Gene annotation
Transcriptome id Sobic.010G223200.1
Synonym FTSH2, Sb10g026830, VAR2
Functional annotation OsFtsH2 FtsH protease, homologue of AtFtsH2/8, expressed
UniProt A0A194YKU6
Pfam PF07728 PF01434
Panther DB PTHR23076 PTHR23076:SF60
NCBI CDD -
KEGG Orthology K03798; ftsH, cell division protease FtsH
Gene Ontology GO:0016887; ATPase activity GO:0005524ATP binding GO:0006508proteolysis GO:0004222metalloendopeptidase activity


Orthologs (automatic annotation)
TAIR AT2G30950 : FtsH extracellular protease family
RAP-DB (Rice) LOC_Os06g45820.1 : OsFtsH2 FtsH protease, homologue of AtFtsH2/8, expressed
MaizeGDB (Corn) Zm00025a041947 , Zm00025a051769
Brachypodium KQK17068
Barley HORVU7Hr1G107740.4 , HORVU7Hr1G107740.1 , HORVU7Hr1G107740.3
Wheat TraesCS7B02G373000 , TraesCS7D02G458400 , TraesCS7A02G471000 , TraesCS7A02G471000
Populus PNT50933 , PNT50932 , PNT50931 , PNT50937 , PNT50936 , PNT51019 , PNT50934


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cDNA sequences
Sobic.010G223200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G060800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein ycf45, putative, expressed -
2 Sobic.002G291800 phosphate carrier protein, mitochondrial precursor, putative, expressed K15102: SLC25A3, PHC, solute carrier family 25 (mitochondrial phosphate transporter), member 3
3 Sobic.007G006200 NBS-LRR disease resistance protein, putative, expressed -
4 Sobic.002G351200 hydrolase, alpha/beta fold family domain containing protein, expressed -
5 Sobic.004G271600 region found in RelA/SpoT proteins containing protein, expressed -
6 Sobic.004G317700 tRNA synthetase class I, putative, expressed K01870: IARS, isoleucyl-tRNA synthetase
7 Sobic.002G275100 response regulator receiver domain containing protein, expressed K12130: pseudo-response regulator 5
8 Sobic.010G207100 methyltransferase domain containing protein, putative, expressed -
9 Sobic.002G132400 -(PubMedID : 26465154)@expressed protein -
10 Sobic.010G100900 alanyl-tRNA synthetase, putative, expressed K01872: AARS, alanyl-tRNA synthetase
11 Sobic.010G092350 - -
12 Sobic.004G190100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CPuORF19 - conserved peptide uORF-containing transcript, expressed -
13 Sobic.002G081400 ABC1 family domain containing protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
14 Sobic.001G112900 expressed protein -
15 Sobic.003G304300 expressed protein -
16 Sobic.007G016600 expressed protein -
17 Sobic.009G225600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed -
18 Sobic.006G235300 expressed protein -
19 Sobic.002G213400 expressed protein -
20 Sobic.003G380200 SNARE associated Golgi protein, putative, expressed -


