Gene annotation
Transcriptome id Sobic.003G428600.2,Sobic.003G428600.1
Synonym LAF3ISF2, LAF3, LAF3ISF1, Sb03g046070
Functional annotation amidohydrolase, putative, expressed
UniProt A0A1W0W1E9 , C5XHY0
Pfam PF01979
Panther DB PTHR22642 PTHR22642:SF2
NCBI CDD KOG3968; Atrazine chlorohydrolase/guanine deaminase
KEGG Orthology K07047; N-substituted formamide deformylase
Gene Ontology GO:0016787; hydrolase activity


Orthologs (automatic annotation)
TAIR AT3G55850 : Amidohydrolase family
RAP-DB (Rice) LOC_Os01g72350.1 : amidohydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a025949 , Zm00025a006902
Brachypodium KQK11587
Barley HORVU3Hr1G108620.18 , HORVU3Hr1G108620.19 , HORVU3Hr1G108620.10 , HORVU3Hr1G108620.11 , HORVU3Hr1G108620.12 , HORVU3Hr1G108620.13 , HORVU3Hr1G108620.14 , HORVU3Hr1G108620.15 , HORVU3Hr1G108620.16 , HORVU3Hr1G108620.17 , HORVU3Hr1G108620.29 , HORVU3Hr1G108620.28 , HORVU3Hr1G108620.25 , HORVU3Hr1G108620.24 , HORVU3Hr1G108620.27 , HORVU3Hr1G108620.26 , HORVU3Hr1G108620.21 , HORVU3Hr1G108620.20 , HORVU3Hr1G108620.23 , HORVU3Hr1G108620.22 , HORVU3Hr1G108620.32 , HORVU3Hr1G108620.33 , HORVU3Hr1G108620.30 , HORVU3Hr1G108620.31 , HORVU3Hr1G108620.36 , HORVU3Hr1G108620.37 , HORVU3Hr1G108620.34 , HORVU3Hr1G108620.35 , HORVU3Hr1G108620.38 , HORVU3Hr1G108620.39 , HORVU3Hr1G108620.8 , HORVU3Hr1G108620.9 , HORVU3Hr1G108620.2 , HORVU3Hr1G108620.3 , HORVU3Hr1G108620.1 , HORVU3Hr1G108620.6 , HORVU3Hr1G108620.7 , HORVU3Hr1G108620.4 , HORVU3Hr1G108620.5
Wheat TraesCS3D02G495100 , TraesCS3D02G495100 , TraesCS3B02G549400 , TraesCS3B02G549400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G304300 expressed protein -
2 Sobic.010G101000 peptide methionine sulfoxide reductase msrB, putative, expressed K07305: peptide-methionine (R)-S-oxide reductase
3 Sobic.003G186800 transporter, major facilitator family, putative, expressed -
4 Sobic.010G104700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@caleosin related protein, putative, expressed K17991: peroxygenase
5 Sobic.002G351200 hydrolase, alpha/beta fold family domain containing protein, expressed -
6 Sobic.009G225600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed -
7 Sobic.001G018000 amine oxidase, flavin-containing, domain containing protein, expressed -
8 Sobic.001G112900 expressed protein -
9 Sobic.004G268400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed -
10 Sobic.004G267700 hydrolase, alpha/beta fold family domain containing protein, expressed -
11 Sobic.003G426900 proline synthetase co-transcribed bacterial homolog protein, putative, expressed K06997: yggS, PLP dependent protein
12 Sobic.001G046000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.001G485100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.008G180800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@carotenoid biosynthesi(PubMedID : 18162592)@phytoene synthase, chloroplast precursor, putative, expressed K02291: 15-cis-phytoene synthase
15 Sobic.003G103300 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplast precursor, putative, expressed K00099: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
16 Sobic.009G119300 peptide chain release factor 2, putative, expressed -
17 Sobic.006G191500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed -
18 Sobic.003G380200 SNARE associated Golgi protein, putative, expressed -
19 Sobic.002G161400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed -
20 Sobic.004G344600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ ELMO/CED-12 family protein, putative, expressed K08869: ADCK, aarF domain-containing kinase


