Gene annotation
Transcriptome id Sobic.006G090100.1
Synonym Sb06g017540
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5Y8V5
Pfam PF04339
Panther DB PTHR31384 PTHR31384:SF34
NCBI CDD -
KEGG Orthology K09919; uncharacterized protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G23390 : -
RAP-DB (Rice) LOC_Os04g36062.1 : expressed protein
MaizeGDB (Corn) Zm00025a056123
Brachypodium KQJ82848 , KQJ82847
Barley HORVU2Hr1G077010.11 , HORVU2Hr1G077010.10 , HORVU2Hr1G077010.13 , HORVU2Hr1G077010.12 , HORVU2Hr1G077010.15 , HORVU2Hr1G077010.14 , HORVU2Hr1G077010.17 , HORVU2Hr1G077010.16 , HORVU2Hr1G077010.19 , HORVU2Hr1G077010.18 , HORVU2Hr1G077010.5 , HORVU2Hr1G077010.4 , HORVU2Hr1G077010.7 , HORVU2Hr1G077010.6 , HORVU2Hr1G077010.1 , HORVU2Hr1G077010.3 , HORVU2Hr1G077010.2 , HORVU2Hr1G077010.9 , HORVU2Hr1G077010.8 , HORVU2Hr1G077010.20 , HORVU2Hr1G077010.21
Wheat TraesCS2A02G309600 , TraesCS2A02G309600 , TraesCS2D02G307900 , TraesCS2D02G307900 , TraesCS2B02G326700 , TraesCS2B02G326700 , TraesCS2B02G326700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G207800 integral membrane protein, putative, expressed -
2 Sobic.001G283100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@lrgB-like family protein, expressed -
3 Sobic.001G077300 thioredoxin, putative, expressed -
4 Sobic.001G509200 "similar to 9,10-9',10' carotenoid cleavage dioxygenase 1"(PubMedID : 29862293)@carotenoid cleavage dioxygenase, putative, expressed K11159: carotenoid cleavage oxygenase
5 Sobic.009G073900 thioredoxin, putative, expressed -
6 Sobic.002G382700 heat shock protein DnaJ, putative, expressed -
7 Sobic.003G341300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.001G046000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.002G081400 ABC1 family domain containing protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
10 Sobic.007G157300 NAD dependent epimerase/dehydratase family protein, putative, expressed -
11 Sobic.003G003450 - K01177: beta-amylase
12 Sobic.001G393300 HAD-superfamily hydrolase, subfamily IA, variant 3 containing protein, expressed -
13 Sobic.005G179300 ABC transporter, ATP-binding protein, putative, expressed -
14 Sobic.003G094100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.007G135800 ATP-dependent Clp protease adaptor protein ClpS containing protein, expressed K06891: ATP-dependent Clp protease adaptor protein ClpS
16 Sobic.004G127800 AGC_PKA/PKG_like.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
17 Sobic.001G180200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxisomal membrane protein, putative, expressed K13348: protein Mpv17
18 Sobic.006G235400 ELMO/CED-12 family protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
19 Sobic.007G108900 APE1, putative, expressed -
20 Sobic.006G259600 methylthioribose kinase, putative, expressed K00899: 5-methylthioribose kinase


Gene co-expression network
sample Sobic006G090100 Sobic006G090100 Sobic001G207800 Sobic001G207800 Sobic006G090100--Sobic001G207800 Sobic001G283100 Sobic001G283100 Sobic006G090100--Sobic001G283100 Sobic001G077300 Sobic001G077300 Sobic006G090100--Sobic001G077300 Sobic001G509200 Sobic001G509200 Sobic006G090100--Sobic001G509200 Sobic009G073900 Sobic009G073900 Sobic006G090100--Sobic009G073900 Sobic002G382700 Sobic002G382700 Sobic006G090100--Sobic002G382700 Sobic003G341300 Sobic003G341300 Sobic006G090100--Sobic003G341300 Sobic001G046000 Sobic001G046000 Sobic006G090100--Sobic001G046000 Sobic002G081400 Sobic002G081400 Sobic006G090100--Sobic002G081400 Sobic001G207800--Sobic006G090100 Sobic001G207800--Sobic001G283100 Sobic001G207800--Sobic002G382700 Sobic001G207800--Sobic001G509200 Sobic001G207800--Sobic001G077300 