Gene annotation
Transcriptome id Sobic.004G127800.1
Synonym Sb04g011020
Functional annotation AGC_PKA/PKG_like.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed
UniProt C5Y043
Pfam PF07714 PF00027 PF00481
Panther DB PTHR24353 PTHR24353:SF80
NCBI CDD KOG0614; cGMP-dependent protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT2G20050 : protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases
RAP-DB (Rice) LOC_Os02g17970.2 : AGC_PKA/PKG_like.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed
MaizeGDB (Corn) Zm00025a034356
Brachypodium KQJ94406
Barley HORVU6Hr1G040540.19 , HORVU6Hr1G040540.18 , HORVU6Hr1G040540.15 , HORVU6Hr1G040540.14 , HORVU6Hr1G040540.17 , HORVU6Hr1G040540.16 , HORVU6Hr1G040540.32 , HORVU6Hr1G040540.31 , HORVU6Hr1G040540.30 , HORVU6Hr1G040540.10 , HORVU6Hr1G040540.13 , HORVU6Hr1G040540.9 , HORVU6Hr1G040540.8 , HORVU6Hr1G040540.5 , HORVU6Hr1G040540.4 , HORVU6Hr1G040540.7 , HORVU6Hr1G040540.6 , HORVU6Hr1G040540.1 , HORVU6Hr1G040540.3 , HORVU6Hr1G040540.2 , HORVU6Hr1G040540.24 , HORVU6Hr1G040540.25 , HORVU6Hr1G040540.26 , HORVU6Hr1G040540.27 , HORVU6Hr1G040540.20 , HORVU6Hr1G040540.21 , HORVU6Hr1G040540.22 , HORVU6Hr1G040540.23 , HORVU6Hr1G040540.28 , HORVU6Hr1G040540.29
Wheat TraesCS6D02G174700 , TraesCS6A02G191000 , TraesCS6A02G191000 , TraesCS6A02G191000 , TraesCS6A02G191000 , TraesCS6A02G191000 , TraesCS6A02G191000 , TraesCS6B02G231400
Populus PNS93384 , PNS93385 , PNS93386 , PNS93387


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cDNA sequences
Sobic.004G127800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G227100 expressed protein -
2 Sobic.001G077300 thioredoxin, putative, expressed -
3 Sobic.006G235300 expressed protein -
4 Sobic.004G312600 COP1, putative, expressed K10143: RFWD2, E3 ubiquitin-protein ligase RFWD2
5 Sobic.006G235400 ELMO/CED-12 family protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
6 Sobic.006G090100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K09919: uncharacterized protein
7 Sobic.001G331600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATP-dependent protease, putative, expressed -
8 Sobic.006G191500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed -
9 Sobic.009G073900 thioredoxin, putative, expressed -
10 Sobic.009G194500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.009G093100 OsAGSW1(Ortholog in rice:Li and Li 2015)(PubMedID : 31659923)@ ELMO/CED-12 family protein, putative, expressed -
12 Sobic.006G065100 ERD1 protein, chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
13 Sobic.003G003450 - K01177: beta-amylase
14 Sobic.004G128900 GTP-binding protein typA/bipA, putative, expressed K06207: typA, GTP-binding protein
15 Sobic.003G380200 SNARE associated Golgi protein, putative, expressed -
16 Sobic.002G161400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed -
17 Sobic.003G073800 phosphatidate cytidylyltransferase, putative, expressed K00981: E2.7.7.41, CDS1, CDS2, phosphatidate cytidylyltransferase
18 Sobic.002G119100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@integral membrane transporter family protein, putative, expressed -
19 Sobic.001G359300 cytochrome P450, putative, expressed -
20 Sobic.002G293500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sialin, putative, expressed -