Gene co-expression network
sample Sobic003G428600 Sobic003G428600 Sobic003G304300 Sobic003G304300 Sobic003G428600--Sobic003G304300 Sobic010G101000 Sobic010G101000 Sobic003G428600--Sobic010G101000 Sobic003G186800 Sobic003G186800 Sobic003G428600--Sobic003G186800 Sobic010G104700 Sobic010G104700 Sobic003G428600--Sobic010G104700 Sobic002G351200 Sobic002G351200 Sobic003G428600--Sobic002G351200 Sobic009G225600 Sobic009G225600 Sobic003G428600--Sobic009G225600 Sobic001G018000 Sobic001G018000 Sobic003G428600--Sobic001G018000 Sobic001G112900 Sobic001G112900 Sobic003G428600--Sobic001G112900 Sobic004G268400 Sobic004G268400 Sobic003G428600--Sobic004G268400 Sobic004G267700 Sobic004G267700 Sobic003G304300--Sobic004G267700 Sobic006G191500 Sobic006G191500 Sobic003G304300--Sobic006G191500 Sobic003G304300--Sobic002G351200 Sobic002G161400 Sobic002G161400 Sobic003G304300--Sobic002G161400 Sobic004G344600 Sobic004G344600 Sobic003G304300--Sobic004G344600 Sobic003G304300--Sobic001G112900 Sobic003G304300--Sobic003G186800 Sobic003G380200 Sobic003G380200 Sobic003G304300--Sobic003G380200 Sobic003G304300--Sobic004G268400 Sobic010G101000--Sobic004G267700 Sobic010G101000--Sobic009G225600 Sobic002G030900 Sobic002G030900 Sobic010G101000--Sobic002G030900 Sobic010G101000--Sobic003G186800 Sobic010G101000--Sobic002G351200 Sobic010G101000--Sobic001G018000 Sobic010G101000--Sobic010G104700 Sobic010G101000--Sobic004G268400 Sobic010G101000--Sobic003G304300 Sobic003G186800--Sobic003G380200 Sobic003G186800--Sobic003G304300 Sobic003G186800--Sobic009G225600 Sobic003G186800--Sobic006G191500 Sobic001G485100 Sobic001G485100 Sobic003G186800--Sobic001G485100 Sobic003G186800--Sobic010G101000 Sobic003G186800--Sobic004G268400 Sobic002G047400 Sobic002G047400 Sobic003G186800--Sobic002G047400 Sobic003G186800--Sobic004G267700 Sobic001G046000 Sobic001G046000 Sobic010G104700--Sobic001G046000 Sobic010G104700--Sobic003G304300 Sobic010G104700--Sobic010G101000 Sobic010G104700--Sobic004G344600 Sobic004G153900 Sobic004G153900 Sobic010G104700--Sobic004G153900 Sobic010G104700--Sobic009G225600 Sobic010G104700--Sobic002G161400 Sobic008G180800 Sobic008G180800 Sobic010G104700--Sobic008G180800 Sobic010G104700--Sobic002G351200 Sobic010G100900 Sobic010G100900 Sobic002G351200--Sobic010G100900 Sobic002G351200--Sobic001G018000 Sobic002G351200--Sobic003G304300 Sobic002G351200--Sobic004G268400 Sobic002G351200--Sobic004G267700 Sobic002G351200--Sobic010G101000 Sobic002G132400 Sobic002G132400 Sobic002G351200--Sobic002G132400 Sobic002G351200--Sobic003G186800 Sobic002G213400 Sobic002G213400 Sobic002G351200--Sobic002G213400 Sobic009G225600--Sobic001G046000 Sobic009G225600--Sobic010G101000 Sobic009G225600--Sobic003G186800 Sobic009G225600--Sobic002G047400 Sobic009G225600--Sobic001G485100 Sobic009G225600--Sobic010G104700 Sobic009G225600--Sobic002G351200 Sobic001G015200 Sobic001G015200 Sobic009G225600--Sobic001G015200 Sobic009G225600--Sobic003G380200 Sobic001G018000--Sobic004G268400 Sobic001G018000--Sobic002G351200 Sobic007G016600 Sobic007G016600 Sobic001G018000--Sobic007G016600 Sobic001G018000--Sobic010G101000 Sobic001G018000--Sobic004G267700 Sobic001G411100 Sobic001G411100 Sobic001G018000--Sobic001G411100 Sobic001G018000--Sobic002G030900 Sobic001G018000--Sobic003G304300 Sobic001G018000--Sobic003G186800 Sobic003G339200 Sobic003G339200 Sobic001G112900--Sobic003G339200 Sobic001G112900--Sobic004G344600 Sobic001G112900--Sobic003G304300 Sobic001G112900--Sobic002G161400 Sobic010G113200 Sobic010G113200 Sobic001G112900--Sobic010G113200 Sobic005G002400 Sobic005G002400 Sobic001G112900--Sobic005G002400 Sobic001G112900--Sobic006G191500 Sobic003G162400 Sobic003G162400 Sobic001G112900--Sobic003G162400 Sobic001G112900--Sobic010G104700 Sobic004G268400--Sobic004G267700 Sobic004G268400--Sobic007G016600 Sobic004G268400--Sobic001G018000 Sobic004G268400--Sobic002G351200 Sobic004G268400--Sobic003G304300 Sobic004G268400--Sobic003G186800 Sobic004G268400--Sobic010G100900 Sobic004G268400--Sobic010G101000 Sobic004G268400--Sobic003G380200
Octagon: transcription factors


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