Gene annotation
Transcriptome id Sobic.009G119300.1
Synonym Sb09g018740
Functional annotation peptide chain release factor 2, putative, expressed
UniProt C5YXB1
Pfam PF00472 PF03462
Panther DB PTHR11075 PTHR11075:SF52
NCBI CDD KOG2726; Mitochondrial polypeptide chain release factor
KEGG Orthology -
Gene Ontology GO:0006415; translational termination GO:0003747translation release factor activity GO:0016149translation release factor activity, codon specific GO:0005737cytoplasm


Orthologs (automatic annotation)
TAIR AT3G57190 : peptide chain release factor, putative
RAP-DB (Rice) LOC_Os05g31160.1 : peptide chain release factor 2, putative, expressed
MaizeGDB (Corn) Zm00025a043499
Brachypodium KQK06582 , KQK06581 , PNT71406
Barley HORVU1Hr1G057640.9 , HORVU1Hr1G057640.8 , HORVU1Hr1G057640.1 , HORVU1Hr1G057640.3 , HORVU1Hr1G057640.2 , HORVU1Hr1G057640.5 , HORVU1Hr1G057640.4 , HORVU1Hr1G057640.7 , HORVU1Hr1G057640.6 , HORVU1Hr1G057640.18 , HORVU1Hr1G057640.15 , HORVU1Hr1G057640.14 , HORVU1Hr1G057640.17 , HORVU1Hr1G057640.16 , HORVU1Hr1G057640.10 , HORVU1Hr1G057640.13 , HORVU1Hr1G057640.12
Wheat TraesCS1D02G237600 , TraesCS1A02G234400 , TraesCS1A02G234400 , TraesCS1B02G249100 , TraesCS1B02G249100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G088821 - K05356: SPS, all-trans-nonaprenyl-diphosphate synthase
2 Sobic.001G015200 Unnamed(PubMedID : 24676859)@S1 RNA binding domain containing protein, expressed -
3 Sobic.010G101000 peptide methionine sulfoxide reductase msrB, putative, expressed K07305: peptide-methionine (R)-S-oxide reductase
4 Sobic.006G140500 photosystem-II repair protein, putative, expressed -
5 Sobic.003G186800 transporter, major facilitator family, putative, expressed -
6 Sobic.004G268400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed -
7 Sobic.001G018000 amine oxidase, flavin-containing, domain containing protein, expressed -
8 Sobic.003G103300 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplast precursor, putative, expressed K00099: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
9 Sobic.004G267700 hydrolase, alpha/beta fold family domain containing protein, expressed -
10 Sobic.003G304300 expressed protein -
11 Sobic.001G029600 -(PubMedID : 26465154)@expressed protein -
12 Sobic.002G030900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
13 Sobic.002G047400 "protein containing PDZ domain, a K-box domain, and a TPR region"(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@SHOOT1 protein, putative, expressed -
14 Sobic.007G166300 PPDK(PubMedID : 19549309)@lactate/malate dehydrogenase family protein(PubMedID : 26465154)@NADP-malete dehydrogenase(PubMedID : 26904072)@-(PubMedID : 26976818)@"enzyme exhibits extensions at both the N- and C-termini, Chloroplast Enzyme"(PubMedID : 2373367)@lactate/malate dehydrogenase, putative, expressed K00051: malate dehydrogenase (NADP+)
15 Sobic.002G351200 hydrolase, alpha/beta fold family domain containing protein, expressed -
16 Sobic.009G225600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed -
17 Sobic.010G100900 alanyl-tRNA synthetase, putative, expressed K01872: AARS, alanyl-tRNA synthetase
18 Sobic.003G380200 SNARE associated Golgi protein, putative, expressed -
19 Sobic.010G104700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@caleosin related protein, putative, expressed K17991: peroxygenase
20 Sobic.008G149100 B3 DNA binding domain containing protein, expressed -


