Gene annotation
Transcriptome id Sobic.002G081400.1
Synonym Sb02g006790
Functional annotation ABC1 family domain containing protein, putative, expressed
UniProt C5XDG3
Pfam PF03109
Panther DB PTHR10566 PTHR10566:SF41
NCBI CDD KOG1235; Predicted unusual protein kinase
KEGG Orthology K08869; ADCK, aarF domain-containing kinase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G05200 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os07g12530.1 : ABC1 family domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a045438
Brachypodium KQK07675
Barley HORVU7Hr1G054230.9 , HORVU7Hr1G054230.8 , HORVU7Hr1G054230.2 , HORVU7Hr1G054230.1 , HORVU7Hr1G054230.7 , HORVU7Hr1G054230.6 , HORVU7Hr1G054230.5 , HORVU7Hr1G054230.4 , HORVU7Hr1G054230.3 , HORVU7Hr1G054230.10
Wheat TraesCS7D02G261700 , TraesCS7B02G158700 , TraesCS7B02G158700 , TraesCS7B02G158700 , TraesCS7B02G158700 , TraesCS7B02G158700 , TraesCS7B02G158700 , TraesCS7A02G260700 , TraesCS7A02G260700 , TraesCS7A02G260700 , TraesCS7D02G261700 , TraesCS7D02G261700 , TraesCS7B02G158700 , TraesCS7D02G261700
Populus -


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cDNA sequences
Sobic.002G081400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G317700 tRNA synthetase class I, putative, expressed K01870: IARS, isoleucyl-tRNA synthetase
2 Sobic.004G271600 region found in RelA/SpoT proteins containing protein, expressed -
3 Sobic.009G073900 thioredoxin, putative, expressed -
4 Sobic.001G077300 thioredoxin, putative, expressed -
5 Sobic.003G003450 - K01177: beta-amylase
6 Sobic.006G090100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K09919: uncharacterized protein
7 Sobic.001G509200 "similar to 9,10-9',10' carotenoid cleavage dioxygenase 1"(PubMedID : 29862293)@carotenoid cleavage dioxygenase, putative, expressed K11159: carotenoid cleavage oxygenase
8 Sobic.007G124500 methyltransferase, putative, expressed -
9 Sobic.009G170200 translation initiation factor IF-2, chloroplast precursor, putative, expressed K02519: infB, translation initiation factor IF-2
10 Sobic.004G103300 Complex I intermediate-associated protein 30 domain containing protein, putative, expressed -
11 Sobic.001G207800 integral membrane protein, putative, expressed -
12 Sobic.007G087100 pentatricopeptide, putative, expressed -
13 Sobic.002G132400 -(PubMedID : 26465154)@expressed protein -
14 Sobic.010G100900 alanyl-tRNA synthetase, putative, expressed K01872: AARS, alanyl-tRNA synthetase
15 Sobic.004G300100 hydrolase, alpha/beta fold family domain containing protein, expressed K07019: uncharacterized protein
16 Sobic.002G356900 threonyl-tRNA synthetase, putative, expressed K01868: TARS, threonyl-tRNA synthetase
17 Sobic.006G232600 amine oxidase, flavin-containing, domain containing protein, expressed K02293: PDS, 15-cis-phytoene desaturase
18 Sobic.009G093100 OsAGSW1(Ortholog in rice:Li and Li 2015)(PubMedID : 31659923)@ ELMO/CED-12 family protein, putative, expressed -
19 Sobic.006G259600 methylthioribose kinase, putative, expressed K00899: 5-methylthioribose kinase
20 Sobic.004G127800 AGC_PKA/PKG_like.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -


