Gene annotation
Transcriptome id Sobic.010G207100.1
Synonym Sb10g025400
Functional annotation methyltransferase domain containing protein, putative, expressed
UniProt C5Z6R2
Pfam PF08241
Panther DB PTHR10108 PTHR10108:SF701
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008168; methyltransferase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT2G41040 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os06g43800.1 : methyltransferase domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a042060
Brachypodium KQK16797
Barley HORVU7Hr1G114960.1 , HORVU7Hr1G114960.2 , HORVU7Hr1G114960.3 , HORVU7Hr1G114960.4 , HORVU7Hr1G114960.5 , HORVU7Hr1G114960.6 , HORVU7Hr1G114960.7 , HORVU7Hr1G114960.8 , HORVU7Hr1G114960.9 , HORVU7Hr1G114960.12 , HORVU7Hr1G114960.10 , HORVU7Hr1G114960.13 , HORVU7Hr1G114960.11 , HORVU7Hr1G114960.14 , HORVU7Hr1G114960.15
Wheat TraesCS7A02G513200 , TraesCS7A02G514200 , TraesCS7A02G514200 , TraesCS7D02G398300 , TraesCS7D02G398300 , TraesCS7B02G424400 , TraesCS7B02G430800 , TraesCS7D02G502700 , TraesCS7B02G425600 , TraesCS7D02G490800 , TraesCS7D02G490800 , TraesCS7B02G429800 , TraesCS7B02G426900
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G016600 expressed protein -
2 Sobic.002G213400 expressed protein -
3 Sobic.002G351200 hydrolase, alpha/beta fold family domain containing protein, expressed -
4 Sobic.001G018000 amine oxidase, flavin-containing, domain containing protein, expressed -
5 Sobic.001G411100 expressed protein -
6 Sobic.007G124500 methyltransferase, putative, expressed -
7 Sobic.004G268400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed -
8 Sobic.010G100900 alanyl-tRNA synthetase, putative, expressed K01872: AARS, alanyl-tRNA synthetase
9 Sobic.002G356900 threonyl-tRNA synthetase, putative, expressed K01868: TARS, threonyl-tRNA synthetase
10 Sobic.001G434000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.004G267700 hydrolase, alpha/beta fold family domain containing protein, expressed -
12 Sobic.002G132400 -(PubMedID : 26465154)@expressed protein -
13 Sobic.004G271600 region found in RelA/SpoT proteins containing protein, expressed -
14 Sobic.010G231500 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
15 Sobic.004G300100 hydrolase, alpha/beta fold family domain containing protein, expressed K07019: uncharacterized protein
16 Sobic.009G004100 -(PubMedID : 26976818)@uncharacterized kinase mug58, putative, expressed K15918: D-glycerate 3-kinase
17 Sobic.002G030900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
18 Sobic.010G223200 OsFtsH2 FtsH protease, homologue of AtFtsH2/8, expressed K03798: ftsH, cell division protease FtsH
19 Sobic.001G104700 expressed protein -
20 Sobic.002G060800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein ycf45, putative, expressed -


Gene co-expression network
sample Sobic010G207100 Sobic010G207100 Sobic007G016600 Sobic007G016600 Sobic010G207100--Sobic007G016600 Sobic002G213400 Sobic002G213400 Sobic010G207100--Sobic002G213400 Sobic002G351200 Sobic002G351200 Sobic010G207100--Sobic002G351200 Sobic001G018000 Sobic001G018000 Sobic010G207100--Sobic001G018000 Sobic001G411100 Sobic001G411100 Sobic010G207100--Sobic001G411100 Sobic007G124500 Sobic007G124500 Sobic010G207100--Sobic007G124500 Sobic004G268400 Sobic004G268400 Sobic010G207100--Sobic004G268400 Sobic010G100900 Sobic010G100900 Sobic010G207100--Sobic010G100900 Sobic002G356900 Sobic002G356900 Sobic010G207100--Sobic002G356900 