Gene annotation
Transcriptome id Sobic.003G186800.1
Synonym PHT4, 4, ANTR2, Sb03g025190
Functional annotation transporter, major facilitator family, putative, expressed
UniProt A0A1B6Q442
Pfam PF05977
Panther DB PTHR11662 PTHR11662:SF255
NCBI CDD KOG2532; Permease of the major facilitator superfamily
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G00370 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os09g39680.1 : transporter, major facilitator family, putative, expressed
MaizeGDB (Corn) Zm00025a035192 , Zm00025a028794 , Zm00025a038330
Brachypodium KQJ91627
Barley HORVU4Hr1G000100.19 , HORVU4Hr1G000100.18 , HORVU4Hr1G000100.17 , HORVU4Hr1G000100.16 , HORVU4Hr1G000100.15 , HORVU4Hr1G000100.14 , HORVU4Hr1G000100.13 , HORVU4Hr1G000100.12 , HORVU4Hr1G000100.11 , HORVU4Hr1G000100.10 , HORVU4Hr1G000100.7 , HORVU4Hr1G000100.6 , HORVU4Hr1G000100.5 , HORVU4Hr1G000100.4 , HORVU4Hr1G000100.3 , HORVU4Hr1G000100.2 , HORVU4Hr1G000100.1 , HORVU4Hr1G000100.9 , HORVU4Hr1G000100.8 , HORVU4Hr1G000100.20 , HORVU4Hr1G000100.21
Wheat TraesCS4B02G003000 , TraesCS4D02G003100 , TraesCS4A02G311300
Populus -


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cDNA sequences
Sobic.003G186800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G380200 SNARE associated Golgi protein, putative, expressed -
2 Sobic.003G304300 expressed protein -
3 Sobic.009G225600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed -
4 Sobic.006G191500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed -
5 Sobic.001G485100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.010G101000 peptide methionine sulfoxide reductase msrB, putative, expressed K07305: peptide-methionine (R)-S-oxide reductase
7 Sobic.004G268400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed -
8 Sobic.002G047400 "protein containing PDZ domain, a K-box domain, and a TPR region"(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@SHOOT1 protein, putative, expressed -
9 Sobic.004G267700 hydrolase, alpha/beta fold family domain containing protein, expressed -
10 Sobic.001G046000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.002G351200 hydrolase, alpha/beta fold family domain containing protein, expressed -
12 Sobic.001G018000 amine oxidase, flavin-containing, domain containing protein, expressed -
13 Sobic.010G100900 alanyl-tRNA synthetase, putative, expressed K01872: AARS, alanyl-tRNA synthetase
14 Sobic.010G104700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@caleosin related protein, putative, expressed K17991: peroxygenase
15 Sobic.002G161400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed -
16 Sobic.009G119300 peptide chain release factor 2, putative, expressed -
17 Sobic.002G030900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
18 Sobic.004G344600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ ELMO/CED-12 family protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
19 Sobic.007G016600 expressed protein -
20 Sobic.003G428600 amidohydrolase, putative, expressed K07047: N-substituted formamide deformylase


