Gene annotation
Transcriptome id Sobic.002G030900.1
Synonym Sb02g002750
Functional annotation oxidoreductase, aldo/keto reductase family protein, putative, expressed
UniProt C5X9G4
Pfam PF00248
Panther DB PTHR11732 PTHR11732:SF213
NCBI CDD KOG1575; Voltage-gated shaker-like K+ channel, subunit beta/KCNAB
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G06690 : NAD(P)-linked oxidoreductase superfamily protein
RAP-DB (Rice) LOC_Os07g05000.1 : oxidoreductase, aldo/keto reductase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a010741 , Zm00025a016172
Brachypodium KQK21023 , KQK21009
Barley HORVU2Hr1G060710.14 , HORVU2Hr1G060710.16 , HORVU2Hr1G060710.10 , HORVU2Hr1G060710.11 , HORVU2Hr1G060710.12 , HORVU2Hr1G060710.13 , HORVU2Hr1G060710.8 , HORVU2Hr1G060710.9 , HORVU2Hr1G060710.6 , HORVU2Hr1G060710.7 , HORVU2Hr1G060710.4 , HORVU2Hr1G060710.5 , HORVU2Hr1G060710.2 , HORVU2Hr1G060710.3 , HORVU2Hr1G060710.1
Wheat TraesCS2D02G254500 , TraesCS2A02G254100 , TraesCS2B02G268000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G101000 peptide methionine sulfoxide reductase msrB, putative, expressed K07305: peptide-methionine (R)-S-oxide reductase
2 Sobic.001G411100 expressed protein -
3 Sobic.001G018000 amine oxidase, flavin-containing, domain containing protein, expressed -
4 Sobic.004G268400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed -
5 Sobic.001G104700 expressed protein -
6 Sobic.004G267700 hydrolase, alpha/beta fold family domain containing protein, expressed -
7 Sobic.003G186800 transporter, major facilitator family, putative, expressed -
8 Sobic.007G124500 methyltransferase, putative, expressed -
9 Sobic.008G088821 - K05356: SPS, all-trans-nonaprenyl-diphosphate synthase
10 Sobic.002G351200 hydrolase, alpha/beta fold family domain containing protein, expressed -
11 Sobic.002G047400 "protein containing PDZ domain, a K-box domain, and a TPR region"(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@SHOOT1 protein, putative, expressed -
12 Sobic.001G015200 Unnamed(PubMedID : 24676859)@S1 RNA binding domain containing protein, expressed -
13 Sobic.003G103300 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplast precursor, putative, expressed K00099: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
14 Sobic.001G434000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.009G119300 peptide chain release factor 2, putative, expressed -
16 Sobic.007G016600 expressed protein -
17 Sobic.009G225600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed -
18 Sobic.004G125800 tocopherol cyclase, chloroplast precursor, putative, expressed K09834: VTE1, tocopherol cyclase
19 Sobic.001G104600 expressed protein -
20 Sobic.010G100900 alanyl-tRNA synthetase, putative, expressed K01872: AARS, alanyl-tRNA synthetase


Gene co-expression network
sample Sobic002G030900 Sobic002G030900 Sobic010G101000 Sobic010G101000 Sobic002G030900--Sobic010G101000 Sobic001G411100 Sobic001G411100 Sobic002G030900--Sobic001G411100 Sobic001G018000 Sobic001G018000 Sobic002G030900--Sobic001G018000 Sobic004G268400 Sobic004G268400 Sobic002G030900--Sobic004G268400 Sobic001G104700 Sobic001G104700 Sobic002G030900--Sobic001G104700 Sobic004G267700 Sobic004G267700 Sobic002G030900--Sobic004G267700 Sobic003G186800 Sobic003G186800 Sobic002G030900--Sobic003G186800 Sobic007G124500 Sobic007G124500 Sobic002G030900--Sobic007G124500 Sobic008G088821 Sobic008G088821 Sobic002G030900--Sobic008G088821 Sobic010G101000--Sobic004G267700 