Gene annotation
Transcriptome id Sobic.001G104700.1
Synonym Sb01g009350
Functional annotation expressed protein
UniProt C5WM03
Pfam PF13911
Panther DB PTHR28630 PTHR28630:SF4
NCBI CDD KOG4498; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G65840 : Thioredoxin superfamily protein
RAP-DB (Rice) LOC_Os03g51950.1 : expressed protein
MaizeGDB (Corn) Zm00025a007999 , Zm00025a016884
Brachypodium -
Barley HORVU4Hr1G010000.8 , HORVU4Hr1G010000.7 , HORVU4Hr1G010000.6 , HORVU4Hr1G010000.5 , HORVU4Hr1G010000.3 , HORVU4Hr1G010000.1 , HORVU4Hr1G010000.4 , HORVU4Hr1G010000.2
Wheat TraesCS4A02G255500 , TraesCS4D02G059200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G411100 expressed protein -
2 Sobic.002G030900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
3 Sobic.001G104600 expressed protein -
4 Sobic.003G103300 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplast precursor, putative, expressed K00099: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
5 Sobic.001G018000 amine oxidase, flavin-containing, domain containing protein, expressed -
6 Sobic.010G101000 peptide methionine sulfoxide reductase msrB, putative, expressed K07305: peptide-methionine (R)-S-oxide reductase
7 Sobic.004G125800 tocopherol cyclase, chloroplast precursor, putative, expressed K09834: VTE1, tocopherol cyclase
8 Sobic.004G268400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed -
9 Sobic.004G267700 hydrolase, alpha/beta fold family domain containing protein, expressed -
10 Sobic.001G434000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.007G124500 methyltransferase, putative, expressed -
12 Sobic.007G046950 - -
13 Sobic.002G351200 hydrolase, alpha/beta fold family domain containing protein, expressed -
14 Sobic.007G016600 expressed protein -
15 Sobic.006G020300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
16 Sobic.002G060800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein ycf45, putative, expressed -
17 Sobic.001G015200 Unnamed(PubMedID : 24676859)@S1 RNA binding domain containing protein, expressed -
18 Sobic.008G088821 - K05356: SPS, all-trans-nonaprenyl-diphosphate synthase
19 Sobic.010G207100 methyltransferase domain containing protein, putative, expressed -
20 Sobic.002G213400 expressed protein -


Gene co-expression network
sample Sobic001G104700 Sobic001G104700 Sobic001G411100 Sobic001G411100 Sobic001G104700--Sobic001G411100 Sobic002G030900 Sobic002G030900 Sobic001G104700--Sobic002G030900 Sobic001G104600 Sobic001G104600 Sobic001G104700--Sobic001G104600 Sobic003G103300 Sobic003G103300 Sobic001G104700--Sobic003G103300 Sobic001G018000 Sobic001G018000 Sobic001G104700--Sobic001G018000 Sobic010G101000 Sobic010G101000 Sobic001G104700--Sobic010G101000 Sobic004G125800 Sobic004G125800 Sobic001G104700--Sobic004G125800 Sobic004G268400 Sobic004G268400 Sobic001G104700--Sobic004G268400 Sobic004G267700 Sobic004G267700 Sobic001G104700--Sobic004G267700 Sobic007G124500 Sobic007G124500 Sobic001G411100--Sobic007G124500 Sobic001G411100--Sobic001G018000 Sobic001G411100--Sobic002G030900 Sobic001G411100--Sobic001G104700 Sobic001G411100--Sobic004G268400 Sobic001G411100--Sobic010G101000 Sobic001G411100--Sobic003G103300 Sobic002G351200 Sobic002G351200 Sobic001G411100--Sobic002G351200 Sobic001G411100--Sobic004G267700 Sobic002G030900--Sobic010G101000 Sobic002G030900--Sobic001G411100 Sobic002G030900--Sobic001G018000 Sobic002G030900--Sobic004G268400 Sobic002G030900--Sobic001G104700 Sobic002G030900--Sobic004G267700 Sobic003G186800 Sobic003G186800 Sobic002G030900--Sobic003G186800 Sobic002G030900--Sobic007G124500 Sobic008G088821 Sobic008G088821 Sobic002G030900--Sobic008G088821 Sobic001G104600--Sobic001G104700 Sobic001G015200 Sobic001G015200 Sobic001G104600--Sobic001G015200 Sobic007G046950 Sobic007G046950 Sobic001G104600--Sobic007G046950 Sobic001G104600--Sobic001G411100 Sobic001G104600--Sobic002G030900 Sobic001G104600--Sobic003G103300 Sobic005G172400 Sobic005G172400 Sobic001G104600--Sobic005G172400 Sobic002G370600 Sobic002G370600 Sobic001G104600--Sobic002G370600 Sobic001G104600--Sobic010G101000 Sobic003G103300--Sobic001G015200 Sobic003G103300--Sobic008G088821 Sobic003G103300--Sobic004G268400 Sobic003G103300--Sobic010G101000 Sobic003G103300--Sobic001G018000 Sobic003G103300--Sobic001G411100 Sobic003G103300--Sobic001G104700 Sobic002G060800 Sobic002G060800 Sobic003G103300--Sobic002G060800 Sobic003G103300--Sobic002G351200 Sobic001G018000--Sobic004G268400 Sobic001G018000--Sobic002G351200 Sobic007G016600 Sobic007G016600 Sobic001G018000--Sobic007G016600 Sobic001G018000--Sobic010G101000 Sobic001G018000--Sobic004G267700 Sobic001G018000--Sobic001G411100 Sobic001G018000--Sobic002G030900 Sobic003G304300 Sobic003G304300 Sobic001G018000--Sobic003G304300 Sobic001G018000--Sobic003G186800 Sobic010G101000--Sobic004G267700 Sobic009G225600 Sobic009G225600 Sobic010G101000--Sobic009G225600 Sobic010G101000--Sobic002G030900 Sobic010G101000--Sobic003G186800 Sobic010G101000--Sobic002G351200 Sobic010G101000--Sobic001G018000 Sobic010G104700 Sobic010G104700 Sobic010G101000--Sobic010G104700 Sobic010G101000--Sobic004G268400 Sobic010G101000--Sobic003G304300 Sobic004G125800--Sobic001G018000 Sobic004G125800--Sobic001G104700 Sobic004G125800--Sobic002G030900 Sobic004G125800--Sobic010G101000 Sobic004G125800--Sobic009G225600 Sobic004G125800--Sobic007G124500 Sobic004G125800--Sobic001G411100 Sobic004G125800--Sobic002G351200 Sobic001G046000 Sobic001G046000 Sobic004G125800--Sobic001G046000 Sobic004G268400--Sobic004G267700 Sobic004G268400--Sobic007G016600 Sobic004G268400--Sobic001G018000 Sobic004G268400--Sobic002G351200 Sobic004G268400--Sobic003G304300 Sobic004G268400--Sobic003G186800 Sobic010G100900 Sobic010G100900 Sobic004G268400--Sobic010G100900 Sobic004G268400--Sobic010G101000 Sobic003G380200 Sobic003G380200 Sobic004G268400--Sobic003G380200 Sobic004G267700--Sobic004G268400 Sobic004G267700--Sobic003G304300 Sobic004G267700--Sobic010G101000 Sobic004G267700--Sobic007G016600 Sobic004G267700--Sobic003G380200 Sobic004G267700--Sobic002G351200 Sobic004G267700--Sobic001G018000 Sobic004G267700--Sobic003G186800 Sobic004G267700--Sobic010G100900
Octagon: transcription factors


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