Gene annotation
Transcriptome id Sobic.007G010800.2
Synonym Sb07g001060
Functional annotation similar to Os01g0104100 protein (PubMedID : 29862293)
expressed protein
UniProt C5YLW5
Pfam PF13424
Panther DB PTHR14140 PTHR14140:SF31
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G54360 : zinc ion binding
RAP-DB (Rice) LOC_Os02g55200.2 : expressed protein
MaizeGDB (Corn) Zm00025a023842
Brachypodium KQK17335 , KQK13278 , KQK13276 , KQK13277
Barley HORVU3Hr1G014190.3 , HORVU3Hr1G014190.2 , HORVU3Hr1G014190.4 , HORVU3Hr1G014190.1
Wheat TraesCS3B02G093400 , TraesCS3D02G079000 , TraesCS3D02G079000 , TraesCS3A02G078500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G356900 threonyl-tRNA synthetase, putative, expressed K01868: TARS, threonyl-tRNA synthetase
2 Sobic.001G018000 amine oxidase, flavin-containing, domain containing protein, expressed -
3 Sobic.010G100900 alanyl-tRNA synthetase, putative, expressed K01872: AARS, alanyl-tRNA synthetase
4 Sobic.009G040400 WD domain, G-beta repeat domain containing protein, expressed K11801: DDB1- and CUL4-associated factor 11
5 Sobic.002G351200 hydrolase, alpha/beta fold family domain containing protein, expressed -
6 Sobic.003G003450 - K01177: beta-amylase
7 Sobic.004G268400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed -
8 Sobic.004G317700 tRNA synthetase class I, putative, expressed K01870: IARS, isoleucyl-tRNA synthetase
9 Sobic.003G186800 transporter, major facilitator family, putative, expressed -
10 Sobic.003G380200 SNARE associated Golgi protein, putative, expressed -
11 Sobic.004G300100 hydrolase, alpha/beta fold family domain containing protein, expressed K07019: uncharacterized protein
12 Sobic.008G088821 - K05356: SPS, all-trans-nonaprenyl-diphosphate synthase
13 Sobic.003G103300 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplast precursor, putative, expressed K00099: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
14 Sobic.009G225600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed -
15 Sobic.007G124500 methyltransferase, putative, expressed -
16 Sobic.009G119300 peptide chain release factor 2, putative, expressed -
17 Sobic.007G087100 pentatricopeptide, putative, expressed -
18 Sobic.002G138100 ACT domain containing protein, expressed -
19 Sobic.003G304300 expressed protein -
20 Sobic.001G015200 Unnamed(PubMedID : 24676859)@S1 RNA binding domain containing protein, expressed -


Gene co-expression network
sample Sobic007G010800 Sobic007G010800 Sobic002G356900 Sobic002G356900 Sobic007G010800--Sobic002G356900 Sobic001G018000 Sobic001G018000 Sobic007G010800--Sobic001G018000 Sobic010G100900 Sobic010G100900 Sobic007G010800--Sobic010G100900 Sobic009G040400 Sobic009G040400 Sobic007G010800--Sobic009G040400 Sobic002G351200 Sobic002G351200 Sobic007G010800--Sobic002G351200 Sobic003G003450 Sobic003G003450 Sobic007G010800--Sobic003G003450 Sobic004G268400 Sobic004G268400 Sobic007G010800--Sobic004G268400 Sobic004G317700 Sobic004G317700 Sobic007G010800--Sobic004G317700 Sobic003G186800 Sobic003G186800 Sobic007G010800--Sobic003G186800 Sobic002G356900--Sobic010G100900 Sobic007G087100 Sobic007G087100 Sobic002G356900--Sobic007G087100 Sobic004G300100 Sobic004G300100 Sobic002G356900--Sobic004G300100 Sobic003G380200 Sobic003G380200 Sobic002G356900--Sobic003G380200 Sobic009G170200 Sobic009G170200 Sobic002G356900--Sobic009G170200 Sobic002G356900--Sobic007G010800 Sobic002G356900--Sobic004G268400 Sobic010G231500 Sobic010G231500 Sobic002G356900--Sobic010G231500 Sobic002G356900--Sobic004G317700 