Sobic009G225600 Sobic009G225600 Sobic010G101000--Sobic009G225600 Sobic010G101000--Sobic002G030900 Sobic010G101000--Sobic003G186800 Sobic002G351200 Sobic002G351200 Sobic010G101000--Sobic002G351200 Sobic010G101000--Sobic001G018000 Sobic010G104700 Sobic010G104700 Sobic010G101000--Sobic010G104700 Sobic010G101000--Sobic004G268400 Sobic003G304300 Sobic003G304300 Sobic010G101000--Sobic003G304300 Sobic001G411100--Sobic007G124500 Sobic001G411100--Sobic001G018000 Sobic001G411100--Sobic002G030900 Sobic001G411100--Sobic001G104700 Sobic001G411100--Sobic004G268400 Sobic001G411100--Sobic010G101000 Sobic003G103300 Sobic003G103300 Sobic001G411100--Sobic003G103300 Sobic001G411100--Sobic002G351200 Sobic001G411100--Sobic004G267700 Sobic001G018000--Sobic004G268400 Sobic001G018000--Sobic002G351200 Sobic007G016600 Sobic007G016600 Sobic001G018000--Sobic007G016600 Sobic001G018000--Sobic010G101000 Sobic001G018000--Sobic004G267700 Sobic001G018000--Sobic001G411100 Sobic001G018000--Sobic002G030900 Sobic001G018000--Sobic003G304300 Sobic001G018000--Sobic003G186800 Sobic004G268400--Sobic004G267700 Sobic004G268400--Sobic007G016600 Sobic004G268400--Sobic001G018000 Sobic004G268400--Sobic002G351200 Sobic004G268400--Sobic003G304300 Sobic004G268400--Sobic003G186800 Sobic010G100900 Sobic010G100900 Sobic004G268400--Sobic010G100900 Sobic004G268400--Sobic010G101000 Sobic003G380200 Sobic003G380200 Sobic004G268400--Sobic003G380200 Sobic001G104700--Sobic001G411100 Sobic001G104700--Sobic002G030900 Sobic001G104600 Sobic001G104600 Sobic001G104700--Sobic001G104600 Sobic001G104700--Sobic003G103300 Sobic001G104700--Sobic001G018000 Sobic001G104700--Sobic010G101000 Sobic004G125800 Sobic004G125800 Sobic001G104700--Sobic004G125800 Sobic001G104700--Sobic004G268400 Sobic001G104700--Sobic004G267700 Sobic004G267700--Sobic004G268400 Sobic004G267700--Sobic003G304300 Sobic004G267700--Sobic010G101000 Sobic004G267700--Sobic007G016600 Sobic004G267700--Sobic003G380200 Sobic004G267700--Sobic002G351200 Sobic004G267700--Sobic001G018000 Sobic004G267700--Sobic003G186800 Sobic004G267700--Sobic010G100900 Sobic003G186800--Sobic003G380200 Sobic003G186800--Sobic003G304300 Sobic003G186800--Sobic009G225600 Sobic006G191500 Sobic006G191500 Sobic003G186800--Sobic006G191500 Sobic001G485100 Sobic001G485100 Sobic003G186800--Sobic001G485100 Sobic003G186800--Sobic010G101000 Sobic003G186800--Sobic004G268400 Sobic002G047400 Sobic002G047400 Sobic003G186800--Sobic002G047400 Sobic003G186800--Sobic004G267700 Sobic002G072500 Sobic002G072500 Sobic007G124500--Sobic002G072500 Sobic007G124500--Sobic001G411100 Sobic007G166300 Sobic007G166300 Sobic007G124500--Sobic007G166300 Sobic001G509200 Sobic001G509200 Sobic007G124500--Sobic001G509200 Sobic007G124500--Sobic010G100900 Sobic007G124500--Sobic002G351200 Sobic004G103300 Sobic004G103300 Sobic007G124500--Sobic004G103300 Sobic010G231500 Sobic010G231500 Sobic007G124500--Sobic010G231500 Sobic001G393300 Sobic001G393300 Sobic007G124500--Sobic001G393300 Sobic001G015200 Sobic001G015200 Sobic008G088821--Sobic001G015200 Sobic006G140500 Sobic006G140500 Sobic008G088821--Sobic006G140500 Sobic004G028300 Sobic004G028300 Sobic008G088821--Sobic004G028300 Sobic009G119300 Sobic009G119300 Sobic008G088821--Sobic009G119300 Sobic008G088821--Sobic003G103300 Sobic008G088821--Sobic001G018000 Sobic008G088821--Sobic004G268400 Sobic008G088821--Sobic010G101000 Sobic008G088821--Sobic002G030900
Octagon: transcription factors


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