Gene annotation
Transcriptome id Sobic.001G018000.1
Synonym Sb01g001750
Functional annotation amine oxidase, flavin-containing, domain containing protein, expressed
UniProt C5WT16
Pfam PF01593
Panther DB PTHR10668 PTHR10668:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT1G57770 : FAD/NAD(P)-binding oxidoreductase family protein
RAP-DB (Rice) LOC_Os03g62510.1 : amine oxidase, flavin-containing, domain containing protein, expressed
MaizeGDB (Corn) Zm00025a016353
Brachypodium KQK12202 , KQK12203
Barley HORVU5Hr1G119790.12 , HORVU5Hr1G119790.8 , HORVU5Hr1G119790.11 , HORVU5Hr1G119790.14 , HORVU5Hr1G119790.15 , HORVU5Hr1G119790.9 , HORVU5Hr1G119790.2 , HORVU5Hr1G119790.3 , HORVU5Hr1G119790.1 , HORVU5Hr1G119790.6 , HORVU5Hr1G119790.7 , HORVU5Hr1G119790.4 , HORVU5Hr1G119790.5
Wheat TraesCS5D02G528500 , TraesCS5B02G529400 , TraesCSU02G062000 , TraesCS1A02G407600
Populus -


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cDNA sequences
Sobic.001G018000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G268400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed -
2 Sobic.002G351200 hydrolase, alpha/beta fold family domain containing protein, expressed -
3 Sobic.007G016600 expressed protein -
4 Sobic.010G101000 peptide methionine sulfoxide reductase msrB, putative, expressed K07305: peptide-methionine (R)-S-oxide reductase
5 Sobic.004G267700 hydrolase, alpha/beta fold family domain containing protein, expressed -
6 Sobic.001G411100 expressed protein -
7 Sobic.002G030900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
8 Sobic.003G304300 expressed protein -
9 Sobic.003G186800 transporter, major facilitator family, putative, expressed -
10 Sobic.003G103300 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplast precursor, putative, expressed K00099: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
11 Sobic.008G088821 - K05356: SPS, all-trans-nonaprenyl-diphosphate synthase
12 Sobic.010G100900 alanyl-tRNA synthetase, putative, expressed K01872: AARS, alanyl-tRNA synthetase
13 Sobic.009G225600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed -
14 Sobic.002G213400 expressed protein -
15 Sobic.009G119300 peptide chain release factor 2, putative, expressed -
16 Sobic.007G124500 methyltransferase, putative, expressed -
17 Sobic.001G434000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.001G104700 expressed protein -
19 Sobic.004G125800 tocopherol cyclase, chloroplast precursor, putative, expressed K09834: VTE1, tocopherol cyclase
20 Sobic.010G207100 methyltransferase domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G018000 Sobic001G018000 Sobic004G268400 Sobic004G268400 Sobic001G018000--Sobic004G268400 Sobic002G351200 Sobic002G351200 Sobic001G018000--Sobic002G351200 Sobic007G016600 Sobic007G016600 Sobic001G018000--Sobic007G016600 Sobic010G101000 Sobic010G101000 Sobic001G018000--Sobic010G101000 Sobic004G267700 Sobic004G267700 Sobic001G018000--Sobic004G267700 Sobic001G411100 Sobic001G411100 Sobic001G018000--Sobic001G411100 Sobic002G030900 Sobic002G030900 Sobic001G018000--Sobic002G030900 Sobic003G304300 Sobic003G304300 Sobic001G018000--Sobic003G304300 Sobic003G186800 Sobic003G186800 Sobic001G018000--Sobic003G186800 Sobic004G268400--Sobic004G267700 Sobic004G268400--Sobic007G016600 