Gene annotation
Transcriptome id Sobic.001G434000.1
Synonym Sb01g040820
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5WQV4
Pfam PF03222
Panther DB PTHR32195 PTHR32195:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003333; amino acid transmembrane transport


Orthologs (automatic annotation)
TAIR AT5G19500 : Tryptophan/tyrosine permease
RAP-DB (Rice) LOC_Os03g14915.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQK22524 , KQK22525 , PNT77714 , PNT77715 , PNT77716
Barley HORVU0Hr1G008640.16 , HORVU0Hr1G008640.17 , HORVU0Hr1G008640.6 , HORVU0Hr1G008640.7 , HORVU0Hr1G008640.1 , HORVU0Hr1G008640.9 , HORVU0Hr1G008640.14 , HORVU0Hr1G008640.12 , HORVU0Hr1G008640.13 , HORVU0Hr1G008640.11
Wheat TraesCS4B02G221100 , TraesCS4D02G221500 , TraesCS4A02G083100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G351200 hydrolase, alpha/beta fold family domain containing protein, expressed -
2 Sobic.006G020300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
3 Sobic.001G018000 amine oxidase, flavin-containing, domain containing protein, expressed -
4 Sobic.002G030900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
5 Sobic.002G213400 expressed protein -
6 Sobic.010G101000 peptide methionine sulfoxide reductase msrB, putative, expressed K07305: peptide-methionine (R)-S-oxide reductase
7 Sobic.010G104700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@caleosin related protein, putative, expressed K17991: peroxygenase
8 Sobic.004G267700 hydrolase, alpha/beta fold family domain containing protein, expressed -
9 Sobic.001G411100 expressed protein -
10 Sobic.003G304300 expressed protein -
11 Sobic.001G104700 expressed protein -
12 Sobic.010G207100 methyltransferase domain containing protein, putative, expressed -
13 Sobic.007G016600 expressed protein -
14 Sobic.004G268400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed -
15 Sobic.010G100900 alanyl-tRNA synthetase, putative, expressed K01872: AARS, alanyl-tRNA synthetase
16 Sobic.004G344600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ ELMO/CED-12 family protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
17 Sobic.002G060800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein ycf45, putative, expressed -
18 Sobic.005G002400 expressed protein -
19 Sobic.001G112900 expressed protein -
20 Sobic.001G046000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic001G434000 Sobic001G434000 Sobic002G351200 Sobic002G351200 Sobic001G434000--Sobic002G351200 Sobic006G020300 Sobic006G020300 Sobic001G434000--Sobic006G020300 Sobic001G018000 Sobic001G018000 Sobic001G434000--Sobic001G018000 Sobic002G030900 Sobic002G030900 Sobic001G434000--Sobic002G030900 Sobic002G213400 Sobic002G213400 Sobic001G434000--Sobic002G213400 Sobic010G101000 Sobic010G101000 Sobic001G434000--Sobic010G101000 Sobic010G104700 Sobic010G104700 Sobic001G434000--Sobic010G104700 Sobic004G267700 Sobic004G267700 Sobic001G434000--Sobic004G267700 Sobic001G411100 Sobic001G411100 Sobic001G434000--Sobic001G411100 Sobic010G100900 Sobic010G100900 Sobic002G351200--Sobic010G100900 Sobic002G351200--Sobic001G018000 Sobic003G304300 Sobic003G304300 Sobic002G351200--Sobic003G304300 Sobic004G268400 Sobic004G268400 Sobic002G351200--Sobic004G268400 Sobic002G351200--Sobic004G267700 Sobic002G351200--Sobic010G101000 