Gene annotation
Transcriptome id Sobic.003G073800.2,Sobic.003G073800.3,Sobic.003G073800.1
Synonym CDS2, Sb03g006220
Functional annotation phosphatidate cytidylyltransferase, putative, expressed
UniProt A0A1B6Q1U6 , A0A1B6Q1U5
Pfam PF01148
Panther DB PTHR13773 PTHR13773:SF13
NCBI CDD -
KEGG Orthology K00981; E2.7.7.41, CDS1, CDS2, phosphatidate cytidylyltransferase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G22340 : cytidinediphosphate diacylglycerol synthase 2
RAP-DB (Rice) LOC_Os01g55360.2,LOC_Os01g55360.1 : phosphatidate cytidylyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a040510 , Zm00025a039989
Brachypodium KQK12637 , KQK09825 , KQK09826 , KQK09827
Barley HORVU1Hr1G001800.1 , HORVU1Hr1G001800.2 , HORVU1Hr1G001800.3 , HORVU1Hr1G001800.4 , HORVU1Hr1G001760.11 , HORVU1Hr1G001760.10 , HORVU1Hr1G001760.13 , HORVU1Hr1G001760.12 , HORVU1Hr1G001760.15 , HORVU1Hr1G001760.14 , HORVU1Hr1G001760.16 , HORVU1Hr1G001760.2 , HORVU1Hr1G001760.9 , HORVU3Hr1G073040.17 , HORVU3Hr1G073040.16 , HORVU3Hr1G073040.15 , HORVU3Hr1G073040.14 , HORVU3Hr1G073040.13 , HORVU3Hr1G073040.12 , HORVU3Hr1G073040.11 , HORVU3Hr1G073040.10 , HORVU3Hr1G073040.19 , HORVU3Hr1G073040.18 , HORVU1Hr1G001760.5 , HORVU1Hr1G001760.4 , HORVU1Hr1G001760.7 , HORVU1Hr1G001760.6 , HORVU1Hr1G001760.1 , HORVU3Hr1G073040.9 , HORVU3Hr1G073040.8 , HORVU3Hr1G073040.7 , HORVU3Hr1G073040.6 , HORVU3Hr1G073040.5 , HORVU3Hr1G073040.4 , HORVU3Hr1G073040.3 , HORVU3Hr1G073040.2 , HORVU3Hr1G073040.1 , HORVU1Hr1G001760.8 , HORVU1Hr1G001760.3 , HORVU3Hr1G073040.24 , HORVU3Hr1G073040.25 , HORVU3Hr1G073040.22 , HORVU3Hr1G073040.23 , HORVU3Hr1G073040.20 , HORVU3Hr1G073040.21
Wheat TraesCS1B02G021300 , TraesCS1B02G021300 , TraesCS3B02G329900 , TraesCS1B02G021300 , TraesCS1B02G021300 , TraesCS3D02G295300 , TraesCS3D02G295300 , TraesCS1D02G016500 , TraesCS1D02G016500 , TraesCS3A02G306600 , TraesCS1A02G016900 , TraesCS1A02G016900 , TraesCS1A02G016900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G378100 relA-SpoT like protein RSH1, putative, expressed -
2 Sobic.001G077300 thioredoxin, putative, expressed -
3 Sobic.001G180200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxisomal membrane protein, putative, expressed K13348: protein Mpv17
4 Sobic.009G207900 expressed protein -
5 Sobic.001G536700 expressed protein -
6 Sobic.009G073900 thioredoxin, putative, expressed -
7 Sobic.006G090100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K09919: uncharacterized protein
8 Sobic.007G058100 light-mediated development protein DET1, putative, expressed K10571: de-etiolated-1
9 Sobic.002G206300 tsi1-interacting protein TSIP1, putative, expressed -
10 Sobic.001G359300 cytochrome P450, putative, expressed -
11 Sobic.001G258200 Ser/Thr protein phosphatase family protein, putative, expressed -
12 Sobic.001G263100 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
13 Sobic.002G198300 zinc finger, C3HC4 type domain containing protein, expressed -
14 Sobic.005G179300 ABC transporter, ATP-binding protein, putative, expressed -
15 Sobic.003G003450 - K01177: beta-amylase
16 Sobic.001G504400 expressed protein -
17 Sobic.006G065100 ERD1 protein, chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
18 Sobic.001G217900 PPR repeat domain containing protein, putative, expressed -
19 Sobic.001G393300 HAD-superfamily hydrolase, subfamily IA, variant 3 containing protein, expressed -
20 Sobic.004G127800 AGC_PKA/PKG_like.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -


Gene co-expression network