Gene co-expression network
sample Sobic003G186800 Sobic003G186800 Sobic003G380200 Sobic003G380200 Sobic003G186800--Sobic003G380200 Sobic003G304300 Sobic003G304300 Sobic003G186800--Sobic003G304300 Sobic009G225600 Sobic009G225600 Sobic003G186800--Sobic009G225600 Sobic006G191500 Sobic006G191500 Sobic003G186800--Sobic006G191500 Sobic001G485100 Sobic001G485100 Sobic003G186800--Sobic001G485100 Sobic010G101000 Sobic010G101000 Sobic003G186800--Sobic010G101000 Sobic004G268400 Sobic004G268400 Sobic003G186800--Sobic004G268400 Sobic002G047400 Sobic002G047400 Sobic003G186800--Sobic002G047400 Sobic004G267700 Sobic004G267700 Sobic003G186800--Sobic004G267700 Sobic003G380200--Sobic006G191500 Sobic003G380200--Sobic003G186800 Sobic010G100900 Sobic010G100900 Sobic003G380200--Sobic010G100900 Sobic003G380200--Sobic003G304300 Sobic003G380200--Sobic004G267700 Sobic003G380200--Sobic001G485100 Sobic007G087100 Sobic007G087100 Sobic003G380200--Sobic007G087100 Sobic002G161400 Sobic002G161400 Sobic003G380200--Sobic002G161400 Sobic003G380200--Sobic004G268400 Sobic003G304300--Sobic004G267700 Sobic003G304300--Sobic006G191500 Sobic002G351200 Sobic002G351200 Sobic003G304300--Sobic002G351200 Sobic003G304300--Sobic002G161400 Sobic004G344600 Sobic004G344600 Sobic003G304300--Sobic004G344600 Sobic001G112900 Sobic001G112900 Sobic003G304300--Sobic001G112900 Sobic003G304300--Sobic003G186800 Sobic003G304300--Sobic003G380200 Sobic003G304300--Sobic004G268400 Sobic001G046000 Sobic001G046000 Sobic009G225600--Sobic001G046000 Sobic009G225600--Sobic010G101000 Sobic009G225600--Sobic003G186800 Sobic009G225600--Sobic002G047400 Sobic009G225600--Sobic001G485100 Sobic010G104700 Sobic010G104700 Sobic009G225600--Sobic010G104700 Sobic009G225600--Sobic002G351200 Sobic001G015200 Sobic001G015200 Sobic009G225600--Sobic001G015200 Sobic009G225600--Sobic003G380200 Sobic006G191500--Sobic002G161400 Sobic006G191500--Sobic003G380200 Sobic006G191500--Sobic001G485100 Sobic006G191500--Sobic003G304300 Sobic004G128900 Sobic004G128900 Sobic006G191500--Sobic004G128900 Sobic006G191500--Sobic004G344600 Sobic006G191500--Sobic003G186800 Sobic006G191500--Sobic010G100900 Sobic006G191500--Sobic001G046000 Sobic001G485100--Sobic006G191500 Sobic001G485100--Sobic002G161400 Sobic001G485100--Sobic003G380200 Sobic001G485100--Sobic003G186800 Sobic001G485100--Sobic001G046000 Sobic001G331600 Sobic001G331600 Sobic001G485100--Sobic001G331600 Sobic003G228300 Sobic003G228300 Sobic001G485100--Sobic003G228300 Sobic001G485100--Sobic009G225600 Sobic001G485100--Sobic004G344600 Sobic010G101000--Sobic004G267700 Sobic010G101000--Sobic009G225600 Sobic002G030900 Sobic002G030900 Sobic010G101000--Sobic002G030900 Sobic010G101000--Sobic003G186800 Sobic010G101000--Sobic002G351200 Sobic001G018000 Sobic001G018000 Sobic010G101000--Sobic001G018000 Sobic010G101000--Sobic010G104700 Sobic010G101000--Sobic004G268400 Sobic010G101000--Sobic003G304300 Sobic004G268400--Sobic004G267700 Sobic007G016600 Sobic007G016600 Sobic004G268400--Sobic007G016600 Sobic004G268400--Sobic001G018000 Sobic004G268400--Sobic002G351200 Sobic004G268400--Sobic003G304300 Sobic004G268400--Sobic003G186800 Sobic004G268400--Sobic010G100900 Sobic004G268400--Sobic010G101000 Sobic004G268400--Sobic003G380200 Sobic002G047400--Sobic009G225600 Sobic008G149100 Sobic008G149100 Sobic002G047400--Sobic008G149100 Sobic002G047400--Sobic003G186800 Sobic002G047400--Sobic001G046000 Sobic002G047400--Sobic003G228300 Sobic002G047400--Sobic001G015200 Sobic002G047400--Sobic010G101000 Sobic001G509200 Sobic001G509200 Sobic002G047400--Sobic001G509200 Sobic002G047400--Sobic001G485100 Sobic004G267700--Sobic004G268400 Sobic004G267700--Sobic003G304300 Sobic004G267700--Sobic010G101000 Sobic004G267700--Sobic007G016600 Sobic004G267700--Sobic003G380200 Sobic004G267700--Sobic002G351200 Sobic004G267700--Sobic001G018000 Sobic004G267700--Sobic003G186800 Sobic004G267700--Sobic010G100900
Octagon: transcription factors


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