Gene annotation
Transcriptome id Sobic.005G002400.1
Synonym Sb05g000365
Functional annotation expressed protein
UniProt A0A1Z5RGP0
Pfam -
Panther DB PTHR11638 PTHR11638:SF68
NCBI CDD KOG1051; Chaperone HSP104 and related ATP-dependent Clp proteases
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G29970 : Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein
RAP-DB (Rice) LOC_Os11g01330.1 : expressed protein
MaizeGDB (Corn) Zm00025a053652
Brachypodium PNT64270
Barley HORVU4Hr1G024950.6 , HORVU4Hr1G024950.7 , HORVU4Hr1G024950.4 , HORVU4Hr1G024950.5 , HORVU4Hr1G024950.2 , HORVU4Hr1G024950.3 , HORVU4Hr1G024950.1 , HORVU4Hr1G024950.8 , HORVU4Hr1G024950.9 , HORVU4Hr1G024950.14 , HORVU4Hr1G024950.15 , HORVU4Hr1G024950.10 , HORVU4Hr1G024950.11 , HORVU4Hr1G024950.12 , HORVU4Hr1G024950.13
Wheat TraesCS4A02G182800 , TraesCS4A02G182800 , TraesCS4D02G130600 , TraesCS4D02G130600 , TraesCS4B02G135800 , TraesCS4B02G135800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G002400 expressed protein -
2 Sobic.003G326000 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
3 Sobic.001G112900 expressed protein -
4 Sobic.001G181100 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@SCARECROW, putative, expressed -
5 Sobic.002G052100 early light-induced protein, chloroplast precursor, putative, expressed -
6 Sobic.004G190100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CPuORF19 - conserved peptide uORF-containing transcript, expressed -
7 Sobic.010G271800 leucine zipper protein-like, putative, expressed -
8 Sobic.006G020300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
9 Sobic.003G154400 OsSCP3 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
10 Sobic.007G016600 expressed protein -
11 Sobic.003G175800 - -
12 Sobic.004G214800 receptor-like protein kinase 5 precursor, putative, expressed -
13 Sobic.010G113200 UDP-glucoronosyl and UDP-glucosyl transferase, putative, expressed -
14 Sobic.003G162400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.003G339200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.003G304300 expressed protein -
17 Sobic.001G018000 amine oxidase, flavin-containing, domain containing protein, expressed -
18 Sobic.001G434000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.002G338800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type
20 Sobic.003G188200 transporter, major facilitator family, putative, expressed K02575: NRT, narK, nrtP, MFS transporter, NNP family, nitrate/nitrite transporter


Gene co-expression network
sample Sobic005G002400 Sobic005G002400 Sobic008G002400 Sobic008G002400 Sobic005G002400--Sobic008G002400 Sobic003G326000 Sobic003G326000 Sobic005G002400--Sobic003G326000 Sobic001G112900 Sobic001G112900 Sobic005G002400--Sobic001G112900 Sobic001G181100 Sobic001G181100 Sobic005G002400--Sobic001G181100 Sobic002G052100 Sobic002G052100 Sobic005G002400--Sobic002G052100 Sobic004G190100 Sobic004G190100 Sobic005G002400--Sobic004G190100 Sobic010G271800 Sobic010G271800 Sobic005G002400--Sobic010G271800 Sobic006G020300 Sobic006G020300 Sobic005G002400--Sobic006G020300 Sobic003G154400 Sobic003G154400 Sobic005G002400--Sobic003G154400 Sobic008G002400--Sobic005G002400 Sobic008G002400--Sobic003G326000 