Sobic007G108900 Sobic007G108900 Sobic001G207800--Sobic007G108900 Sobic001G207800--Sobic009G073900 Sobic001G207800--Sobic003G341300 Sobic007G157300 Sobic007G157300 Sobic001G207800--Sobic007G157300 Sobic001G283100--Sobic006G090100 Sobic003G094100 Sobic003G094100 Sobic001G283100--Sobic003G094100 Sobic001G283100--Sobic001G207800 Sobic001G283100--Sobic003G341300 Sobic001G283100--Sobic007G108900 Sobic001G393300 Sobic001G393300 Sobic001G283100--Sobic001G393300 Sobic001G283100--Sobic007G157300 Sobic001G283100--Sobic001G509200 Sobic001G283100--Sobic002G382700 Sobic001G077300--Sobic009G073900 Sobic001G077300--Sobic006G090100 Sobic006G235400 Sobic006G235400 Sobic001G077300--Sobic006G235400 Sobic004G127800 Sobic004G127800 Sobic001G077300--Sobic004G127800 Sobic001G359300 Sobic001G359300 Sobic001G077300--Sobic001G359300 Sobic009G093100 Sobic009G093100 Sobic001G077300--Sobic009G093100 Sobic001G077300--Sobic003G341300 Sobic006G212800 Sobic006G212800 Sobic001G077300--Sobic006G212800 Sobic003G003450 Sobic003G003450 Sobic001G077300--Sobic003G003450 Sobic007G135800 Sobic007G135800 Sobic001G509200--Sobic007G135800 Sobic004G103300 Sobic004G103300 Sobic001G509200--Sobic004G103300 Sobic001G509200--Sobic001G393300 Sobic001G509200--Sobic007G108900 Sobic007G166300 Sobic007G166300 Sobic001G509200--Sobic007G166300 Sobic001G509200--Sobic003G094100 Sobic006G213700 Sobic006G213700 Sobic001G509200--Sobic006G213700 Sobic001G509200--Sobic006G090100 Sobic001G509200--Sobic009G073900 Sobic009G073900--Sobic001G077300 Sobic009G073900--Sobic003G003450 Sobic009G073900--Sobic006G090100 Sobic009G073900--Sobic001G509200 Sobic007G087100 Sobic007G087100 Sobic009G073900--Sobic007G087100 Sobic009G073900--Sobic003G094100 Sobic009G073900--Sobic002G081400 Sobic009G073900--Sobic007G135800 Sobic009G073900--Sobic006G213700 Sobic002G382700--Sobic001G207800 Sobic001G258200 Sobic001G258200 Sobic002G382700--Sobic001G258200 Sobic002G382700--Sobic006G090100 Sobic002G382700--Sobic003G341300 Sobic002G382700--Sobic001G283100 Sobic007G058100 Sobic007G058100 Sobic002G382700--Sobic007G058100 Sobic002G382700--Sobic001G077300 Sobic002G162400 Sobic002G162400 Sobic002G382700--Sobic002G162400 Sobic007G227100 Sobic007G227100 Sobic002G382700--Sobic007G227100 Sobic001G180200 Sobic001G180200 Sobic003G341300--Sobic001G180200 Sobic003G341300--Sobic007G157300 Sobic003G341300--Sobic001G283100 Sobic003G409700 Sobic003G409700 Sobic003G341300--Sobic003G409700 Sobic003G341300--Sobic006G235400 Sobic003G341300--Sobic002G162400 Sobic003G341300--Sobic001G077300 Sobic003G341300--Sobic006G090100 Sobic003G341300--Sobic003G094100 Sobic009G225600 Sobic009G225600 Sobic001G046000--Sobic009G225600 Sobic001G485100 Sobic001G485100 Sobic001G046000--Sobic001G485100 Sobic010G104700 Sobic010G104700 Sobic001G046000--Sobic010G104700 Sobic002G047400 Sobic002G047400 Sobic001G046000--Sobic002G047400 Sobic003G186800 Sobic003G186800 Sobic001G046000--Sobic003G186800 Sobic010G101000 Sobic010G101000 Sobic001G046000--Sobic010G101000 Sobic001G046000--Sobic006G090100 Sobic004G153900 Sobic004G153900 Sobic001G046000--Sobic004G153900 Sobic006G191500 Sobic006G191500 Sobic001G046000--Sobic006G191500 Sobic004G317700 Sobic004G317700 Sobic002G081400--Sobic004G317700 Sobic004G271600 Sobic004G271600 Sobic002G081400--Sobic004G271600 Sobic002G081400--Sobic009G073900 Sobic002G081400--Sobic001G077300 Sobic002G081400--Sobic003G003450 Sobic002G081400--Sobic006G090100 Sobic002G081400--Sobic001G509200 Sobic007G124500 Sobic007G124500 Sobic002G081400--Sobic007G124500 Sobic009G170200 Sobic009G170200 Sobic002G081400--Sobic009G170200
Octagon: transcription factors


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