Sobic004G268400--Sobic001G018000 Sobic004G268400--Sobic002G351200 Sobic004G268400--Sobic003G304300 Sobic004G268400--Sobic003G186800 Sobic010G100900 Sobic010G100900 Sobic004G268400--Sobic010G100900 Sobic004G268400--Sobic010G101000 Sobic003G380200 Sobic003G380200 Sobic004G268400--Sobic003G380200 Sobic002G351200--Sobic010G100900 Sobic002G351200--Sobic001G018000 Sobic002G351200--Sobic003G304300 Sobic002G351200--Sobic004G268400 Sobic002G351200--Sobic004G267700 Sobic002G351200--Sobic010G101000 Sobic002G132400 Sobic002G132400 Sobic002G351200--Sobic002G132400 Sobic002G351200--Sobic003G186800 Sobic002G213400 Sobic002G213400 Sobic002G351200--Sobic002G213400 Sobic007G016600--Sobic004G268400 Sobic007G016600--Sobic004G267700 Sobic007G016600--Sobic001G018000 Sobic007G016600--Sobic003G304300 Sobic007G016600--Sobic002G351200 Sobic007G016600--Sobic010G100900 Sobic010G207100 Sobic010G207100 Sobic007G016600--Sobic010G207100 Sobic007G016600--Sobic003G186800 Sobic007G016600--Sobic003G380200 Sobic010G101000--Sobic004G267700 Sobic009G225600 Sobic009G225600 Sobic010G101000--Sobic009G225600 Sobic010G101000--Sobic002G030900 Sobic010G101000--Sobic003G186800 Sobic010G101000--Sobic002G351200 Sobic010G101000--Sobic001G018000 Sobic010G104700 Sobic010G104700 Sobic010G101000--Sobic010G104700 Sobic010G101000--Sobic004G268400 Sobic010G101000--Sobic003G304300 Sobic004G267700--Sobic004G268400 Sobic004G267700--Sobic003G304300 Sobic004G267700--Sobic010G101000 Sobic004G267700--Sobic007G016600 Sobic004G267700--Sobic003G380200 Sobic004G267700--Sobic002G351200 Sobic004G267700--Sobic001G018000 Sobic004G267700--Sobic003G186800 Sobic004G267700--Sobic010G100900 Sobic007G124500 Sobic007G124500 Sobic001G411100--Sobic007G124500 Sobic001G411100--Sobic001G018000 Sobic001G411100--Sobic002G030900 Sobic001G104700 Sobic001G104700 Sobic001G411100--Sobic001G104700 Sobic001G411100--Sobic004G268400 Sobic001G411100--Sobic010G101000 Sobic003G103300 Sobic003G103300 Sobic001G411100--Sobic003G103300 Sobic001G411100--Sobic002G351200 Sobic001G411100--Sobic004G267700 Sobic002G030900--Sobic010G101000 Sobic002G030900--Sobic001G411100 Sobic002G030900--Sobic001G018000 Sobic002G030900--Sobic004G268400 Sobic002G030900--Sobic001G104700 Sobic002G030900--Sobic004G267700 Sobic002G030900--Sobic003G186800 Sobic002G030900--Sobic007G124500 Sobic008G088821 Sobic008G088821 Sobic002G030900--Sobic008G088821 Sobic003G304300--Sobic004G267700 Sobic006G191500 Sobic006G191500 Sobic003G304300--Sobic006G191500 Sobic003G304300--Sobic002G351200 Sobic002G161400 Sobic002G161400 Sobic003G304300--Sobic002G161400 Sobic004G344600 Sobic004G344600 Sobic003G304300--Sobic004G344600 Sobic001G112900 Sobic001G112900 Sobic003G304300--Sobic001G112900 Sobic003G304300--Sobic003G186800 Sobic003G304300--Sobic003G380200 Sobic003G304300--Sobic004G268400 Sobic003G186800--Sobic003G380200 Sobic003G186800--Sobic003G304300 Sobic003G186800--Sobic009G225600 Sobic003G186800--Sobic006G191500 Sobic001G485100 Sobic001G485100 Sobic003G186800--Sobic001G485100 Sobic003G186800--Sobic010G101000 Sobic003G186800--Sobic004G268400 Sobic002G047400 Sobic002G047400 Sobic003G186800--Sobic002G047400 Sobic003G186800--Sobic004G267700
Octagon: transcription factors


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