sample Sobic003G073800 Sobic003G073800 Sobic001G378100 Sobic001G378100 Sobic003G073800--Sobic001G378100 Sobic001G077300 Sobic001G077300 Sobic003G073800--Sobic001G077300 Sobic001G180200 Sobic001G180200 Sobic003G073800--Sobic001G180200 Sobic009G207900 Sobic009G207900 Sobic003G073800--Sobic009G207900 Sobic001G536700 Sobic001G536700 Sobic003G073800--Sobic001G536700 Sobic009G073900 Sobic009G073900 Sobic003G073800--Sobic009G073900 Sobic006G090100 Sobic006G090100 Sobic003G073800--Sobic006G090100 Sobic007G058100 Sobic007G058100 Sobic003G073800--Sobic007G058100 Sobic002G206300 Sobic002G206300 Sobic003G073800--Sobic002G206300 Sobic001G378100--Sobic003G073800 Sobic001G217900 Sobic001G217900 Sobic001G378100--Sobic001G217900 Sobic001G504400 Sobic001G504400 Sobic001G378100--Sobic001G504400 Sobic001G378100--Sobic001G077300 Sobic001G540600 Sobic001G540600 Sobic001G378100--Sobic001G540600 Sobic001G378100--Sobic001G536700 Sobic006G232600 Sobic006G232600 Sobic001G378100--Sobic006G232600 Sobic009G170200 Sobic009G170200 Sobic001G378100--Sobic009G170200 Sobic001G258200 Sobic001G258200 Sobic001G378100--Sobic001G258200 Sobic001G077300--Sobic009G073900 Sobic001G077300--Sobic006G090100 Sobic006G235400 Sobic006G235400 Sobic001G077300--Sobic006G235400 Sobic004G127800 Sobic004G127800 Sobic001G077300--Sobic004G127800 Sobic001G359300 Sobic001G359300 Sobic001G077300--Sobic001G359300 Sobic009G093100 Sobic009G093100 Sobic001G077300--Sobic009G093100 Sobic003G341300 Sobic003G341300 Sobic001G077300--Sobic003G341300 Sobic006G212800 Sobic006G212800 Sobic001G077300--Sobic006G212800 Sobic003G003450 Sobic003G003450 Sobic001G077300--Sobic003G003450 Sobic001G180200--Sobic003G341300 Sobic001G180200--Sobic002G206300 Sobic007G135800 Sobic007G135800 Sobic001G180200--Sobic007G135800 Sobic009G038701 Sobic009G038701 Sobic001G180200--Sobic009G038701 Sobic001G180200--Sobic009G207900 Sobic003G094100 Sobic003G094100 Sobic001G180200--Sobic003G094100 Sobic001G180200--Sobic001G504400 Sobic001G263100 Sobic001G263100 Sobic001G180200--Sobic001G263100 Sobic002G162400 Sobic002G162400 Sobic001G180200--Sobic002G162400 Sobic009G207900--Sobic006G212800 Sobic009G207900--Sobic001G180200 Sobic009G207900--Sobic002G206300 Sobic009G207900--Sobic001G504400 Sobic009G219100 Sobic009G219100 Sobic009G207900--Sobic009G219100 Sobic009G207900--Sobic007G135800 Sobic009G207900--Sobic009G038701 Sobic009G207900--Sobic003G073800 Sobic009G062400 Sobic009G062400 Sobic009G207900--Sobic009G062400 Sobic001G536700--Sobic002G206300 Sobic001G536700--Sobic001G378100 Sobic001G536700--Sobic001G180200 Sobic001G536700--Sobic003G094100 Sobic001G536700--Sobic003G341300 Sobic001G345100 Sobic001G345100 Sobic001G536700--Sobic001G345100 Sobic001G536700--Sobic001G077300 Sobic001G536700--Sobic001G504400 Sobic001G536700--Sobic007G135800 Sobic009G073900--Sobic001G077300 Sobic009G073900--Sobic003G003450 Sobic009G073900--Sobic006G090100 Sobic001G509200 Sobic001G509200 Sobic009G073900--Sobic001G509200 Sobic007G087100 Sobic007G087100 Sobic009G073900--Sobic007G087100 Sobic009G073900--Sobic003G094100 Sobic002G081400 Sobic002G081400 Sobic009G073900--Sobic002G081400 Sobic009G073900--Sobic007G135800 Sobic006G213700 Sobic006G213700 Sobic009G073900--Sobic006G213700 Sobic001G207800 Sobic001G207800 Sobic006G090100--Sobic001G207800 Sobic001G283100 Sobic001G283100 Sobic006G090100--Sobic001G283100 Sobic006G090100--Sobic001G077300 Sobic006G090100--Sobic001G509200 Sobic006G090100--Sobic009G073900 Sobic002G382700 Sobic002G382700 Sobic006G090100--Sobic002G382700 Sobic006G090100--Sobic003G341300 Sobic001G046000 Sobic001G046000 Sobic006G090100--Sobic001G046000 Sobic006G090100--Sobic002G081400 Sobic007G058100--Sobic001G263100 Sobic007G058100--Sobic001G217900 Sobic004G082300 Sobic004G082300 Sobic007G058100--Sobic004G082300 Sobic007G058100--Sobic001G258200 Sobic007G058100--Sobic003G341300 Sobic008G129900 Sobic008G129900 Sobic007G058100--Sobic008G129900 Sobic004G143300 Sobic004G143300 Sobic007G058100--Sobic004G143300 Sobic009G256100 Sobic009G256100 Sobic007G058100--Sobic009G256100 Sobic007G058100--Sobic001G345100 Sobic002G206300--Sobic009G038701 Sobic002G206300--Sobic001G504400 Sobic002G206300--Sobic001G180200 Sobic002G206300--Sobic001G536700 Sobic002G206300--Sobic009G207900 Sobic002G206300--Sobic001G258200 Sobic002G206300--Sobic008G129900 Sobic002G206300--Sobic001G217900 Sobic002G206300--Sobic003G341300
Octagon: transcription factors


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