Sobic007G016600--Sobic004G268400 Sobic004G267700 Sobic004G267700 Sobic007G016600--Sobic004G267700 Sobic007G016600--Sobic001G018000 Sobic003G304300 Sobic003G304300 Sobic007G016600--Sobic003G304300 Sobic007G016600--Sobic002G351200 Sobic007G016600--Sobic010G100900 Sobic007G016600--Sobic010G207100 Sobic003G186800 Sobic003G186800 Sobic007G016600--Sobic003G186800 Sobic003G380200 Sobic003G380200 Sobic007G016600--Sobic003G380200 Sobic002G213400--Sobic002G351200 Sobic002G213400--Sobic010G207100 Sobic002G213400--Sobic001G018000 Sobic002G213400--Sobic007G016600 Sobic001G434000 Sobic001G434000 Sobic002G213400--Sobic001G434000 Sobic002G213400--Sobic010G100900 Sobic002G213400--Sobic004G268400 Sobic002G213400--Sobic007G124500 Sobic002G213400--Sobic003G304300 Sobic002G351200--Sobic010G100900 Sobic002G351200--Sobic001G018000 Sobic002G351200--Sobic003G304300 Sobic002G351200--Sobic004G268400 Sobic002G351200--Sobic004G267700 Sobic010G101000 Sobic010G101000 Sobic002G351200--Sobic010G101000 Sobic002G132400 Sobic002G132400 Sobic002G351200--Sobic002G132400 Sobic002G351200--Sobic003G186800 Sobic002G351200--Sobic002G213400 Sobic001G018000--Sobic004G268400 Sobic001G018000--Sobic002G351200 Sobic001G018000--Sobic007G016600 Sobic001G018000--Sobic010G101000 Sobic001G018000--Sobic004G267700 Sobic001G018000--Sobic001G411100 Sobic002G030900 Sobic002G030900 Sobic001G018000--Sobic002G030900 Sobic001G018000--Sobic003G304300 Sobic001G018000--Sobic003G186800 Sobic001G411100--Sobic007G124500 Sobic001G411100--Sobic001G018000 Sobic001G411100--Sobic002G030900 Sobic001G104700 Sobic001G104700 Sobic001G411100--Sobic001G104700 Sobic001G411100--Sobic004G268400 Sobic001G411100--Sobic010G101000 Sobic003G103300 Sobic003G103300 Sobic001G411100--Sobic003G103300 Sobic001G411100--Sobic002G351200 Sobic001G411100--Sobic004G267700 Sobic002G072500 Sobic002G072500 Sobic007G124500--Sobic002G072500 Sobic007G124500--Sobic001G411100 Sobic007G166300 Sobic007G166300 Sobic007G124500--Sobic007G166300 Sobic001G509200 Sobic001G509200 Sobic007G124500--Sobic001G509200 Sobic007G124500--Sobic010G100900 Sobic007G124500--Sobic002G351200 Sobic004G103300 Sobic004G103300 Sobic007G124500--Sobic004G103300 Sobic010G231500 Sobic010G231500 Sobic007G124500--Sobic010G231500 Sobic001G393300 Sobic001G393300 Sobic007G124500--Sobic001G393300 Sobic004G268400--Sobic004G267700 Sobic004G268400--Sobic007G016600 Sobic004G268400--Sobic001G018000 Sobic004G268400--Sobic002G351200 Sobic004G268400--Sobic003G304300 Sobic004G268400--Sobic003G186800 Sobic004G268400--Sobic010G100900 Sobic004G268400--Sobic010G101000 Sobic004G268400--Sobic003G380200 Sobic010G100900--Sobic002G351200 Sobic010G100900--Sobic003G380200 Sobic010G100900--Sobic002G132400 Sobic010G100900--Sobic004G268400 Sobic010G100900--Sobic003G304300 Sobic010G100900--Sobic004G267700 Sobic004G271600 Sobic004G271600 Sobic010G100900--Sobic004G271600 Sobic010G100900--Sobic002G356900 Sobic004G128900 Sobic004G128900 Sobic010G100900--Sobic004G128900 Sobic002G356900--Sobic010G100900 Sobic007G087100 Sobic007G087100 Sobic002G356900--Sobic007G087100 Sobic004G300100 Sobic004G300100 Sobic002G356900--Sobic004G300100 Sobic002G356900--Sobic003G380200 Sobic009G170200 Sobic009G170200 Sobic002G356900--Sobic009G170200 Sobic007G010800 Sobic007G010800 Sobic002G356900--Sobic007G010800 Sobic002G356900--Sobic004G268400 Sobic002G356900--Sobic010G231500 Sobic004G317700 Sobic004G317700 Sobic002G356900--Sobic004G317700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.