Gene annotation
Transcriptome id Sobic.007G006200.1
Synonym
Functional annotation NBS-LRR disease resistance protein, putative, expressed
UniProt A0A1B6PER2
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF605
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G46530 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os12g13550.1 : NBS-LRR disease resistance protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G191500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed -
2 Sobic.002G161400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed -
3 Sobic.004G127800 AGC_PKA/PKG_like.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
4 Sobic.010G223200 OsFtsH2 FtsH protease, homologue of AtFtsH2/8, expressed K03798: ftsH, cell division protease FtsH
5 Sobic.006G235300 expressed protein -
6 Sobic.003G380200 SNARE associated Golgi protein, putative, expressed -
7 Sobic.006G090100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K09919: uncharacterized protein
8 Sobic.001G077300 thioredoxin, putative, expressed -
9 Sobic.002G119100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@integral membrane transporter family protein, putative, expressed -
10 Sobic.004G128900 GTP-binding protein typA/bipA, putative, expressed K06207: typA, GTP-binding protein
11 Sobic.002G060800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein ycf45, putative, expressed -
12 Sobic.006G235400 ELMO/CED-12 family protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
13 Sobic.004G338000 PPCK(PubMedID : 19549309)@PEP carboxylase kinase(PubMedID : 20410319)@-(PubMedID : 26976818)@phosphorylation of leaf PEPC during C4 photosynthesis.(PubMedID : 16925599)@calcium-dependent protein kinase isoform AK1, putative, expressed -
14 Sobic.006G259600 methylthioribose kinase, putative, expressed K00899: 5-methylthioribose kinase
15 Sobic.002G275100 response regulator receiver domain containing protein, expressed K12130: pseudo-response regulator 5
16 Sobic.007G087100 pentatricopeptide, putative, expressed -
17 Sobic.001G485100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.009G093100 OsAGSW1(Ortholog in rice:Li and Li 2015)(PubMedID : 31659923)@ ELMO/CED-12 family protein, putative, expressed -
19 Sobic.002G293500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sialin, putative, expressed -
20 Sobic.002G162400 potassium channel protein, putative, expressed K05389: potassium channel subfamily K, other eukaryote


Gene co-expression network
sample Sobic007G006200 Sobic007G006200 Sobic006G191500 Sobic006G191500 Sobic007G006200--Sobic006G191500 Sobic002G161400 Sobic002G161400 Sobic007G006200--Sobic002G161400 Sobic004G127800 Sobic004G127800 Sobic007G006200--Sobic004G127800 Sobic010G223200 Sobic010G223200 Sobic007G006200--Sobic010G223200 Sobic006G235300 Sobic006G235300 Sobic007G006200--Sobic006G235300 Sobic003G380200 Sobic003G380200 Sobic007G006200--Sobic003G380200 Sobic006G090100 Sobic006G090100 Sobic007G006200--Sobic006G090100 Sobic001G077300 Sobic001G077300 Sobic007G006200--Sobic001G077300 Sobic002G119100 Sobic002G119100 Sobic007G006200--Sobic002G119100 Sobic006G191500--Sobic002G161400 Sobic006G191500--Sobic003G380200 Sobic001G485100 Sobic001G485100 Sobic006G191500--Sobic001G485100 Sobic003G304300 Sobic003G304300 Sobic006G191500--Sobic003G304300 Sobic004G128900 Sobic004G128900 Sobic006G191500--Sobic004G128900 Sobic004G344600 Sobic004G344600 Sobic006G191500--Sobic004G344600 Sobic003G186800 Sobic003G186800 Sobic006G191500--Sobic003G186800 Sobic010G100900 Sobic010G100900 Sobic006G191500--Sobic010G100900 Sobic001G046000 Sobic001G046000 Sobic006G191500--Sobic001G046000 