Gene co-expression network
sample Sobic004G127800 Sobic004G127800 Sobic007G227100 Sobic007G227100 Sobic004G127800--Sobic007G227100 Sobic001G077300 Sobic001G077300 Sobic004G127800--Sobic001G077300 Sobic006G235300 Sobic006G235300 Sobic004G127800--Sobic006G235300 Sobic004G312600 Sobic004G312600 Sobic004G127800--Sobic004G312600 Sobic006G235400 Sobic006G235400 Sobic004G127800--Sobic006G235400 Sobic006G090100 Sobic006G090100 Sobic004G127800--Sobic006G090100 Sobic001G331600 Sobic001G331600 Sobic004G127800--Sobic001G331600 Sobic006G191500 Sobic006G191500 Sobic004G127800--Sobic006G191500 Sobic009G073900 Sobic009G073900 Sobic004G127800--Sobic009G073900 Sobic007G227100--Sobic004G312600 Sobic007G227100--Sobic004G127800 Sobic007G227100--Sobic001G077300 Sobic007G227100--Sobic001G331600 Sobic008G038500 Sobic008G038500 Sobic007G227100--Sobic008G038500 Sobic002G382700 Sobic002G382700 Sobic007G227100--Sobic002G382700 Sobic007G227100--Sobic006G235400 Sobic003G341300 Sobic003G341300 Sobic007G227100--Sobic003G341300 Sobic001G485100 Sobic001G485100 Sobic007G227100--Sobic001G485100 Sobic001G077300--Sobic009G073900 Sobic001G077300--Sobic006G090100 Sobic001G077300--Sobic006G235400 Sobic001G077300--Sobic004G127800 Sobic001G359300 Sobic001G359300 Sobic001G077300--Sobic001G359300 Sobic009G093100 Sobic009G093100 Sobic001G077300--Sobic009G093100 Sobic001G077300--Sobic003G341300 Sobic006G212800 Sobic006G212800 Sobic001G077300--Sobic006G212800 Sobic003G003450 Sobic003G003450 Sobic001G077300--Sobic003G003450 Sobic006G235300--Sobic004G127800 Sobic006G235300--Sobic006G235400 Sobic002G161400 Sobic002G161400 Sobic006G235300--Sobic002G161400 Sobic006G235300--Sobic001G077300 Sobic006G235300--Sobic006G191500 Sobic004G128900 Sobic004G128900 Sobic006G235300--Sobic004G128900 Sobic009G194500 Sobic009G194500 Sobic006G235300--Sobic009G194500 Sobic003G380200 Sobic003G380200 Sobic006G235300--Sobic003G380200 Sobic006G235300--Sobic007G227100 Sobic004G312600--Sobic007G227100 Sobic004G312600--Sobic004G127800 Sobic004G312600--Sobic008G038500 Sobic004G312600--Sobic001G331600 Sobic004G312600--Sobic002G382700 Sobic002G293500 Sobic002G293500 Sobic004G312600--Sobic002G293500 Sobic004G312600--Sobic001G077300 Sobic005G106600 Sobic005G106600 Sobic004G312600--Sobic005G106600 Sobic003G220100 Sobic003G220100 Sobic004G312600--Sobic003G220100 Sobic010G231300 Sobic010G231300 Sobic006G235400--Sobic010G231300 Sobic006G235400--Sobic001G077300 Sobic006G235400--Sobic004G128900 Sobic006G235400--Sobic003G341300 Sobic003G409700 Sobic003G409700 Sobic006G235400--Sobic003G409700 Sobic008G129900 Sobic008G129900 Sobic006G235400--Sobic008G129900 Sobic006G161500 Sobic006G161500 Sobic006G235400--Sobic006G161500 Sobic006G235400--Sobic003G380200 Sobic001G180200 Sobic001G180200 Sobic006G235400--Sobic001G180200 Sobic001G207800 Sobic001G207800 Sobic006G090100--Sobic001G207800 Sobic001G283100 Sobic001G283100 Sobic006G090100--Sobic001G283100 Sobic006G090100--Sobic001G077300 Sobic001G509200 Sobic001G509200 Sobic006G090100--Sobic001G509200 Sobic006G090100--Sobic009G073900 Sobic006G090100--Sobic002G382700 Sobic006G090100--Sobic003G341300 Sobic001G046000 Sobic001G046000 Sobic006G090100--Sobic001G046000 Sobic002G081400 Sobic002G081400 Sobic006G090100--Sobic002G081400 Sobic001G331600--Sobic001G485100 Sobic001G331600--Sobic004G128900 Sobic004G153900 Sobic004G153900 Sobic001G331600--Sobic004G153900 Sobic001G331600--Sobic002G161400 Sobic001G331600--Sobic001G046000 Sobic001G331600--Sobic004G312600 Sobic001G331600--Sobic007G227100 Sobic001G331600--Sobic006G191500 Sobic004G344600 Sobic004G344600 Sobic001G331600--Sobic004G344600 Sobic006G191500--Sobic002G161400 Sobic006G191500--Sobic003G380200 Sobic006G191500--Sobic001G485100 Sobic003G304300 Sobic003G304300 Sobic006G191500--Sobic003G304300 Sobic006G191500--Sobic004G128900 Sobic006G191500--Sobic004G344600 Sobic003G186800 Sobic003G186800 Sobic006G191500--Sobic003G186800 Sobic010G100900 Sobic010G100900 Sobic006G191500--Sobic010G100900 Sobic006G191500--Sobic001G046000 Sobic009G073900--Sobic001G077300 Sobic009G073900--Sobic003G003450 Sobic009G073900--Sobic006G090100 Sobic009G073900--Sobic001G509200 Sobic007G087100 Sobic007G087100 Sobic009G073900--Sobic007G087100 Sobic003G094100 Sobic003G094100 Sobic009G073900--Sobic003G094100 Sobic009G073900--Sobic002G081400 Sobic007G135800 Sobic007G135800 Sobic009G073900--Sobic007G135800 Sobic006G213700 Sobic006G213700 Sobic009G073900--Sobic006G213700
Octagon: transcription factors


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