Gene annotation
Transcriptome id Sobic.010G101000.1
Synonym MSRB1, ATMSRB1, Sb10g008790
Functional annotation peptide methionine sulfoxide reductase msrB, putative, expressed
UniProt C5Z7K5
Pfam PF01641
Panther DB PTHR10173 PTHR10173:SF38
NCBI CDD KOG0856; Predicted pilin-like transcription factor
KEGG Orthology K07305; peptide-methionine (R)-S-oxide reductase
Gene Ontology GO:0016671; oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor GO:0006979response to oxidative stress


Orthologs (automatic annotation)
TAIR AT1G53670 : methionine sulfoxide reductase B 1
RAP-DB (Rice) LOC_Os06g27760.1 : peptide methionine sulfoxide reductase msrB, putative, expressed
MaizeGDB (Corn) Zm00025a042654
Brachypodium KQK18341 , KQK18342
Barley -
Wheat TraesCS7B02G247500 , TraesCS7B02G247500 , TraesCS7D02G343600 , TraesCS7D02G343600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G267700 hydrolase, alpha/beta fold family domain containing protein, expressed -
2 Sobic.009G225600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed -
3 Sobic.002G030900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
4 Sobic.003G186800 transporter, major facilitator family, putative, expressed -
5 Sobic.002G351200 hydrolase, alpha/beta fold family domain containing protein, expressed -
6 Sobic.001G018000 amine oxidase, flavin-containing, domain containing protein, expressed -
7 Sobic.010G104700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@caleosin related protein, putative, expressed K17991: peroxygenase
8 Sobic.004G268400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed -
9 Sobic.003G304300 expressed protein -
10 Sobic.001G046000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.002G047400 "protein containing PDZ domain, a K-box domain, and a TPR region"(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@SHOOT1 protein, putative, expressed -
12 Sobic.003G380200 SNARE associated Golgi protein, putative, expressed -
13 Sobic.001G015200 Unnamed(PubMedID : 24676859)@S1 RNA binding domain containing protein, expressed -
14 Sobic.003G103300 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplast precursor, putative, expressed K00099: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
15 Sobic.009G119300 peptide chain release factor 2, putative, expressed -
16 Sobic.001G411100 expressed protein -
17 Sobic.010G100900 alanyl-tRNA synthetase, putative, expressed K01872: AARS, alanyl-tRNA synthetase
18 Sobic.008G088821 - K05356: SPS, all-trans-nonaprenyl-diphosphate synthase
19 Sobic.001G485100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.003G428600 amidohydrolase, putative, expressed K07047: N-substituted formamide deformylase