Sobic002G161400--Sobic006G191500 Sobic002G161400--Sobic004G344600 Sobic002G161400--Sobic004G128900 Sobic002G161400--Sobic003G304300 Sobic002G161400--Sobic001G485100 Sobic004G153900 Sobic004G153900 Sobic002G161400--Sobic004G153900 Sobic003G339200 Sobic003G339200 Sobic002G161400--Sobic003G339200 Sobic002G161400--Sobic003G380200 Sobic001G112900 Sobic001G112900 Sobic002G161400--Sobic001G112900 Sobic007G227100 Sobic007G227100 Sobic004G127800--Sobic007G227100 Sobic004G127800--Sobic001G077300 Sobic004G127800--Sobic006G235300 Sobic004G312600 Sobic004G312600 Sobic004G127800--Sobic004G312600 Sobic006G235400 Sobic006G235400 Sobic004G127800--Sobic006G235400 Sobic004G127800--Sobic006G090100 Sobic001G331600 Sobic001G331600 Sobic004G127800--Sobic001G331600 Sobic004G127800--Sobic006G191500 Sobic009G073900 Sobic009G073900 Sobic004G127800--Sobic009G073900 Sobic002G060800 Sobic002G060800 Sobic010G223200--Sobic002G060800 Sobic002G291800 Sobic002G291800 Sobic010G223200--Sobic002G291800 Sobic010G223200--Sobic007G006200 Sobic002G351200 Sobic002G351200 Sobic010G223200--Sobic002G351200 Sobic004G271600 Sobic004G271600 Sobic010G223200--Sobic004G271600 Sobic004G317700 Sobic004G317700 Sobic010G223200--Sobic004G317700 Sobic002G275100 Sobic002G275100 Sobic010G223200--Sobic002G275100 Sobic010G207100 Sobic010G207100 Sobic010G223200--Sobic010G207100 Sobic002G132400 Sobic002G132400 Sobic010G223200--Sobic002G132400 Sobic006G235300--Sobic004G127800 Sobic006G235300--Sobic006G235400 Sobic006G235300--Sobic002G161400 Sobic006G235300--Sobic001G077300 Sobic006G235300--Sobic006G191500 Sobic006G235300--Sobic004G128900 Sobic009G194500 Sobic009G194500 Sobic006G235300--Sobic009G194500 Sobic006G235300--Sobic003G380200 Sobic006G235300--Sobic007G227100 Sobic003G380200--Sobic006G191500 Sobic003G380200--Sobic003G186800 Sobic003G380200--Sobic010G100900 Sobic003G380200--Sobic003G304300 Sobic004G267700 Sobic004G267700 Sobic003G380200--Sobic004G267700 Sobic003G380200--Sobic001G485100 Sobic007G087100 Sobic007G087100 Sobic003G380200--Sobic007G087100 Sobic003G380200--Sobic002G161400 Sobic004G268400 Sobic004G268400 Sobic003G380200--Sobic004G268400 Sobic001G207800 Sobic001G207800 Sobic006G090100--Sobic001G207800 Sobic001G283100 Sobic001G283100 Sobic006G090100--Sobic001G283100 Sobic006G090100--Sobic001G077300 Sobic001G509200 Sobic001G509200 Sobic006G090100--Sobic001G509200 Sobic006G090100--Sobic009G073900 Sobic002G382700 Sobic002G382700 Sobic006G090100--Sobic002G382700 Sobic003G341300 Sobic003G341300 Sobic006G090100--Sobic003G341300 Sobic006G090100--Sobic001G046000 Sobic002G081400 Sobic002G081400 Sobic006G090100--Sobic002G081400 Sobic001G077300--Sobic009G073900 Sobic001G077300--Sobic006G090100 Sobic001G077300--Sobic006G235400 Sobic001G077300--Sobic004G127800 Sobic001G359300 Sobic001G359300 Sobic001G077300--Sobic001G359300 Sobic009G093100 Sobic009G093100 Sobic001G077300--Sobic009G093100 Sobic001G077300--Sobic003G341300 Sobic006G212800 Sobic006G212800 Sobic001G077300--Sobic006G212800 Sobic003G003450 Sobic003G003450 Sobic001G077300--Sobic003G003450 Sobic002G119100--Sobic009G194500 Sobic004G322600 Sobic004G322600 Sobic002G119100--Sobic004G322600 Sobic006G161500 Sobic006G161500 Sobic002G119100--Sobic006G161500 Sobic008G038500 Sobic008G038500 Sobic002G119100--Sobic008G038500 Sobic002G119100--Sobic004G127800 Sobic001G244600 Sobic001G244600 Sobic002G119100--Sobic001G244600 Sobic004G322700 Sobic004G322700 Sobic002G119100--Sobic004G322700 Sobic002G119100--Sobic007G227100 Sobic002G293500 Sobic002G293500 Sobic002G119100--Sobic002G293500
Octagon: transcription factors


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