Gene annotation
Transcriptome id Sobic.007G016600.1
Synonym Sb07g001450
Functional annotation expressed protein
UniProt A0A1B6PF06
Pfam PF13225
Panther DB PTHR33591 PTHR33591:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G64680 : -
RAP-DB (Rice) LOC_Os08g02210.2 : expressed protein
MaizeGDB (Corn) Zm00025a040248
Brachypodium KQJ94858
Barley HORVU7Hr1G076030.9 , HORVU7Hr1G076030.8 , HORVU7Hr1G076030.1 , HORVU7Hr1G076030.3 , HORVU7Hr1G076030.2 , HORVU7Hr1G076030.5 , HORVU7Hr1G076030.4 , HORVU7Hr1G076030.7 , HORVU7Hr1G076030.6 , HORVU7Hr1G076030.10 , HORVU7Hr1G076030.11
Wheat TraesCS7D02G314600 , TraesCS7A02G317900 , TraesCS7A02G317900 , TraesCSU02G097100
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G268400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed -
2 Sobic.004G267700 hydrolase, alpha/beta fold family domain containing protein, expressed -
3 Sobic.001G018000 amine oxidase, flavin-containing, domain containing protein, expressed -
4 Sobic.003G304300 expressed protein -
5 Sobic.002G351200 hydrolase, alpha/beta fold family domain containing protein, expressed -
6 Sobic.010G100900 alanyl-tRNA synthetase, putative, expressed K01872: AARS, alanyl-tRNA synthetase
7 Sobic.010G207100 methyltransferase domain containing protein, putative, expressed -
8 Sobic.003G186800 transporter, major facilitator family, putative, expressed -
9 Sobic.003G380200 SNARE associated Golgi protein, putative, expressed -
10 Sobic.002G356900 threonyl-tRNA synthetase, putative, expressed K01868: TARS, threonyl-tRNA synthetase
11 Sobic.002G213400 expressed protein -
12 Sobic.010G101000 peptide methionine sulfoxide reductase msrB, putative, expressed K07305: peptide-methionine (R)-S-oxide reductase
13 Sobic.002G030900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
14 Sobic.009G123300 NAD dependent epimerase/dehydratase family protein, putative, expressed K06118: SQD1, UDP-sulfoquinovose synthase
15 Sobic.005G002400 expressed protein -
16 Sobic.003G154400 OsSCP3 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
17 Sobic.001G112900 expressed protein -
18 Sobic.001G411100 expressed protein -
19 Sobic.006G191500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed -
20 Sobic.001G434000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic007G016600 Sobic007G016600 Sobic004G268400 Sobic004G268400 Sobic007G016600--Sobic004G268400 Sobic004G267700 Sobic004G267700 Sobic007G016600--Sobic004G267700 Sobic001G018000 Sobic001G018000 Sobic007G016600--Sobic001G018000 Sobic003G304300 Sobic003G304300 Sobic007G016600--Sobic003G304300 Sobic002G351200 Sobic002G351200 Sobic007G016600--Sobic002G351200 Sobic010G100900 Sobic010G100900 Sobic007G016600--Sobic010G100900 Sobic010G207100 Sobic010G207100 Sobic007G016600--Sobic010G207100 Sobic003G186800 Sobic003G186800 Sobic007G016600--Sobic003G186800 Sobic003G380200 Sobic003G380200 Sobic007G016600--Sobic003G380200 Sobic004G268400--Sobic004G267700 Sobic004G268400--Sobic007G016600 Sobic004G268400--Sobic001G018000 Sobic004G268400--Sobic002G351200 Sobic004G268400--Sobic003G304300 Sobic004G268400--Sobic003G186800 