Gene annotation
Transcriptome id Sobic.009G225600.1
Synonym Sb09g027890
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
Up-reguralion under heat (PubMedID : 24916767)
Up-reguralion under combine stress of drought and heat (PubMedID : 24916767)
2Fe-2S iron-sulfur cluster binding domain containing protein, expressed
UniProt A0A1B6PA15
Pfam PF00111
Panther DB PTHR23426 PTHR23426:SF32
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009055; electron transfer activity


Orthologs (automatic annotation)
TAIR AT4G32590 : 2Fe-2S ferredoxin-like superfamily protein
RAP-DB (Rice) LOC_Os05g48160.3 : 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a044493
Brachypodium KQK04985
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G046000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.010G101000 peptide methionine sulfoxide reductase msrB, putative, expressed K07305: peptide-methionine (R)-S-oxide reductase
3 Sobic.003G186800 transporter, major facilitator family, putative, expressed -
4 Sobic.002G047400 "protein containing PDZ domain, a K-box domain, and a TPR region"(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@SHOOT1 protein, putative, expressed -
5 Sobic.001G485100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.010G104700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@caleosin related protein, putative, expressed K17991: peroxygenase
7 Sobic.002G351200 hydrolase, alpha/beta fold family domain containing protein, expressed -
8 Sobic.001G015200 Unnamed(PubMedID : 24676859)@S1 RNA binding domain containing protein, expressed -
9 Sobic.003G380200 SNARE associated Golgi protein, putative, expressed -
10 Sobic.003G304300 expressed protein -
11 Sobic.006G191500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed -
12 Sobic.001G018000 amine oxidase, flavin-containing, domain containing protein, expressed -
13 Sobic.004G267700 hydrolase, alpha/beta fold family domain containing protein, expressed -
14 Sobic.002G060800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein ycf45, putative, expressed -
15 Sobic.004G268400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed -
16 Sobic.001G509200 "similar to 9,10-9',10' carotenoid cleavage dioxygenase 1"(PubMedID : 29862293)@carotenoid cleavage dioxygenase, putative, expressed K11159: carotenoid cleavage oxygenase
17 Sobic.006G090100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K09919: uncharacterized protein
18 Sobic.003G228300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450 72A1, putative, expressed -
19 Sobic.003G103300 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplast precursor, putative, expressed K00099: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
20 Sobic.002G161400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed -


Gene co-expression network
sample Sobic009G225600 Sobic009G225600 Sobic001G046000 Sobic001G046000 Sobic009G225600--Sobic001G046000 Sobic010G101000 Sobic010G101000 Sobic009G225600--Sobic010G101000 Sobic003G186800 Sobic003G186800 Sobic009G225600--Sobic003G186800 Sobic002G047400 Sobic002G047400 Sobic009G225600--Sobic002G047400 Sobic001G485100 Sobic001G485100 Sobic009G225600--Sobic001G485100 Sobic010G104700 Sobic010G104700 Sobic009G225600--Sobic010G104700 Sobic002G351200 Sobic002G351200 Sobic009G225600--Sobic002G351200 Sobic001G015200 Sobic001G015200 Sobic009G225600--Sobic001G015200 Sobic003G380200 Sobic003G380200 Sobic009G225600--Sobic003G380200 Sobic001G046000--Sobic009G225600 Sobic001G046000--Sobic001G485100 Sobic001G046000--Sobic010G104700 Sobic001G046000--Sobic002G047400 Sobic001G046000--Sobic003G186800 Sobic001G046000--Sobic010G101000 Sobic006G090100 Sobic006G090100 Sobic001G046000--Sobic006G090100 Sobic004G153900 Sobic004G153900 Sobic001G046000--Sobic004G153900 Sobic006G191500 Sobic006G191500 Sobic001G046000--Sobic006G191500 Sobic004G267700 Sobic004G267700 Sobic010G101000--Sobic004G267700 Sobic010G101000--Sobic009G225600 Sobic002G030900 Sobic002G030900 Sobic010G101000--Sobic002G030900 Sobic010G101000--Sobic003G186800 Sobic010G101000--Sobic002G351200 Sobic001G018000 Sobic001G018000 Sobic010G101000--Sobic001G018000 Sobic010G101000--Sobic010G104700 Sobic004G268400 Sobic004G268400 Sobic010G101000--Sobic004G268400 Sobic003G304300 Sobic003G304300 Sobic010G101000--Sobic003G304300 Sobic003G186800--Sobic003G380200 Sobic003G186800--Sobic003G304300 Sobic003G186800--Sobic009G225600 Sobic003G186800--Sobic006G191500 Sobic003G186800--Sobic001G485100 Sobic003G186800--Sobic010G101000 Sobic003G186800--Sobic004G268400 Sobic003G186800--Sobic002G047400 Sobic003G186800--Sobic004G267700 Sobic002G047400--Sobic009G225600 Sobic008G149100 Sobic008G149100 Sobic002G047400--Sobic008G149100 Sobic002G047400--Sobic003G186800 Sobic002G047400--Sobic001G046000 Sobic003G228300 Sobic003G228300 Sobic002G047400--Sobic003G228300 Sobic002G047400--Sobic001G015200 Sobic002G047400--Sobic010G101000 Sobic001G509200 Sobic001G509200 Sobic002G047400--Sobic001G509200 Sobic002G047400--Sobic001G485100 Sobic001G485100--Sobic006G191500 Sobic002G161400 Sobic002G161400 Sobic001G485100--Sobic002G161400 Sobic001G485100--Sobic003G380200 Sobic001G485100--Sobic003G186800 Sobic001G485100--Sobic001G046000 Sobic001G331600 Sobic001G331600 Sobic001G485100--Sobic001G331600 Sobic001G485100--Sobic003G228300 Sobic001G485100--Sobic009G225600 Sobic004G344600 Sobic004G344600 Sobic001G485100--Sobic004G344600 Sobic010G104700--Sobic001G046000 Sobic010G104700--Sobic003G304300 Sobic010G104700--Sobic010G101000 Sobic010G104700--Sobic004G344600 Sobic010G104700--Sobic004G153900 Sobic010G104700--Sobic009G225600 Sobic010G104700--Sobic002G161400 Sobic008G180800 Sobic008G180800 Sobic010G104700--Sobic008G180800 Sobic010G104700--Sobic002G351200 Sobic010G100900 Sobic010G100900 Sobic002G351200--Sobic010G100900 Sobic002G351200--Sobic001G018000 Sobic002G351200--Sobic003G304300 Sobic002G351200--Sobic004G268400 Sobic002G351200--Sobic004G267700 Sobic002G351200--Sobic010G101000 Sobic002G132400 Sobic002G132400 Sobic002G351200--Sobic002G132400 Sobic002G351200--Sobic003G186800 Sobic002G213400 Sobic002G213400 Sobic002G351200--Sobic002G213400 Sobic008G088821 Sobic008G088821 Sobic001G015200--Sobic008G088821 Sobic007G166300 Sobic007G166300 Sobic001G015200--Sobic007G166300 Sobic003G103300 Sobic003G103300 Sobic001G015200--Sobic003G103300 Sobic006G140500 Sobic006G140500 Sobic001G015200--Sobic006G140500 Sobic001G015200--Sobic002G047400 Sobic001G015200--Sobic001G509200 Sobic001G393300 Sobic001G393300 Sobic001G015200--Sobic001G393300 Sobic009G119300 Sobic009G119300 Sobic001G015200--Sobic009G119300 Sobic001G015200--Sobic010G101000 Sobic003G380200--Sobic006G191500 Sobic003G380200--Sobic003G186800 Sobic003G380200--Sobic010G100900 Sobic003G380200--Sobic003G304300 Sobic003G380200--Sobic004G267700 Sobic003G380200--Sobic001G485100 Sobic007G087100 Sobic007G087100 Sobic003G380200--Sobic007G087100 Sobic003G380200--Sobic002G161400 Sobic003G380200--Sobic004G268400
Octagon: transcription factors


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