Gene annotation
Transcriptome id Sobic.004G300100.1,Sobic.004G300100.2
Synonym Sb04g033370
Functional annotation hydrolase, alpha/beta fold family domain containing protein, expressed
UniProt C5XS33 , A0A194YS97
Pfam PF00561
Panther DB PTHR10794
NCBI CDD KOG1838; Alpha/beta hydrolase
KEGG Orthology K07019; uncharacterized protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G50790 : esterase/lipase/thioesterase family protein
RAP-DB (Rice) LOC_Os02g43340.2,LOC_Os02g43340.1 : hydrolase, alpha/beta fold family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a032168
Brachypodium KQK00552 , KQK00551
Barley HORVU6Hr1G061380.6 , HORVU6Hr1G061380.7 , HORVU6Hr1G061380.4 , HORVU6Hr1G061380.5 , HORVU6Hr1G061380.2 , HORVU6Hr1G061380.3 , HORVU6Hr1G061380.1 , HORVU6Hr1G061380.8 , HORVU6Hr1G061380.9
Wheat TraesCS6D02G222700 , TraesCS6D02G222700 , TraesCS6D02G222700 , TraesCS6A02G240500 , TraesCS6A02G240500 , TraesCS6A02G240500 , TraesCS6B02G284200 , TraesCS6B02G284200 , TraesCS6B02G284200
Populus -


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cDNA sequences
Sobic.004G300100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G231500 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
2 Sobic.002G356900 threonyl-tRNA synthetase, putative, expressed K01868: TARS, threonyl-tRNA synthetase
3 Sobic.004G317700 tRNA synthetase class I, putative, expressed K01870: IARS, isoleucyl-tRNA synthetase
4 Sobic.002G081400 ABC1 family domain containing protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
5 Sobic.004G271600 region found in RelA/SpoT proteins containing protein, expressed -
6 Sobic.009G170200 translation initiation factor IF-2, chloroplast precursor, putative, expressed K02519: infB, translation initiation factor IF-2
7 Sobic.002G132400 -(PubMedID : 26465154)@expressed protein -
8 Sobic.004G165900 SOUL heme-binding protein, putative, expressed -
9 Sobic.004G252500 OsProtIV1 - Putative Protease IV homologue@ Domain 2 is a SPH, expressed K04773: protease IV
10 Sobic.003G108900 -(PubMedID : 26465154)@peptidase, putative, expressed -
11 Sobic.001G220000 PPR repeat containing protein, expressed -
12 Sobic.004G207400 hydroxymethylbutenyl 4-diphosphate synthase, putative, expressed K03526: gcpE, (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
13 Sobic.007G010800 similar to Os01g0104100 protein(PubMedID : 29862293)@expressed protein -
14 Sobic.007G124500 methyltransferase, putative, expressed -
15 Sobic.005G028800 astaxanthin synthase KC28, putative, expressed -
16 Sobic.010G207100 methyltransferase domain containing protein, putative, expressed -
17 Sobic.007G087100 pentatricopeptide, putative, expressed -
18 Sobic.004G103300 Complex I intermediate-associated protein 30 domain containing protein, putative, expressed -
19 Sobic.006G097500 zeaxanthin epoxidase, chloroplast precursor, putative, expressed K09838: ZEP, zeaxanthin epoxidase
20 Sobic.002G072400 zeta-carotene desaturase, chloroplast/chromoplast precursor, putative, expressed K00514: ZDS, zeta-carotene desaturase


