobic009G056700 Sobic009G056700 Sobic003G306200--Sobic009G056700 Sobic006G238200 Sobic006G238200 Sobic003G306200--Sobic006G238200 Sobic003G306200--Sobic006G142600 Sobic009G237000 Sobic009G237000 Sobic007G103400--Sobic009G237000 Sobic007G103400--Sobic002G298800 Sobic004G353100 Sobic004G353100 Sobic007G103400--Sobic004G353100 Sobic007G103400--Sobic010G035400 Sobic007G103400--Sobic001G504400 Sobic007G103400--Sobic003G306200 Sobic007G103400--Sobic002G198300 Sobic003G233700 Sobic003G233700 Sobic007G103400--Sobic003G233700 Sobic007G103400--Sobic002G275300 Sobic007G108900--Sobic003G094100 Sobic001G509200 Sobic001G509200 Sobic007G108900--Sobic001G509200 Sobic004G103300 Sobic004G103300 Sobic007G108900--Sobic004G103300 Sobic001G393300 Sobic001G393300 Sobic007G108900--Sobic001G393300 Sobic006G102000 Sobic006G102000 Sobic007G108900--Sobic006G102000 Sobic001G283100 Sobic001G283100 Sobic007G108900--Sobic001G283100 Sobic010G181300 Sobic010G181300 Sobic007G108900--Sobic010G181300 Sobic007G166300 Sobic007G166300 Sobic007G108900--Sobic007G166300 Sobic007G108900--Sobic002G298800 Sobic007G136200--Sobic006G158100 Sobic007G136200--Sobic010G043800 Sobic007G136200--Sobic001G504400 Sobic007G136200--Sobic010G002700 Sobic007G136200--Sobic007G103400 Sobic007G136200--Sobic001G169900 Sobic004G337400 Sobic004G337400 Sobic007G136200--Sobic004G337400 Sobic007G136200--Sobic007G108900 Sobic007G136200--Sobic001G378100 Sobic001G169900--Sobic010G002700 Sobic001G169900--Sobic006G158100 Sobic001G169900--Sobic010G043800 Sobic001G169900--Sobic007G136200 Sobic001G198100 Sobic001G198100 Sobic001G169900--Sobic001G198100 Sobic001G169900--Sobic006G142600 Sobic001G394800 Sobic001G394800 Sobic001G169900--Sobic001G394800 Sobic001G017300 Sobic001G017300 Sobic001G169900--Sobic001G017300 Sobic003G017100 Sobic003G017100 Sobic001G169900--Sobic003G017100 Sobic006G158100--Sobic007G136200 Sobic006G158100--Sobic001G017300 Sobic001G258200 Sobic001G258200 Sobic006G158100--Sobic001G258200 Sobic006G158100--Sobic001G504400 Sobic006G158100--Sobic003G094100 Sobic006G158100--Sobic010G043800 Sobic010G067100 Sobic010G067100 Sobic006G158100--Sobic010G067100 Sobic006G158100--Sobic001G169900 Sobic003G185900 Sobic003G185900 Sobic006G158100--Sobic003G185900 Sobic002G198300--Sobic002G298800 Sobic002G198300--Sobic001G393300 Sobic002G198300--Sobic007G103400 Sobic001G368600 Sobic001G368600 Sobic002G198300--Sobic001G368600 Sobic010G125833 Sobic010G125833 Sobic002G198300--Sobic010G125833 Sobic002G198300--Sobic001G504400 Sobic002G198300--Sobic001G378100 Sobic002G198300--Sobic003G306200 Sobic001G536700 Sobic001G536700 Sobic002G198300--Sobic001G536700 Sobic003G094100--Sobic007G108900 Sobic003G094100--Sobic001G509200 Sobic007G135800 Sobic007G135800 Sobic003G094100--Sobic007G135800 Sobic003G094100--Sobic001G393300 Sobic003G094100--Sobic001G283100 Sobic007G157300 Sobic007G157300 Sobic003G094100--Sobic007G157300 Sobic003G094100--Sobic004G103300 Sobic001G180200 Sobic001G180200 Sobic003G094100--Sobic001G180200 Sobic003G094100--Sobic002G298800
Octagon: transcription factors


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