Sobic008G002400--Sobic001G181100 Sobic008G002400--Sobic010G271800 Sobic008G002400--Sobic006G020300 Sobic008G002400--Sobic001G112900 Sobic007G016600 Sobic007G016600 Sobic008G002400--Sobic007G016600 Sobic008G002400--Sobic004G190100 Sobic010G113200 Sobic010G113200 Sobic008G002400--Sobic010G113200 Sobic003G326000--Sobic010G271800 Sobic003G326000--Sobic005G002400 Sobic004G214800 Sobic004G214800 Sobic003G326000--Sobic004G214800 Sobic003G326000--Sobic008G002400 Sobic003G326000--Sobic001G181100 Sobic003G326000--Sobic002G052100 Sobic003G326000--Sobic004G190100 Sobic003G326000--Sobic001G112900 Sobic006G154800 Sobic006G154800 Sobic003G326000--Sobic006G154800 Sobic003G339200 Sobic003G339200 Sobic001G112900--Sobic003G339200 Sobic004G344600 Sobic004G344600 Sobic001G112900--Sobic004G344600 Sobic003G304300 Sobic003G304300 Sobic001G112900--Sobic003G304300 Sobic002G161400 Sobic002G161400 Sobic001G112900--Sobic002G161400 Sobic001G112900--Sobic010G113200 Sobic001G112900--Sobic005G002400 Sobic006G191500 Sobic006G191500 Sobic001G112900--Sobic006G191500 Sobic003G162400 Sobic003G162400 Sobic001G112900--Sobic003G162400 Sobic010G104700 Sobic010G104700 Sobic001G112900--Sobic010G104700 Sobic001G181100--Sobic002G052100 Sobic001G181100--Sobic005G002400 Sobic001G181100--Sobic003G326000 Sobic001G181100--Sobic010G271800 Sobic001G181100--Sobic004G214800 Sobic002G052000 Sobic002G052000 Sobic001G181100--Sobic002G052000 Sobic003G175800 Sobic003G175800 Sobic001G181100--Sobic003G175800 Sobic001G181100--Sobic008G002400 Sobic001G181100--Sobic006G020300 Sobic002G052100--Sobic002G052000 Sobic002G052100--Sobic001G181100 Sobic002G052100--Sobic004G214800 Sobic002G052100--Sobic005G002400 Sobic002G052100--Sobic003G175800 Sobic002G052100--Sobic003G154400 Sobic002G052100--Sobic006G020300 Sobic002G052100--Sobic003G326000 Sobic002G052100--Sobic010G271800 Sobic004G190100--Sobic005G002400 Sobic003G440300 Sobic003G440300 Sobic004G190100--Sobic003G440300 Sobic004G190100--Sobic003G326000 Sobic004G190100--Sobic008G002400 Sobic004G190100--Sobic001G112900 Sobic004G190100--Sobic010G271800 Sobic010G223200 Sobic010G223200 Sobic004G190100--Sobic010G223200 Sobic004G190100--Sobic003G162400 Sobic004G190100--Sobic006G154800 Sobic010G271800--Sobic003G326000 Sobic010G271800--Sobic001G181100 Sobic010G271800--Sobic005G002400 Sobic010G271800--Sobic002G052100 Sobic010G271800--Sobic004G214800 Sobic010G271800--Sobic008G002400 Sobic010G271800--Sobic006G154800 Sobic010G271800--Sobic004G190100 Sobic010G271800--Sobic001G112900 Sobic001G434000 Sobic001G434000 Sobic006G020300--Sobic001G434000 Sobic006G020300--Sobic005G002400 Sobic006G020300--Sobic002G052100 Sobic006G020300--Sobic003G154400 Sobic006G020300--Sobic003G175800 Sobic006G020300--Sobic003G326000 Sobic006G020300--Sobic004G214800 Sobic006G020300--Sobic010G104700 Sobic006G020300--Sobic001G181100 Sobic003G154400--Sobic002G052100 Sobic003G154400--Sobic005G002400 Sobic003G154400--Sobic006G020300 Sobic003G154400--Sobic007G016600 Sobic003G154400--Sobic003G175800 Sobic003G154400--Sobic002G052000 Sobic003G154400--Sobic008G002400 Sobic003G154400--Sobic001G181100 Sobic003G154400--Sobic004G214800
Octagon: transcription factors


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