Gene annotation
Transcriptome id Sobic.003G154400.1,Sobic.003G154400.3
Synonym Sb03g013480, scpl33
Functional annotation OsSCP3 - Putative Serine Carboxypeptidase homologue, expressed
UniProt A0A1W0VXF9 , A0A1W0VXG9
Pfam PF00450
Panther DB PTHR11802 PTHR11802:SF55
NCBI CDD KOG1282; Serine carboxypeptidases (lysosomal cathepsin A)
KEGG Orthology K16297; serine carboxypeptidase-like clade II
Gene Ontology GO:0006508; proteolysis GO:0004185serine-type carboxypeptidase activity


Orthologs (automatic annotation)
TAIR AT3G17180 : serine carboxypeptidase-like 33
RAP-DB (Rice) LOC_Os01g22980.2 : OsSCP3 - Putative Serine Carboxypeptidase homologue, expressed
MaizeGDB (Corn) Zm00025a024441
Brachypodium PNT70462 , KQK04225 , KQK04224 , KQK04226
Barley HORVU3Hr1G033550.1 , HORVU3Hr1G033550.3 , HORVU3Hr1G033550.2 , HORVU3Hr1G033550.5 , HORVU3Hr1G033550.4 , HORVU3Hr1G033550.7 , HORVU3Hr1G033550.6 , HORVU3Hr1G033550.9 , HORVU3Hr1G033550.8 , HORVU3Hr1G033550.20 , HORVU3Hr1G033550.19 , HORVU3Hr1G033550.18 , HORVU3Hr1G033550.15 , HORVU3Hr1G033550.14 , HORVU3Hr1G033550.17 , HORVU3Hr1G033550.16 , HORVU3Hr1G033550.11 , HORVU3Hr1G033550.10 , HORVU3Hr1G033550.13 , HORVU3Hr1G033550.12
Wheat TraesCS3D02G172900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G052100 early light-induced protein, chloroplast precursor, putative, expressed -
2 Sobic.005G002400 expressed protein -
3 Sobic.006G020300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
4 Sobic.007G016600 expressed protein -
5 Sobic.003G175800 - -
6 Sobic.002G052000 early light-induced protein, chloroplast precursor, putative, expressed -
7 Sobic.008G002400 expressed protein -
8 Sobic.001G181100 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@SCARECROW, putative, expressed -
9 Sobic.004G214800 receptor-like protein kinase 5 precursor, putative, expressed -
10 Sobic.010G178000 - -
11 Sobic.002G338800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type
12 Sobic.003G326000 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
13 Sobic.001G434000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.004G267700 hydrolase, alpha/beta fold family domain containing protein, expressed -
15 Sobic.001G112900 expressed protein -
16 Sobic.001G018000 amine oxidase, flavin-containing, domain containing protein, expressed -
17 Sobic.004G190100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CPuORF19 - conserved peptide uORF-containing transcript, expressed -
18 Sobic.002G213400 expressed protein -
19 Sobic.010G207100 methyltransferase domain containing protein, putative, expressed -
20 Sobic.004G268400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed -


Gene co-expression network
sample Sobic003G154400 Sobic003G154400 Sobic002G052100 Sobic002G052100 Sobic003G154400--Sobic002G052100 Sobic005G002400 Sobic005G002400 Sobic003G154400--Sobic005G002400 Sobic006G020300 Sobic006G020300 Sobic003G154400--Sobic006G020300 Sobic007G016600 Sobic007G016600 Sobic003G154400--Sobic007G016600 Sobic003G175800 Sobic003G175800 Sobic003G154400--Sobic003G175800 Sobic002G052000 Sobic002G052000 Sobic003G154400--Sobic002G052000 Sobic008G002400 Sobic008G002400 Sobic003G154400--Sobic008G002400 Sobic001G181100 Sobic001G181100 Sobic003G154400--Sobic001G181100 Sobic004G214800 Sobic004G214800 Sobic003G154400--Sobic004G214800 Sobic002G052100--Sobic002G052000 Sobic002G052100--Sobic001G181100 Sobic002G052100--Sobic004G214800 Sobic002G052100--Sobic005G002400 Sobic002G052100--Sobic003G175800 Sobic002G052100--Sobic003G154400 Sobic002G052100--Sobic006G020300 Sobic003G326000 Sobic003G326000 Sobic002G052100--Sobic003G326000 Sobic010G271800 Sobic010G271800 Sobic002G052100--Sobic010G271800 Sobic005G002400--Sobic008G002400 Sobic005G002400--Sobic003G326000 Sobic001G112900 Sobic001G112900 Sobic005G002400--Sobic001G112900 Sobic005G002400--Sobic001G181100 Sobic005G002400--Sobic002G052100 Sobic004G190100 Sobic004G190100 Sobic005G002400--Sobic004G190100 Sobic005G002400--Sobic010G271800 Sobic005G002400--Sobic006G020300 Sobic005G002400--Sobic003G154400 Sobic001G434000 Sobic001G434000 Sobic006G020300--Sobic001G434000 Sobic006G020300--Sobic005G002400 Sobic006G020300--Sobic002G052100 Sobic006G020300--Sobic003G154400 Sobic006G020300--Sobic003G175800 Sobic006G020300--Sobic003G326000 Sobic006G020300--Sobic004G214800 Sobic010G104700 Sobic010G104700 Sobic006G020300--Sobic010G104700 Sobic006G020300--Sobic001G181100 Sobic004G268400 Sobic004G268400 Sobic007G016600--Sobic004G268400 Sobic004G267700 Sobic004G267700 Sobic007G016600--Sobic004G267700 Sobic001G018000 Sobic001G018000 Sobic007G016600--Sobic001G018000 Sobic003G304300 Sobic003G304300 Sobic007G016600--Sobic003G304300 Sobic002G351200 Sobic002G351200 Sobic007G016600--Sobic002G351200 Sobic010G100900 Sobic010G100900 Sobic007G016600--Sobic010G100900 Sobic010G207100 Sobic010G207100 Sobic007G016600--Sobic010G207100 Sobic003G186800 Sobic003G186800 Sobic007G016600--Sobic003G186800 Sobic003G380200 Sobic003G380200 Sobic007G016600--Sobic003G380200 Sobic003G175800--Sobic002G052100 Sobic003G175800--Sobic006G020300 Sobic003G175800--Sobic001G181100 Sobic003G175800--Sobic005G002400 Sobic003G175800--Sobic003G154400 Sobic003G175800--Sobic002G052000 Sobic003G175800--Sobic008G002400 Sobic001G181000 Sobic001G181000 Sobic003G175800--Sobic001G181000 Sobic003G175800--Sobic004G214800 Sobic002G052000--Sobic002G052100 Sobic002G052000--Sobic001G181100 Sobic003G188200 Sobic003G188200 Sobic002G052000--Sobic003G188200 Sobic002G052000--Sobic003G175800 Sobic002G052000--Sobic003G154400 Sobic002G052000--Sobic004G214800 Sobic002G052000--Sobic005G002400 Sobic007G163433 Sobic007G163433 Sobic002G052000--Sobic007G163433 Sobic002G052000--Sobic010G271800 Sobic008G002400--Sobic005G002400 Sobic008G002400--Sobic003G326000 Sobic008G002400--Sobic001G181100 Sobic008G002400--Sobic010G271800 Sobic008G002400--Sobic006G020300 Sobic008G002400--Sobic001G112900 Sobic008G002400--Sobic007G016600 Sobic008G002400--Sobic004G190100 Sobic010G113200 Sobic010G113200 Sobic008G002400--Sobic010G113200 Sobic001G181100--Sobic002G052100 Sobic001G181100--Sobic005G002400 Sobic001G181100--Sobic003G326000 Sobic001G181100--Sobic010G271800 Sobic001G181100--Sobic004G214800 Sobic001G181100--Sobic002G052000 Sobic001G181100--Sobic003G175800 Sobic001G181100--Sobic008G002400 Sobic001G181100--Sobic006G020300 Sobic004G214800--Sobic003G326000 Sobic004G214800--Sobic002G052100 Sobic004G214800--Sobic001G181100 Sobic004G214800--Sobic010G271800 Sobic004G214800--Sobic005G002400 Sobic004G214800--Sobic001G112900 Sobic004G214800--Sobic006G020300 Sobic003G339200 Sobic003G339200 Sobic004G214800--Sobic003G339200 Sobic004G214800--Sobic003G175800
Octagon: transcription factors


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