Gene co-expression network
sample Sobic002G081400 Sobic002G081400 Sobic004G317700 Sobic004G317700 Sobic002G081400--Sobic004G317700 Sobic004G271600 Sobic004G271600 Sobic002G081400--Sobic004G271600 Sobic009G073900 Sobic009G073900 Sobic002G081400--Sobic009G073900 Sobic001G077300 Sobic001G077300 Sobic002G081400--Sobic001G077300 Sobic003G003450 Sobic003G003450 Sobic002G081400--Sobic003G003450 Sobic006G090100 Sobic006G090100 Sobic002G081400--Sobic006G090100 Sobic001G509200 Sobic001G509200 Sobic002G081400--Sobic001G509200 Sobic007G124500 Sobic007G124500 Sobic002G081400--Sobic007G124500 Sobic009G170200 Sobic009G170200 Sobic002G081400--Sobic009G170200 Sobic004G317700--Sobic002G081400 Sobic002G356900 Sobic002G356900 Sobic004G317700--Sobic002G356900 Sobic004G300100 Sobic004G300100 Sobic004G317700--Sobic004G300100 Sobic007G087100 Sobic007G087100 Sobic004G317700--Sobic007G087100 Sobic004G317700--Sobic009G073900 Sobic004G317700--Sobic003G003450 Sobic002G060800 Sobic002G060800 Sobic004G317700--Sobic002G060800 Sobic002G072400 Sobic002G072400 Sobic004G317700--Sobic002G072400 Sobic004G317700--Sobic007G124500 Sobic002G132400 Sobic002G132400 Sobic004G271600--Sobic002G132400 Sobic004G271600--Sobic002G081400 Sobic010G100900 Sobic010G100900 Sobic004G271600--Sobic010G100900 Sobic002G351200 Sobic002G351200 Sobic004G271600--Sobic002G351200 Sobic004G271600--Sobic007G124500 Sobic002G072500 Sobic002G072500 Sobic004G271600--Sobic002G072500 Sobic004G271600--Sobic006G090100 Sobic004G271600--Sobic001G509200 Sobic004G271600--Sobic002G060800 Sobic009G073900--Sobic001G077300 Sobic009G073900--Sobic003G003450 Sobic009G073900--Sobic006G090100 Sobic009G073900--Sobic001G509200 Sobic009G073900--Sobic007G087100 Sobic003G094100 Sobic003G094100 Sobic009G073900--Sobic003G094100 Sobic009G073900--Sobic002G081400 Sobic007G135800 Sobic007G135800 Sobic009G073900--Sobic007G135800 Sobic006G213700 Sobic006G213700 Sobic009G073900--Sobic006G213700 Sobic001G077300--Sobic009G073900 Sobic001G077300--Sobic006G090100 Sobic006G235400 Sobic006G235400 Sobic001G077300--Sobic006G235400 Sobic004G127800 Sobic004G127800 Sobic001G077300--Sobic004G127800 Sobic001G359300 Sobic001G359300 Sobic001G077300--Sobic001G359300 Sobic009G093100 Sobic009G093100 Sobic001G077300--Sobic009G093100 Sobic003G341300 Sobic003G341300 Sobic001G077300--Sobic003G341300 Sobic006G212800 Sobic006G212800 Sobic001G077300--Sobic006G212800 Sobic001G077300--Sobic003G003450 Sobic003G003450--Sobic009G073900 Sobic003G003450--Sobic001G077300 Sobic003G003450--Sobic001G509200 Sobic003G003450--Sobic006G213700 Sobic003G003450--Sobic002G081400 Sobic006G232600 Sobic006G232600 Sobic003G003450--Sobic006G232600 Sobic003G003450--Sobic006G090100 Sobic003G003450--Sobic007G087100 Sobic001G207800 Sobic001G207800 Sobic003G003450--Sobic001G207800 Sobic006G090100--Sobic001G207800 Sobic001G283100 Sobic001G283100 Sobic006G090100--Sobic001G283100 Sobic006G090100--Sobic001G077300 Sobic006G090100--Sobic001G509200 Sobic006G090100--Sobic009G073900 Sobic002G382700 Sobic002G382700 Sobic006G090100--Sobic002G382700 Sobic006G090100--Sobic003G341300 Sobic001G046000 Sobic001G046000 Sobic006G090100--Sobic001G046000 Sobic006G090100--Sobic002G081400 Sobic001G509200--Sobic007G135800 Sobic004G103300 Sobic004G103300 Sobic001G509200--Sobic004G103300 Sobic001G393300 Sobic001G393300 Sobic001G509200--Sobic001G393300 Sobic007G108900 Sobic007G108900 Sobic001G509200--Sobic007G108900 Sobic007G166300 Sobic007G166300 Sobic001G509200--Sobic007G166300 Sobic001G509200--Sobic003G094100 Sobic001G509200--Sobic006G213700 Sobic001G509200--Sobic006G090100 Sobic001G509200--Sobic009G073900 Sobic007G124500--Sobic002G072500 Sobic001G411100 Sobic001G411100 Sobic007G124500--Sobic001G411100 Sobic007G124500--Sobic007G166300 Sobic007G124500--Sobic001G509200 Sobic007G124500--Sobic010G100900 Sobic007G124500--Sobic002G351200 Sobic007G124500--Sobic004G103300 Sobic010G231500 Sobic010G231500 Sobic007G124500--Sobic010G231500 Sobic007G124500--Sobic001G393300 Sobic003G070900 Sobic003G070900 Sobic009G170200--Sobic003G070900 Sobic009G170200--Sobic006G232600 Sobic009G170200--Sobic007G087100 Sobic009G170200--Sobic004G103300 Sobic002G133900 Sobic002G133900 Sobic009G170200--Sobic002G133900 Sobic009G170200--Sobic001G077300 Sobic004G353100 Sobic004G353100 Sobic009G170200--Sobic004G353100 Sobic001G378100 Sobic001G378100 Sobic009G170200--Sobic001G378100 Sobic007G103400 Sobic007G103400 Sobic009G170200--Sobic007G103400
Octagon: transcription factors


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