Gene annotation
Transcriptome id Sobic.001G345100.1
Synonym FAB1B, Sb01g033120
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding protein, putative, expressed
UniProt C5WXJ6
Pfam PF01363 PF00118 PF01504
Panther DB PTHR11353 PTHR11353:SF98
NCBI CDD -
KEGG Orthology K00921; PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
Gene Ontology GO:0005524; ATP binding GO:0016307phosphatidylinositol phosphate kinase activity


Orthologs (automatic annotation)
TAIR AT3G14270 : phosphatidylinositol-4-phosphate 5-kinase family protein
RAP-DB (Rice) LOC_Os03g28140.1 : 1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a002779
Brachypodium PNT77273 , PNT77272 , PNT77271 , PNT77270 , PNT77274 , KQK21359 , KQJ98517 , KQK21361 , KQK21360 , KQK21362
Barley HORVU4Hr1G039410.20 , HORVU4Hr1G039410.21 , HORVU4Hr1G039410.22 , HORVU4Hr1G039410.23 , HORVU4Hr1G039410.24 , HORVU4Hr1G039410.25 , HORVU4Hr1G039410.26 , HORVU4Hr1G039410.27 , HORVU4Hr1G039410.28 , HORVU4Hr1G039410.29 , HORVU4Hr1G039410.15 , HORVU4Hr1G039410.14 , HORVU4Hr1G039410.17 , HORVU4Hr1G039410.16 , HORVU4Hr1G039410.11 , HORVU4Hr1G039410.10 , HORVU4Hr1G039410.13 , HORVU4Hr1G039410.12 , HORVU4Hr1G039410.19 , HORVU4Hr1G039410.18 , HORVU4Hr1G039410.1 , HORVU4Hr1G039410.3 , HORVU4Hr1G039410.2 , HORVU4Hr1G039410.5 , HORVU4Hr1G039410.4 , HORVU4Hr1G039410.7 , HORVU4Hr1G039410.6 , HORVU4Hr1G039410.9 , HORVU4Hr1G039410.8 , HORVU4Hr1G039410.33 , HORVU4Hr1G039410.32 , HORVU4Hr1G039410.31 , HORVU4Hr1G039410.30 , HORVU4Hr1G039410.37 , HORVU4Hr1G039410.36 , HORVU4Hr1G039410.35 , HORVU4Hr1G039410.34 , HORVU4Hr1G039410.38
Wheat TraesCS4D02G160300 , TraesCS4D02G160300 , TraesCS4D02G160300 , TraesCS4A02G162700 , TraesCS4B02G152100 , TraesCS4B02G152100
Populus PNT15950 , PNT15949 , PNT54902 , PNT54903 , PNT54904 , PNT24309 , PNT24308


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G143300 high mobility group, putative, expressed -
2 Sobic.007G058100 light-mediated development protein DET1, putative, expressed K10571: de-etiolated-1
3 Sobic.001G536700 expressed protein -
4 Sobic.008G129900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.010G231300 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
6 Sobic.008G033000 CAAX amino terminal protease family protein, putative, expressed K07052: uncharacterized protein
7 Sobic.006G235400 ELMO/CED-12 family protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
8 Sobic.001G263100 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
9 Sobic.001G258200 Ser/Thr protein phosphatase family protein, putative, expressed -
10 Sobic.003G341300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.001G180200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxisomal membrane protein, putative, expressed K13348: protein Mpv17
12 Sobic.005G217000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Os11bglu36 SFR2 homologue, expressed -
13 Sobic.004G151800 sucrose phosphate phos- phatase(PubMedID : 26616172)@sucrose-phosphatase, putative, expressed -
14 Sobic.004G082300 WD domain, G-beta repeat domain containing protein, expressed -
15 Sobic.009G038701 - -
16 Sobic.002G206300 tsi1-interacting protein TSIP1, putative, expressed -
17 Sobic.001G077300 thioredoxin, putative, expressed -
18 Sobic.004G151300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF803 domain containing, putative, expressed -
19 Sobic.006G090100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K09919: uncharacterized protein
20 Sobic.005G068700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAD kinase, putative, expressed K00858: ppnK, NAD+ kinase


