Gene annotation
Transcriptome id Sobic.001G536700.1
Synonym Sb01g049950
Functional annotation expressed protein
UniProt C5WMP0
Pfam -
Panther DB PTHR35115 PTHR35115:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G34090 : -
RAP-DB (Rice) LOC_Os03g01920.1 : expressed protein
MaizeGDB (Corn) Zm00025a053546 , Zm00025a007885 , Zm00025a039717
Brachypodium KQK24063
Barley HORVU5Hr1G104810.7 , HORVU5Hr1G104810.6 , HORVU5Hr1G104810.3 , HORVU5Hr1G104810.2 , HORVU5Hr1G104810.1 , HORVU3Hr1G007480.4 , HORVU3Hr1G007480.5 , HORVU3Hr1G007480.6 , HORVU3Hr1G007480.7 , HORVU3Hr1G007480.3
Wheat TraesCS5A02G551000 , TraesCS4B02G386000 , TraesCS4B02G386000 , TraesCSU02G126900
Populus -


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cDNA sequences
Sobic.001G536700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G206300 tsi1-interacting protein TSIP1, putative, expressed -
2 Sobic.001G378100 relA-SpoT like protein RSH1, putative, expressed -
3 Sobic.001G180200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxisomal membrane protein, putative, expressed K13348: protein Mpv17
4 Sobic.003G094100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.003G341300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.001G345100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding protein, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
7 Sobic.001G077300 thioredoxin, putative, expressed -
8 Sobic.001G504400 expressed protein -
9 Sobic.007G135800 ATP-dependent Clp protease adaptor protein ClpS containing protein, expressed K06891: ATP-dependent Clp protease adaptor protein ClpS
10 Sobic.009G170200 translation initiation factor IF-2, chloroplast precursor, putative, expressed K02519: infB, translation initiation factor IF-2
11 Sobic.009G073900 thioredoxin, putative, expressed -
12 Sobic.009G093100 OsAGSW1(Ortholog in rice:Li and Li 2015)(PubMedID : 31659923)@ ELMO/CED-12 family protein, putative, expressed -
13 Sobic.002G198300 zinc finger, C3HC4 type domain containing protein, expressed -
14 Sobic.001G258200 Ser/Thr protein phosphatase family protein, putative, expressed -
15 Sobic.009G038701 - -
16 Sobic.007G157300 NAD dependent epimerase/dehydratase family protein, putative, expressed -
17 Sobic.003G073800 phosphatidate cytidylyltransferase, putative, expressed K00981: E2.7.7.41, CDS1, CDS2, phosphatidate cytidylyltransferase
18 Sobic.004G103300 Complex I intermediate-associated protein 30 domain containing protein, putative, expressed -
19 Sobic.001G217900 PPR repeat domain containing protein, putative, expressed -
20 Sobic.001G393300 HAD-superfamily hydrolase, subfamily IA, variant 3 containing protein, expressed -