Sobic004G268400--Sobic010G100900 Sobic010G101000 Sobic010G101000 Sobic004G268400--Sobic010G101000 Sobic004G268400--Sobic003G380200 Sobic004G267700--Sobic004G268400 Sobic004G267700--Sobic003G304300 Sobic004G267700--Sobic010G101000 Sobic004G267700--Sobic007G016600 Sobic004G267700--Sobic003G380200 Sobic004G267700--Sobic002G351200 Sobic004G267700--Sobic001G018000 Sobic004G267700--Sobic003G186800 Sobic004G267700--Sobic010G100900 Sobic001G018000--Sobic004G268400 Sobic001G018000--Sobic002G351200 Sobic001G018000--Sobic007G016600 Sobic001G018000--Sobic010G101000 Sobic001G018000--Sobic004G267700 Sobic001G411100 Sobic001G411100 Sobic001G018000--Sobic001G411100 Sobic002G030900 Sobic002G030900 Sobic001G018000--Sobic002G030900 Sobic001G018000--Sobic003G304300 Sobic001G018000--Sobic003G186800 Sobic003G304300--Sobic004G267700 Sobic006G191500 Sobic006G191500 Sobic003G304300--Sobic006G191500 Sobic003G304300--Sobic002G351200 Sobic002G161400 Sobic002G161400 Sobic003G304300--Sobic002G161400 Sobic004G344600 Sobic004G344600 Sobic003G304300--Sobic004G344600 Sobic001G112900 Sobic001G112900 Sobic003G304300--Sobic001G112900 Sobic003G304300--Sobic003G186800 Sobic003G304300--Sobic003G380200 Sobic003G304300--Sobic004G268400 Sobic002G351200--Sobic010G100900 Sobic002G351200--Sobic001G018000 Sobic002G351200--Sobic003G304300 Sobic002G351200--Sobic004G268400 Sobic002G351200--Sobic004G267700 Sobic002G351200--Sobic010G101000 Sobic002G132400 Sobic002G132400 Sobic002G351200--Sobic002G132400 Sobic002G351200--Sobic003G186800 Sobic002G213400 Sobic002G213400 Sobic002G351200--Sobic002G213400 Sobic010G100900--Sobic002G351200 Sobic010G100900--Sobic003G380200 Sobic010G100900--Sobic002G132400 Sobic010G100900--Sobic004G268400 Sobic010G100900--Sobic003G304300 Sobic010G100900--Sobic004G267700 Sobic004G271600 Sobic004G271600 Sobic010G100900--Sobic004G271600 Sobic002G356900 Sobic002G356900 Sobic010G100900--Sobic002G356900 Sobic004G128900 Sobic004G128900 Sobic010G100900--Sobic004G128900 Sobic010G207100--Sobic007G016600 Sobic010G207100--Sobic002G213400 Sobic010G207100--Sobic002G351200 Sobic010G207100--Sobic001G018000 Sobic010G207100--Sobic001G411100 Sobic007G124500 Sobic007G124500 Sobic010G207100--Sobic007G124500 Sobic010G207100--Sobic004G268400 Sobic010G207100--Sobic010G100900 Sobic010G207100--Sobic002G356900 Sobic003G186800--Sobic003G380200 Sobic003G186800--Sobic003G304300 Sobic009G225600 Sobic009G225600 Sobic003G186800--Sobic009G225600 Sobic003G186800--Sobic006G191500 Sobic001G485100 Sobic001G485100 Sobic003G186800--Sobic001G485100 Sobic003G186800--Sobic010G101000 Sobic003G186800--Sobic004G268400 Sobic002G047400 Sobic002G047400 Sobic003G186800--Sobic002G047400 Sobic003G186800--Sobic004G267700 Sobic003G380200--Sobic006G191500 Sobic003G380200--Sobic003G186800 Sobic003G380200--Sobic010G100900 Sobic003G380200--Sobic003G304300 Sobic003G380200--Sobic004G267700 Sobic003G380200--Sobic001G485100 Sobic007G087100 Sobic007G087100 Sobic003G380200--Sobic007G087100 Sobic003G380200--Sobic002G161400 Sobic003G380200--Sobic004G268400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.