Gene co-expression network
sample Sobic010G223200 Sobic010G223200 Sobic002G060800 Sobic002G060800 Sobic010G223200--Sobic002G060800 Sobic002G291800 Sobic002G291800 Sobic010G223200--Sobic002G291800 Sobic007G006200 Sobic007G006200 Sobic010G223200--Sobic007G006200 Sobic002G351200 Sobic002G351200 Sobic010G223200--Sobic002G351200 Sobic004G271600 Sobic004G271600 Sobic010G223200--Sobic004G271600 Sobic004G317700 Sobic004G317700 Sobic010G223200--Sobic004G317700 Sobic002G275100 Sobic002G275100 Sobic010G223200--Sobic002G275100 Sobic010G207100 Sobic010G207100 Sobic010G223200--Sobic010G207100 Sobic002G132400 Sobic002G132400 Sobic010G223200--Sobic002G132400 Sobic002G060800--Sobic002G351200 Sobic009G225600 Sobic009G225600 Sobic002G060800--Sobic009G225600 Sobic002G060800--Sobic010G223200 Sobic003G103300 Sobic003G103300 Sobic002G060800--Sobic003G103300 Sobic001G046000 Sobic001G046000 Sobic002G060800--Sobic001G046000 Sobic006G090100 Sobic006G090100 Sobic002G060800--Sobic006G090100 Sobic010G101000 Sobic010G101000 Sobic002G060800--Sobic010G101000 Sobic002G060800--Sobic004G317700 Sobic002G060800--Sobic004G271600 Sobic002G291800--Sobic010G223200 Sobic008G167600 Sobic008G167600 Sobic002G291800--Sobic008G167600 Sobic003G162400 Sobic003G162400 Sobic002G291800--Sobic003G162400 Sobic006G235300 Sobic006G235300 Sobic002G291800--Sobic006G235300 Sobic003G440300 Sobic003G440300 Sobic002G291800--Sobic003G440300 Sobic004G127800 Sobic004G127800 Sobic002G291800--Sobic004G127800 Sobic004G190100 Sobic004G190100 Sobic002G291800--Sobic004G190100 Sobic002G291800--Sobic002G275100 Sobic001G112900 Sobic001G112900 Sobic002G291800--Sobic001G112900 Sobic006G191500 Sobic006G191500 Sobic007G006200--Sobic006G191500 Sobic002G161400 Sobic002G161400 Sobic007G006200--Sobic002G161400 Sobic007G006200--Sobic004G127800 Sobic007G006200--Sobic010G223200 Sobic007G006200--Sobic006G235300 Sobic003G380200 Sobic003G380200 Sobic007G006200--Sobic003G380200 Sobic007G006200--Sobic006G090100 Sobic001G077300 Sobic001G077300 Sobic007G006200--Sobic001G077300 Sobic002G119100 Sobic002G119100 Sobic007G006200--Sobic002G119100 Sobic010G100900 Sobic010G100900 Sobic002G351200--Sobic010G100900 Sobic001G018000 Sobic001G018000 Sobic002G351200--Sobic001G018000 Sobic003G304300 Sobic003G304300 Sobic002G351200--Sobic003G304300 Sobic004G268400 Sobic004G268400 Sobic002G351200--Sobic004G268400 Sobic004G267700 Sobic004G267700 Sobic002G351200--Sobic004G267700 Sobic002G351200--Sobic010G101000 Sobic002G351200--Sobic002G132400 Sobic003G186800 Sobic003G186800 Sobic002G351200--Sobic003G186800 Sobic002G213400 Sobic002G213400 Sobic002G351200--Sobic002G213400 Sobic004G271600--Sobic002G132400 Sobic002G081400 Sobic002G081400 Sobic004G271600--Sobic002G081400 Sobic004G271600--Sobic010G100900 Sobic004G271600--Sobic002G351200 Sobic007G124500 Sobic007G124500 Sobic004G271600--Sobic007G124500 Sobic002G072500 Sobic002G072500 Sobic004G271600--Sobic002G072500 Sobic004G271600--Sobic006G090100 Sobic001G509200 Sobic001G509200 Sobic004G271600--Sobic001G509200 Sobic004G271600--Sobic002G060800 Sobic004G317700--Sobic002G081400 Sobic002G356900 Sobic002G356900 Sobic004G317700--Sobic002G356900 Sobic004G300100 Sobic004G300100 Sobic004G317700--Sobic004G300100 Sobic007G087100 Sobic007G087100 Sobic004G317700--Sobic007G087100 Sobic009G073900 Sobic009G073900 Sobic004G317700--Sobic009G073900 Sobic003G003450 Sobic003G003450 Sobic004G317700--Sobic003G003450 Sobic004G317700--Sobic002G060800 Sobic002G072400 Sobic002G072400 Sobic004G317700--Sobic002G072400 Sobic004G317700--Sobic007G124500 Sobic009G259100 Sobic009G259100 Sobic002G275100--Sobic009G259100 Sobic002G275100--Sobic003G380200 Sobic002G275100--Sobic004G127800 Sobic002G275100--Sobic010G100900 Sobic002G275100--Sobic010G223200 Sobic002G275100--Sobic002G132400 Sobic002G275100--Sobic004G271600 Sobic002G275100--Sobic007G006200 Sobic002G275100--Sobic006G191500 Sobic007G016600 Sobic007G016600 Sobic010G207100--Sobic007G016600 Sobic010G207100--Sobic002G213400 Sobic010G207100--Sobic002G351200 Sobic010G207100--Sobic001G018000 Sobic001G411100 Sobic001G411100 Sobic010G207100--Sobic001G411100 Sobic010G207100--Sobic007G124500 Sobic010G207100--Sobic004G268400 Sobic010G207100--Sobic010G100900 Sobic010G207100--Sobic002G356900 Sobic002G132400--Sobic004G271600 Sobic002G132400--Sobic010G100900 Sobic002G132400--Sobic002G351200 Sobic002G132400--Sobic001G509200 Sobic007G135800 Sobic007G135800 Sobic002G132400--Sobic007G135800 Sobic002G132400--Sobic003G380200 Sobic002G132400--Sobic007G124500 Sobic002G132400--Sobic004G268400 Sobic002G408000 Sobic002G408000 Sobic002G132400--Sobic002G408000
Octagon: transcription factors


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