Sobic001G018000--Sobic004G268400 Sobic001G018000--Sobic002G351200 Sobic007G016600 Sobic007G016600 Sobic001G018000--Sobic007G016600 Sobic010G101000 Sobic010G101000 Sobic001G018000--Sobic010G101000 Sobic004G267700 Sobic004G267700 Sobic001G018000--Sobic004G267700 Sobic001G411100 Sobic001G411100 Sobic001G018000--Sobic001G411100 Sobic002G030900 Sobic002G030900 Sobic001G018000--Sobic002G030900 Sobic003G304300 Sobic003G304300 Sobic001G018000--Sobic003G304300 Sobic001G018000--Sobic003G186800 Sobic010G100900--Sobic002G351200 Sobic010G100900--Sobic003G380200 Sobic002G132400 Sobic002G132400 Sobic010G100900--Sobic002G132400 Sobic010G100900--Sobic004G268400 Sobic010G100900--Sobic003G304300 Sobic010G100900--Sobic004G267700 Sobic004G271600 Sobic004G271600 Sobic010G100900--Sobic004G271600 Sobic010G100900--Sobic002G356900 Sobic004G128900 Sobic004G128900 Sobic010G100900--Sobic004G128900 Sobic009G040400--Sobic007G010800 Sobic005G132000 Sobic005G132000 Sobic009G040400--Sobic005G132000 Sobic003G105900 Sobic003G105900 Sobic009G040400--Sobic003G105900 Sobic005G201000 Sobic005G201000 Sobic009G040400--Sobic005G201000 Sobic003G029500 Sobic003G029500 Sobic009G040400--Sobic003G029500 Sobic010G092350 Sobic010G092350 Sobic009G040400--Sobic010G092350 Sobic002G275200 Sobic002G275200 Sobic009G040400--Sobic002G275200 Sobic009G040400--Sobic002G356900 Sobic002G138100 Sobic002G138100 Sobic009G040400--Sobic002G138100 Sobic002G351200--Sobic010G100900 Sobic002G351200--Sobic001G018000 Sobic002G351200--Sobic003G304300 Sobic002G351200--Sobic004G268400 Sobic002G351200--Sobic004G267700 Sobic002G351200--Sobic010G101000 Sobic002G351200--Sobic002G132400 Sobic002G351200--Sobic003G186800 Sobic002G213400 Sobic002G213400 Sobic002G351200--Sobic002G213400 Sobic009G073900 Sobic009G073900 Sobic003G003450--Sobic009G073900 Sobic001G077300 Sobic001G077300 Sobic003G003450--Sobic001G077300 Sobic001G509200 Sobic001G509200 Sobic003G003450--Sobic001G509200 Sobic006G213700 Sobic006G213700 Sobic003G003450--Sobic006G213700 Sobic002G081400 Sobic002G081400 Sobic003G003450--Sobic002G081400 Sobic006G232600 Sobic006G232600 Sobic003G003450--Sobic006G232600 Sobic006G090100 Sobic006G090100 Sobic003G003450--Sobic006G090100 Sobic003G003450--Sobic007G087100 Sobic001G207800 Sobic001G207800 Sobic003G003450--Sobic001G207800 Sobic004G268400--Sobic004G267700 Sobic004G268400--Sobic007G016600 Sobic004G268400--Sobic001G018000 Sobic004G268400--Sobic002G351200 Sobic004G268400--Sobic003G304300 Sobic004G268400--Sobic003G186800 Sobic004G268400--Sobic010G100900 Sobic004G268400--Sobic010G101000 Sobic004G268400--Sobic003G380200 Sobic004G317700--Sobic002G081400 Sobic004G317700--Sobic002G356900 Sobic004G317700--Sobic004G300100 Sobic004G317700--Sobic007G087100 Sobic004G317700--Sobic009G073900 Sobic004G317700--Sobic003G003450 Sobic002G060800 Sobic002G060800 Sobic004G317700--Sobic002G060800 Sobic002G072400 Sobic002G072400 Sobic004G317700--Sobic002G072400 Sobic007G124500 Sobic007G124500 Sobic004G317700--Sobic007G124500 Sobic003G186800--Sobic003G380200 Sobic003G186800--Sobic003G304300 Sobic009G225600 Sobic009G225600 Sobic003G186800--Sobic009G225600 Sobic006G191500 Sobic006G191500 Sobic003G186800--Sobic006G191500 Sobic001G485100 Sobic001G485100 Sobic003G186800--Sobic001G485100 Sobic003G186800--Sobic010G101000 Sobic003G186800--Sobic004G268400 Sobic002G047400 Sobic002G047400 Sobic003G186800--Sobic002G047400 Sobic003G186800--Sobic004G267700
Octagon: transcription factors


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