Gene co-expression network
sample Sobic001G345100 Sobic001G345100 Sobic004G143300 Sobic004G143300 Sobic001G345100--Sobic004G143300 Sobic007G058100 Sobic007G058100 Sobic001G345100--Sobic007G058100 Sobic001G536700 Sobic001G536700 Sobic001G345100--Sobic001G536700 Sobic008G129900 Sobic008G129900 Sobic001G345100--Sobic008G129900 Sobic010G231300 Sobic010G231300 Sobic001G345100--Sobic010G231300 Sobic008G033000 Sobic008G033000 Sobic001G345100--Sobic008G033000 Sobic006G235400 Sobic006G235400 Sobic001G345100--Sobic006G235400 Sobic001G263100 Sobic001G263100 Sobic001G345100--Sobic001G263100 Sobic001G258200 Sobic001G258200 Sobic001G345100--Sobic001G258200 Sobic004G143300--Sobic001G345100 Sobic004G143300--Sobic007G058100 Sobic004G143300--Sobic010G231300 Sobic004G143300--Sobic008G129900 Sobic004G143300--Sobic006G235400 Sobic001G217900 Sobic001G217900 Sobic004G143300--Sobic001G217900 Sobic006G161500 Sobic006G161500 Sobic004G143300--Sobic006G161500 Sobic004G143300--Sobic001G263100 Sobic004G128900 Sobic004G128900 Sobic004G143300--Sobic004G128900 Sobic007G058100--Sobic001G263100 Sobic007G058100--Sobic001G217900 Sobic004G082300 Sobic004G082300 Sobic007G058100--Sobic004G082300 Sobic007G058100--Sobic001G258200 Sobic003G341300 Sobic003G341300 Sobic007G058100--Sobic003G341300 Sobic007G058100--Sobic008G129900 Sobic007G058100--Sobic004G143300 Sobic009G256100 Sobic009G256100 Sobic007G058100--Sobic009G256100 Sobic007G058100--Sobic001G345100 Sobic002G206300 Sobic002G206300 Sobic001G536700--Sobic002G206300 Sobic001G378100 Sobic001G378100 Sobic001G536700--Sobic001G378100 Sobic001G180200 Sobic001G180200 Sobic001G536700--Sobic001G180200 Sobic003G094100 Sobic003G094100 Sobic001G536700--Sobic003G094100 Sobic001G536700--Sobic003G341300 Sobic001G536700--Sobic001G345100 Sobic001G077300 Sobic001G077300 Sobic001G536700--Sobic001G077300 Sobic001G504400 Sobic001G504400 Sobic001G536700--Sobic001G504400 Sobic007G135800 Sobic007G135800 Sobic001G536700--Sobic007G135800 Sobic008G129900--Sobic010G231300 Sobic008G129900--Sobic008G033000 Sobic008G129900--Sobic001G258200 Sobic008G129900--Sobic001G217900 Sobic008G129900--Sobic006G235400 Sobic003G097600 Sobic003G097600 Sobic008G129900--Sobic003G097600 Sobic008G129900--Sobic001G263100 Sobic008G129900--Sobic002G206300 Sobic008G129900--Sobic003G341300 Sobic010G231300--Sobic008G129900 Sobic010G231300--Sobic006G235400 Sobic010G231300--Sobic001G217900 Sobic010G231300--Sobic001G263100 Sobic010G231300--Sobic006G161500 Sobic007G133000 Sobic007G133000 Sobic010G231300--Sobic007G133000 Sobic010G231300--Sobic003G341300 Sobic010G231300--Sobic001G180200 Sobic002G162400 Sobic002G162400 Sobic010G231300--Sobic002G162400 Sobic003G185900 Sobic003G185900 Sobic008G033000--Sobic003G185900 Sobic008G033000--Sobic008G129900 Sobic008G033000--Sobic001G258200 Sobic008G033000--Sobic001G504400 Sobic008G033000--Sobic001G217900 Sobic010G125833 Sobic010G125833 Sobic008G033000--Sobic010G125833 Sobic008G033000--Sobic002G206300 Sobic004G215800 Sobic004G215800 Sobic008G033000--Sobic004G215800 Sobic009G038701 Sobic009G038701 Sobic008G033000--Sobic009G038701 Sobic006G235400--Sobic010G231300 Sobic006G235400--Sobic001G077300 Sobic006G235400--Sobic004G128900 Sobic006G235400--Sobic003G341300 Sobic003G409700 Sobic003G409700 Sobic006G235400--Sobic003G409700 Sobic006G235400--Sobic008G129900 Sobic006G235400--Sobic006G161500 Sobic003G380200 Sobic003G380200 Sobic006G235400--Sobic003G380200 Sobic006G235400--Sobic001G180200 Sobic001G263100--Sobic007G058100 Sobic001G263100--Sobic010G231300 Sobic001G263100--Sobic008G129900 Sobic001G263100--Sobic002G162400 Sobic001G263100--Sobic001G180200 Sobic001G263100--Sobic001G217900 Sobic001G263100--Sobic003G341300 Sobic001G263100--Sobic002G206300 Sobic001G263100--Sobic006G235400 Sobic001G258200--Sobic003G185900 Sobic002G382700 Sobic002G382700 Sobic001G258200--Sobic002G382700 Sobic001G258200--Sobic008G129900 Sobic001G258200--Sobic001G504400 Sobic004G189800 Sobic004G189800 Sobic001G258200--Sobic004G189800 Sobic001G258200--Sobic008G033000 Sobic001G258200--Sobic002G206300 Sobic001G359300 Sobic001G359300 Sobic001G258200--Sobic001G359300 Sobic005G068700 Sobic005G068700 Sobic001G258200--Sobic005G068700
Octagon: transcription factors


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