Gene co-expression network
sample Sobic010G101000 Sobic010G101000 Sobic004G267700 Sobic004G267700 Sobic010G101000--Sobic004G267700 Sobic009G225600 Sobic009G225600 Sobic010G101000--Sobic009G225600 Sobic002G030900 Sobic002G030900 Sobic010G101000--Sobic002G030900 Sobic003G186800 Sobic003G186800 Sobic010G101000--Sobic003G186800 Sobic002G351200 Sobic002G351200 Sobic010G101000--Sobic002G351200 Sobic001G018000 Sobic001G018000 Sobic010G101000--Sobic001G018000 Sobic010G104700 Sobic010G104700 Sobic010G101000--Sobic010G104700 Sobic004G268400 Sobic004G268400 Sobic010G101000--Sobic004G268400 Sobic003G304300 Sobic003G304300 Sobic010G101000--Sobic003G304300 Sobic004G267700--Sobic004G268400 Sobic004G267700--Sobic003G304300 Sobic004G267700--Sobic010G101000 Sobic007G016600 Sobic007G016600 Sobic004G267700--Sobic007G016600 Sobic003G380200 Sobic003G380200 Sobic004G267700--Sobic003G380200 Sobic004G267700--Sobic002G351200 Sobic004G267700--Sobic001G018000 Sobic004G267700--Sobic003G186800 Sobic010G100900 Sobic010G100900 Sobic004G267700--Sobic010G100900 Sobic001G046000 Sobic001G046000 Sobic009G225600--Sobic001G046000 Sobic009G225600--Sobic010G101000 Sobic009G225600--Sobic003G186800 Sobic002G047400 Sobic002G047400 Sobic009G225600--Sobic002G047400 Sobic001G485100 Sobic001G485100 Sobic009G225600--Sobic001G485100 Sobic009G225600--Sobic010G104700 Sobic009G225600--Sobic002G351200 Sobic001G015200 Sobic001G015200 Sobic009G225600--Sobic001G015200 Sobic009G225600--Sobic003G380200 Sobic002G030900--Sobic010G101000 Sobic001G411100 Sobic001G411100 Sobic002G030900--Sobic001G411100 Sobic002G030900--Sobic001G018000 Sobic002G030900--Sobic004G268400 Sobic001G104700 Sobic001G104700 Sobic002G030900--Sobic001G104700 Sobic002G030900--Sobic004G267700 Sobic002G030900--Sobic003G186800 Sobic007G124500 Sobic007G124500 Sobic002G030900--Sobic007G124500 Sobic008G088821 Sobic008G088821 Sobic002G030900--Sobic008G088821 Sobic003G186800--Sobic003G380200 Sobic003G186800--Sobic003G304300 Sobic003G186800--Sobic009G225600 Sobic006G191500 Sobic006G191500 Sobic003G186800--Sobic006G191500 Sobic003G186800--Sobic001G485100 Sobic003G186800--Sobic010G101000 Sobic003G186800--Sobic004G268400 Sobic003G186800--Sobic002G047400 Sobic003G186800--Sobic004G267700 Sobic002G351200--Sobic010G100900 Sobic002G351200--Sobic001G018000 Sobic002G351200--Sobic003G304300 Sobic002G351200--Sobic004G268400 Sobic002G351200--Sobic004G267700 Sobic002G351200--Sobic010G101000 Sobic002G132400 Sobic002G132400 Sobic002G351200--Sobic002G132400 Sobic002G351200--Sobic003G186800 Sobic002G213400 Sobic002G213400 Sobic002G351200--Sobic002G213400 Sobic001G018000--Sobic004G268400 Sobic001G018000--Sobic002G351200 Sobic001G018000--Sobic007G016600 Sobic001G018000--Sobic010G101000 Sobic001G018000--Sobic004G267700 Sobic001G018000--Sobic001G411100 Sobic001G018000--Sobic002G030900 Sobic001G018000--Sobic003G304300 Sobic001G018000--Sobic003G186800 Sobic010G104700--Sobic001G046000 Sobic010G104700--Sobic003G304300 Sobic010G104700--Sobic010G101000 Sobic004G344600 Sobic004G344600 Sobic010G104700--Sobic004G344600 Sobic004G153900 Sobic004G153900 Sobic010G104700--Sobic004G153900 Sobic010G104700--Sobic009G225600 Sobic002G161400 Sobic002G161400 Sobic010G104700--Sobic002G161400 Sobic008G180800 Sobic008G180800 Sobic010G104700--Sobic008G180800 Sobic010G104700--Sobic002G351200 Sobic004G268400--Sobic004G267700 Sobic004G268400--Sobic007G016600 Sobic004G268400--Sobic001G018000 Sobic004G268400--Sobic002G351200 Sobic004G268400--Sobic003G304300 Sobic004G268400--Sobic003G186800 Sobic004G268400--Sobic010G100900 Sobic004G268400--Sobic010G101000 Sobic004G268400--Sobic003G380200 Sobic003G304300--Sobic004G267700 Sobic003G304300--Sobic006G191500 Sobic003G304300--Sobic002G351200 Sobic003G304300--Sobic002G161400 Sobic003G304300--Sobic004G344600 Sobic001G112900 Sobic001G112900 Sobic003G304300--Sobic001G112900 Sobic003G304300--Sobic003G186800 Sobic003G304300--Sobic003G380200 Sobic003G304300--Sobic004G268400
Octagon: transcription factors


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