Gene co-expression network
sample Sobic001G536700 Sobic001G536700 Sobic002G206300 Sobic002G206300 Sobic001G536700--Sobic002G206300 Sobic001G378100 Sobic001G378100 Sobic001G536700--Sobic001G378100 Sobic001G180200 Sobic001G180200 Sobic001G536700--Sobic001G180200 Sobic003G094100 Sobic003G094100 Sobic001G536700--Sobic003G094100 Sobic003G341300 Sobic003G341300 Sobic001G536700--Sobic003G341300 Sobic001G345100 Sobic001G345100 Sobic001G536700--Sobic001G345100 Sobic001G077300 Sobic001G077300 Sobic001G536700--Sobic001G077300 Sobic001G504400 Sobic001G504400 Sobic001G536700--Sobic001G504400 Sobic007G135800 Sobic007G135800 Sobic001G536700--Sobic007G135800 Sobic009G038701 Sobic009G038701 Sobic002G206300--Sobic009G038701 Sobic002G206300--Sobic001G504400 Sobic002G206300--Sobic001G180200 Sobic002G206300--Sobic001G536700 Sobic009G207900 Sobic009G207900 Sobic002G206300--Sobic009G207900 Sobic001G258200 Sobic001G258200 Sobic002G206300--Sobic001G258200 Sobic008G129900 Sobic008G129900 Sobic002G206300--Sobic008G129900 Sobic001G217900 Sobic001G217900 Sobic002G206300--Sobic001G217900 Sobic002G206300--Sobic003G341300 Sobic003G073800 Sobic003G073800 Sobic001G378100--Sobic003G073800 Sobic001G378100--Sobic001G217900 Sobic001G378100--Sobic001G504400 Sobic001G378100--Sobic001G077300 Sobic001G540600 Sobic001G540600 Sobic001G378100--Sobic001G540600 Sobic001G378100--Sobic001G536700 Sobic006G232600 Sobic006G232600 Sobic001G378100--Sobic006G232600 Sobic009G170200 Sobic009G170200 Sobic001G378100--Sobic009G170200 Sobic001G378100--Sobic001G258200 Sobic001G180200--Sobic003G341300 Sobic001G180200--Sobic002G206300 Sobic001G180200--Sobic007G135800 Sobic001G180200--Sobic009G038701 Sobic001G180200--Sobic009G207900 Sobic001G180200--Sobic003G094100 Sobic001G180200--Sobic001G504400 Sobic001G263100 Sobic001G263100 Sobic001G180200--Sobic001G263100 Sobic002G162400 Sobic002G162400 Sobic001G180200--Sobic002G162400 Sobic007G108900 Sobic007G108900 Sobic003G094100--Sobic007G108900 Sobic001G509200 Sobic001G509200 Sobic003G094100--Sobic001G509200 Sobic003G094100--Sobic007G135800 Sobic001G393300 Sobic001G393300 Sobic003G094100--Sobic001G393300 Sobic001G283100 Sobic001G283100 Sobic003G094100--Sobic001G283100 Sobic007G157300 Sobic007G157300 Sobic003G094100--Sobic007G157300 Sobic004G103300 Sobic004G103300 Sobic003G094100--Sobic004G103300 Sobic003G094100--Sobic001G180200 Sobic002G298800 Sobic002G298800 Sobic003G094100--Sobic002G298800 Sobic003G341300--Sobic001G180200 Sobic003G341300--Sobic007G157300 Sobic003G341300--Sobic001G283100 Sobic003G409700 Sobic003G409700 Sobic003G341300--Sobic003G409700 Sobic006G235400 Sobic006G235400 Sobic003G341300--Sobic006G235400 Sobic003G341300--Sobic002G162400 Sobic003G341300--Sobic001G077300 Sobic006G090100 Sobic006G090100 Sobic003G341300--Sobic006G090100 Sobic003G341300--Sobic003G094100 Sobic004G143300 Sobic004G143300 Sobic001G345100--Sobic004G143300 Sobic007G058100 Sobic007G058100 Sobic001G345100--Sobic007G058100 Sobic001G345100--Sobic001G536700 Sobic001G345100--Sobic008G129900 Sobic010G231300 Sobic010G231300 Sobic001G345100--Sobic010G231300 Sobic008G033000 Sobic008G033000 Sobic001G345100--Sobic008G033000 Sobic001G345100--Sobic006G235400 Sobic001G345100--Sobic001G263100 Sobic001G345100--Sobic001G258200 Sobic009G073900 Sobic009G073900 Sobic001G077300--Sobic009G073900 Sobic001G077300--Sobic006G090100 Sobic001G077300--Sobic006G235400 Sobic004G127800 Sobic004G127800 Sobic001G077300--Sobic004G127800 Sobic001G359300 Sobic001G359300 Sobic001G077300--Sobic001G359300 Sobic009G093100 Sobic009G093100 Sobic001G077300--Sobic009G093100 Sobic001G077300--Sobic003G341300 Sobic006G212800 Sobic006G212800 Sobic001G077300--Sobic006G212800 Sobic003G003450 Sobic003G003450 Sobic001G077300--Sobic003G003450 Sobic001G504400--Sobic002G206300 Sobic007G103400 Sobic007G103400 Sobic001G504400--Sobic007G103400 Sobic001G504400--Sobic009G038701 Sobic003G185900 Sobic003G185900 Sobic001G504400--Sobic003G185900 Sobic001G504400--Sobic001G258200 Sobic010G125833 Sobic010G125833 Sobic001G504400--Sobic010G125833 Sobic001G504400--Sobic008G033000 Sobic001G504400--Sobic001G180200 Sobic001G504400--Sobic001G378100 Sobic007G135800--Sobic001G509200 Sobic007G135800--Sobic003G094100 Sobic007G135800--Sobic001G393300 Sobic007G135800--Sobic001G180200 Sobic007G135800--Sobic004G103300 Sobic006G213700 Sobic006G213700 Sobic007G135800--Sobic006G213700 Sobic007G166300 Sobic007G166300 Sobic007G135800--Sobic007G166300 Sobic007G135800--Sobic003G409700 Sobic007G135800--Sobic003G341300
Octagon: transcription factors


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