Gene co-expression network
sample Sobic009G119300 Sobic009G119300 Sobic008G088821 Sobic008G088821 Sobic009G119300--Sobic008G088821 Sobic001G015200 Sobic001G015200 Sobic009G119300--Sobic001G015200 Sobic010G101000 Sobic010G101000 Sobic009G119300--Sobic010G101000 Sobic006G140500 Sobic006G140500 Sobic009G119300--Sobic006G140500 Sobic003G186800 Sobic003G186800 Sobic009G119300--Sobic003G186800 Sobic004G268400 Sobic004G268400 Sobic009G119300--Sobic004G268400 Sobic001G018000 Sobic001G018000 Sobic009G119300--Sobic001G018000 Sobic003G103300 Sobic003G103300 Sobic009G119300--Sobic003G103300 Sobic004G267700 Sobic004G267700 Sobic009G119300--Sobic004G267700 Sobic008G088821--Sobic001G015200 Sobic008G088821--Sobic006G140500 Sobic004G028300 Sobic004G028300 Sobic008G088821--Sobic004G028300 Sobic008G088821--Sobic009G119300 Sobic008G088821--Sobic003G103300 Sobic008G088821--Sobic001G018000 Sobic008G088821--Sobic004G268400 Sobic008G088821--Sobic010G101000 Sobic002G030900 Sobic002G030900 Sobic008G088821--Sobic002G030900 Sobic001G015200--Sobic008G088821 Sobic007G166300 Sobic007G166300 Sobic001G015200--Sobic007G166300 Sobic001G015200--Sobic003G103300 Sobic001G015200--Sobic006G140500 Sobic002G047400 Sobic002G047400 Sobic001G015200--Sobic002G047400 Sobic001G509200 Sobic001G509200 Sobic001G015200--Sobic001G509200 Sobic001G393300 Sobic001G393300 Sobic001G015200--Sobic001G393300 Sobic001G015200--Sobic009G119300 Sobic001G015200--Sobic010G101000 Sobic010G101000--Sobic004G267700 Sobic009G225600 Sobic009G225600 Sobic010G101000--Sobic009G225600 Sobic010G101000--Sobic002G030900 Sobic010G101000--Sobic003G186800 Sobic002G351200 Sobic002G351200 Sobic010G101000--Sobic002G351200 Sobic010G101000--Sobic001G018000 Sobic010G104700 Sobic010G104700 Sobic010G101000--Sobic010G104700 Sobic010G101000--Sobic004G268400 Sobic003G304300 Sobic003G304300 Sobic010G101000--Sobic003G304300 Sobic006G140500--Sobic008G088821 Sobic006G235350 Sobic006G235350 Sobic006G140500--Sobic006G235350 Sobic006G140500--Sobic001G015200 Sobic001G029600 Sobic001G029600 Sobic006G140500--Sobic001G029600 Sobic006G140500--Sobic009G119300 Sobic006G140500--Sobic004G028300 Sobic004G202200 Sobic004G202200 Sobic006G140500--Sobic004G202200 Sobic005G028800 Sobic005G028800 Sobic006G140500--Sobic005G028800 Sobic006G140500--Sobic007G166300 Sobic003G380200 Sobic003G380200 Sobic003G186800--Sobic003G380200 Sobic003G186800--Sobic003G304300 Sobic003G186800--Sobic009G225600 Sobic006G191500 Sobic006G191500 Sobic003G186800--Sobic006G191500 Sobic001G485100 Sobic001G485100 Sobic003G186800--Sobic001G485100 Sobic003G186800--Sobic010G101000 Sobic003G186800--Sobic004G268400 Sobic003G186800--Sobic002G047400 Sobic003G186800--Sobic004G267700 Sobic004G268400--Sobic004G267700 Sobic007G016600 Sobic007G016600 Sobic004G268400--Sobic007G016600 Sobic004G268400--Sobic001G018000 Sobic004G268400--Sobic002G351200 Sobic004G268400--Sobic003G304300 Sobic004G268400--Sobic003G186800 Sobic010G100900 Sobic010G100900 Sobic004G268400--Sobic010G100900 Sobic004G268400--Sobic010G101000 Sobic004G268400--Sobic003G380200 Sobic001G018000--Sobic004G268400 Sobic001G018000--Sobic002G351200 Sobic001G018000--Sobic007G016600 Sobic001G018000--Sobic010G101000 Sobic001G018000--Sobic004G267700 Sobic001G411100 Sobic001G411100 Sobic001G018000--Sobic001G411100 Sobic001G018000--Sobic002G030900 Sobic001G018000--Sobic003G304300 Sobic001G018000--Sobic003G186800 Sobic003G103300--Sobic001G015200 Sobic003G103300--Sobic008G088821 Sobic003G103300--Sobic004G268400 Sobic003G103300--Sobic010G101000 Sobic003G103300--Sobic001G018000 Sobic003G103300--Sobic001G411100 Sobic001G104700 Sobic001G104700 Sobic003G103300--Sobic001G104700 Sobic002G060800 Sobic002G060800 Sobic003G103300--Sobic002G060800 Sobic003G103300--Sobic002G351200 Sobic004G267700--Sobic004G268400 Sobic004G267700--Sobic003G304300 Sobic004G267700--Sobic010G101000 Sobic004G267700--Sobic007G016600 Sobic004G267700--Sobic003G380200 Sobic004G267700--Sobic002G351200 Sobic004G267700--Sobic001G018000 Sobic004G267700--Sobic003G186800 Sobic004G267700--Sobic010G100900
Octagon: transcription factors


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