Sobic002G132400 Sobic002G132400 Sobic002G351200--Sobic002G132400 Sobic003G186800 Sobic003G186800 Sobic002G351200--Sobic003G186800 Sobic002G351200--Sobic002G213400 Sobic006G020300--Sobic001G434000 Sobic005G002400 Sobic005G002400 Sobic006G020300--Sobic005G002400 Sobic002G052100 Sobic002G052100 Sobic006G020300--Sobic002G052100 Sobic003G154400 Sobic003G154400 Sobic006G020300--Sobic003G154400 Sobic003G175800 Sobic003G175800 Sobic006G020300--Sobic003G175800 Sobic003G326000 Sobic003G326000 Sobic006G020300--Sobic003G326000 Sobic004G214800 Sobic004G214800 Sobic006G020300--Sobic004G214800 Sobic006G020300--Sobic010G104700 Sobic001G181100 Sobic001G181100 Sobic006G020300--Sobic001G181100 Sobic001G018000--Sobic004G268400 Sobic001G018000--Sobic002G351200 Sobic007G016600 Sobic007G016600 Sobic001G018000--Sobic007G016600 Sobic001G018000--Sobic010G101000 Sobic001G018000--Sobic004G267700 Sobic001G018000--Sobic001G411100 Sobic001G018000--Sobic002G030900 Sobic001G018000--Sobic003G304300 Sobic001G018000--Sobic003G186800 Sobic002G030900--Sobic010G101000 Sobic002G030900--Sobic001G411100 Sobic002G030900--Sobic001G018000 Sobic002G030900--Sobic004G268400 Sobic001G104700 Sobic001G104700 Sobic002G030900--Sobic001G104700 Sobic002G030900--Sobic004G267700 Sobic002G030900--Sobic003G186800 Sobic007G124500 Sobic007G124500 Sobic002G030900--Sobic007G124500 Sobic008G088821 Sobic008G088821 Sobic002G030900--Sobic008G088821 Sobic002G213400--Sobic002G351200 Sobic010G207100 Sobic010G207100 Sobic002G213400--Sobic010G207100 Sobic002G213400--Sobic001G018000 Sobic002G213400--Sobic007G016600 Sobic002G213400--Sobic001G434000 Sobic002G213400--Sobic010G100900 Sobic002G213400--Sobic004G268400 Sobic002G213400--Sobic007G124500 Sobic002G213400--Sobic003G304300 Sobic010G101000--Sobic004G267700 Sobic009G225600 Sobic009G225600 Sobic010G101000--Sobic009G225600 Sobic010G101000--Sobic002G030900 Sobic010G101000--Sobic003G186800 Sobic010G101000--Sobic002G351200 Sobic010G101000--Sobic001G018000 Sobic010G101000--Sobic010G104700 Sobic010G101000--Sobic004G268400 Sobic010G101000--Sobic003G304300 Sobic001G046000 Sobic001G046000 Sobic010G104700--Sobic001G046000 Sobic010G104700--Sobic003G304300 Sobic010G104700--Sobic010G101000 Sobic004G344600 Sobic004G344600 Sobic010G104700--Sobic004G344600 Sobic004G153900 Sobic004G153900 Sobic010G104700--Sobic004G153900 Sobic010G104700--Sobic009G225600 Sobic002G161400 Sobic002G161400 Sobic010G104700--Sobic002G161400 Sobic008G180800 Sobic008G180800 Sobic010G104700--Sobic008G180800 Sobic010G104700--Sobic002G351200 Sobic004G267700--Sobic004G268400 Sobic004G267700--Sobic003G304300 Sobic004G267700--Sobic010G101000 Sobic004G267700--Sobic007G016600 Sobic003G380200 Sobic003G380200 Sobic004G267700--Sobic003G380200 Sobic004G267700--Sobic002G351200 Sobic004G267700--Sobic001G018000 Sobic004G267700--Sobic003G186800 Sobic004G267700--Sobic010G100900 Sobic001G411100--Sobic007G124500 Sobic001G411100--Sobic001G018000 Sobic001G411100--Sobic002G030900 Sobic001G411100--Sobic001G104700 Sobic001G411100--Sobic004G268400 Sobic001G411100--Sobic010G101000 Sobic003G103300 Sobic003G103300 Sobic001G411100--Sobic003G103300 Sobic001G411100--Sobic002G351200 Sobic001G411100--Sobic004G267700
Octagon: transcription factors


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