Gene co-expression network
sample Sobic004G300100 Sobic004G300100 Sobic010G231500 Sobic010G231500 Sobic004G300100--Sobic010G231500 Sobic002G356900 Sobic002G356900 Sobic004G300100--Sobic002G356900 Sobic004G317700 Sobic004G317700 Sobic004G300100--Sobic004G317700 Sobic002G081400 Sobic002G081400 Sobic004G300100--Sobic002G081400 Sobic004G271600 Sobic004G271600 Sobic004G300100--Sobic004G271600 Sobic009G170200 Sobic009G170200 Sobic004G300100--Sobic009G170200 Sobic002G132400 Sobic002G132400 Sobic004G300100--Sobic002G132400 Sobic004G165900 Sobic004G165900 Sobic004G300100--Sobic004G165900 Sobic004G252500 Sobic004G252500 Sobic004G300100--Sobic004G252500 Sobic009G004100 Sobic009G004100 Sobic010G231500--Sobic009G004100 Sobic006G097500 Sobic006G097500 Sobic010G231500--Sobic006G097500 Sobic010G231500--Sobic004G300100 Sobic004G103300 Sobic004G103300 Sobic010G231500--Sobic004G103300 Sobic007G124500 Sobic007G124500 Sobic010G231500--Sobic007G124500 Sobic005G028800 Sobic005G028800 Sobic010G231500--Sobic005G028800 Sobic004G124400 Sobic004G124400 Sobic010G231500--Sobic004G124400 Sobic001G368600 Sobic001G368600 Sobic010G231500--Sobic001G368600 Sobic010G231500--Sobic002G356900 Sobic010G100900 Sobic010G100900 Sobic002G356900--Sobic010G100900 Sobic007G087100 Sobic007G087100 Sobic002G356900--Sobic007G087100 Sobic002G356900--Sobic004G300100 Sobic003G380200 Sobic003G380200 Sobic002G356900--Sobic003G380200 Sobic002G356900--Sobic009G170200 Sobic007G010800 Sobic007G010800 Sobic002G356900--Sobic007G010800 Sobic004G268400 Sobic004G268400 Sobic002G356900--Sobic004G268400 Sobic002G356900--Sobic010G231500 Sobic002G356900--Sobic004G317700 Sobic004G317700--Sobic002G081400 Sobic004G317700--Sobic002G356900 Sobic004G317700--Sobic004G300100 Sobic004G317700--Sobic007G087100 Sobic009G073900 Sobic009G073900 Sobic004G317700--Sobic009G073900 Sobic003G003450 Sobic003G003450 Sobic004G317700--Sobic003G003450 Sobic002G060800 Sobic002G060800 Sobic004G317700--Sobic002G060800 Sobic002G072400 Sobic002G072400 Sobic004G317700--Sobic002G072400 Sobic004G317700--Sobic007G124500 Sobic002G081400--Sobic004G317700 Sobic002G081400--Sobic004G271600 Sobic002G081400--Sobic009G073900 Sobic001G077300 Sobic001G077300 Sobic002G081400--Sobic001G077300 Sobic002G081400--Sobic003G003450 Sobic006G090100 Sobic006G090100 Sobic002G081400--Sobic006G090100 Sobic001G509200 Sobic001G509200 Sobic002G081400--Sobic001G509200 Sobic002G081400--Sobic007G124500 Sobic002G081400--Sobic009G170200 Sobic004G271600--Sobic002G132400 Sobic004G271600--Sobic002G081400 Sobic004G271600--Sobic010G100900 Sobic002G351200 Sobic002G351200 Sobic004G271600--Sobic002G351200 Sobic004G271600--Sobic007G124500 Sobic002G072500 Sobic002G072500 Sobic004G271600--Sobic002G072500 Sobic004G271600--Sobic006G090100 Sobic004G271600--Sobic001G509200 Sobic004G271600--Sobic002G060800 Sobic003G070900 Sobic003G070900 Sobic009G170200--Sobic003G070900 Sobic006G232600 Sobic006G232600 Sobic009G170200--Sobic006G232600 Sobic009G170200--Sobic007G087100 Sobic009G170200--Sobic004G103300 Sobic002G133900 Sobic002G133900 Sobic009G170200--Sobic002G133900 Sobic009G170200--Sobic001G077300 Sobic004G353100 Sobic004G353100 Sobic009G170200--Sobic004G353100 Sobic001G378100 Sobic001G378100 Sobic009G170200--Sobic001G378100 Sobic007G103400 Sobic007G103400 Sobic009G170200--Sobic007G103400 Sobic002G132400--Sobic004G271600 Sobic002G132400--Sobic010G100900 Sobic002G132400--Sobic002G351200 Sobic002G132400--Sobic001G509200 Sobic007G135800 Sobic007G135800 Sobic002G132400--Sobic007G135800 Sobic002G132400--Sobic003G380200 Sobic002G132400--Sobic007G124500 Sobic002G132400--Sobic004G268400 Sobic002G408000 Sobic002G408000 Sobic002G132400--Sobic002G408000 Sobic004G165900--Sobic004G252500 Sobic003G108900 Sobic003G108900 Sobic004G165900--Sobic003G108900 Sobic004G165900--Sobic010G231500 Sobic004G165900--Sobic006G097500 Sobic001G118400 Sobic001G118400 Sobic004G165900--Sobic001G118400 Sobic004G165900--Sobic001G368600 Sobic004G165900--Sobic009G004100 Sobic006G025400 Sobic006G025400 Sobic004G165900--Sobic006G025400 Sobic002G061900 Sobic002G061900 Sobic004G165900--Sobic002G061900 Sobic004G252500--Sobic004G165900 Sobic004G252500--Sobic003G108900 Sobic004G252500--Sobic001G118400 Sobic004G252500--Sobic004G300100 Sobic004G252500--Sobic010G231500 Sobic004G252500--Sobic006G025400 Sobic004G252500--Sobic003G070900 Sobic004G252500--Sobic009G004100 Sobic003G125900 Sobic003G125900 Sobic004G252500--Sobic003G125900
Octagon: transcription factors


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