Gene annotation
Transcriptome id Sobic.002G162400.3,Sobic.002G162400.4,Sobic.002G162400.1,Sobic.002G162400.2
Synonym KCO6, ATKCO6, ATTPK3, TPK3, Sb02g020740
Functional annotation potassium channel protein, putative, expressed
UniProt A0A1W0W4E1 , C5X901 , A0A1W0W4F4
Pfam PF07885
Panther DB PTHR11003 PTHR11003:SF126
NCBI CDD KOG1418; Tandem pore domain K+ channel
KEGG Orthology K05389; potassium channel subfamily K, other eukaryote
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G18160 : Ca2+ activated outward rectifying K+ channel 6
RAP-DB (Rice) LOC_Os09g12790.1 : potassium channel protein, putative, expressed
MaizeGDB (Corn) Zm00025a013693 , Zm00025a046374
Brachypodium KQJ89774
Barley HORVU5Hr1G054420.4 , HORVU5Hr1G054420.2 , HORVU5Hr1G054420.3 , HORVU1Hr1G054490.1 , HORVU1Hr1G054490.2 , HORVU6Hr1G071830.2 , HORVU7Hr1G106690.1 , HORVU3Hr1G059310.3 , HORVU3Hr1G059310.2 , HORVU3Hr1G059310.1 , HORVU3Hr1G059410.1 , HORVU5Hr1G054400.2 , HORVU5Hr1G054400.3 , HORVU5Hr1G054400.1 , HORVU5Hr1G054400.4 , HORVU5Hr1G054400.5 , HORVU6Hr1G071830.1 , HORVU2Hr1G087140.1 , HORVU2Hr1G087140.2 , HORVU2Hr1G087140.3 , HORVU2Hr1G087140.4 , HORVU1Hr1G054510.1
Wheat TraesCS5B02G176500 , TraesCS5B02G176500 , TraesCS5A02G178800 , TraesCS5D02G183300 , TraesCS5D02G183300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G341300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.001G263100 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
3 Sobic.001G180200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxisomal membrane protein, putative, expressed K13348: protein Mpv17
4 Sobic.002G206300 tsi1-interacting protein TSIP1, putative, expressed -
5 Sobic.010G231300 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
6 Sobic.006G235400 ELMO/CED-12 family protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
7 Sobic.001G077300 thioredoxin, putative, expressed -
8 Sobic.001G258200 Ser/Thr protein phosphatase family protein, putative, expressed -
9 Sobic.008G129900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.002G382700 heat shock protein DnaJ, putative, expressed -
11 Sobic.007G140700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aldehyde dehydrogenase, putative, expressed K00131: glyceraldehyde-3-phosphate dehydrogenase (NADP+)
12 Sobic.003G409700 rieske domain containing protein, expressed -
13 Sobic.007G135800 ATP-dependent Clp protease adaptor protein ClpS containing protein, expressed K06891: ATP-dependent Clp protease adaptor protein ClpS
14 Sobic.001G217900 PPR repeat domain containing protein, putative, expressed -
15 Sobic.003G228300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450 72A1, putative, expressed -
16 Sobic.006G212800 expressed protein -
17 Sobic.006G161500 elongation factor, putative, expressed K02355: fusA, GFM, elongation factor G
18 Sobic.009G194500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.006G090100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K09919: uncharacterized protein
20 Sobic.009G038701 - -


Gene co-expression network
sample Sobic002G162400 Sobic002G162400 Sobic003G341300 Sobic003G341300 Sobic002G162400--Sobic003G341300 Sobic001G263100 Sobic001G263100 Sobic002G162400--Sobic001G263100 Sobic001G180200 Sobic001G180200 Sobic002G162400--Sobic001G180200 Sobic002G206300 Sobic002G206300 Sobic002G162400--Sobic002G206300 Sobic010G231300 Sobic010G231300 Sobic002G162400--Sobic010G231300 Sobic006G235400 Sobic006G235400 Sobic002G162400--Sobic006G235400 Sobic001G077300 Sobic001G077300 Sobic002G162400--Sobic001G077300 Sobic001G258200 Sobic001G258200 Sobic002G162400--Sobic001G258200 Sobic008G129900 Sobic008G129900 Sobic002G162400--Sobic008G129900 Sobic003G341300--Sobic001G180200 Sobic007G157300 Sobic007G157300 Sobic003G341300--Sobic007G157300 Sobic001G283100 Sobic001G283100 Sobic003G341300--Sobic001G283100 Sobic003G409700 Sobic003G409700 Sobic003G341300--Sobic003G409700 Sobic003G341300--Sobic006G235400 Sobic003G341300--Sobic002G162400 Sobic003G341300--Sobic001G077300 Sobic006G090100 Sobic006G090100 Sobic003G341300--Sobic006G090100 Sobic003G094100 Sobic003G094100 Sobic003G341300--Sobic003G094100 Sobic007G058100 Sobic007G058100 Sobic001G263100--Sobic007G058100 Sobic001G263100--Sobic010G231300 Sobic001G263100--Sobic008G129900 Sobic001G263100--Sobic002G162400 Sobic001G263100--Sobic001G180200 Sobic001G217900 Sobic001G217900 Sobic001G263100--Sobic001G217900 Sobic001G263100--Sobic003G341300 Sobic001G263100--Sobic002G206300 Sobic001G263100--Sobic006G235400 Sobic001G180200--Sobic003G341300 Sobic001G180200--Sobic002G206300 Sobic007G135800 Sobic007G135800 Sobic001G180200--Sobic007G135800 Sobic009G038701 Sobic009G038701 Sobic001G180200--Sobic009G038701 Sobic009G207900 Sobic009G207900 Sobic001G180200--Sobic009G207900 Sobic001G180200--Sobic003G094100 Sobic001G504400 Sobic001G504400 Sobic001G180200--Sobic001G504400 Sobic001G180200--Sobic001G263100 Sobic001G180200--Sobic002G162400 Sobic002G206300--Sobic009G038701 Sobic002G206300--Sobic001G504400 Sobic002G206300--Sobic001G180200 Sobic001G536700 Sobic001G536700 Sobic002G206300--Sobic001G536700 Sobic002G206300--Sobic009G207900 Sobic002G206300--Sobic001G258200 Sobic002G206300--Sobic008G129900 Sobic002G206300--Sobic001G217900 Sobic002G206300--Sobic003G341300 Sobic010G231300--Sobic008G129900 Sobic010G231300--Sobic006G235400 Sobic010G231300--Sobic001G217900 Sobic010G231300--Sobic001G263100 Sobic006G161500 Sobic006G161500 Sobic010G231300--Sobic006G161500 Sobic007G133000 Sobic007G133000 Sobic010G231300--Sobic007G133000 Sobic010G231300--Sobic003G341300 Sobic010G231300--Sobic001G180200 Sobic010G231300--Sobic002G162400 Sobic006G235400--Sobic010G231300 Sobic006G235400--Sobic001G077300 Sobic004G128900 Sobic004G128900 Sobic006G235400--Sobic004G128900 Sobic006G235400--Sobic003G341300 Sobic006G235400--Sobic003G409700 Sobic006G235400--Sobic008G129900 Sobic006G235400--Sobic006G161500 Sobic003G380200 Sobic003G380200 Sobic006G235400--Sobic003G380200 Sobic006G235400--Sobic001G180200 Sobic009G073900 Sobic009G073900 Sobic001G077300--Sobic009G073900 Sobic001G077300--Sobic006G090100 Sobic001G077300--Sobic006G235400 Sobic004G127800 Sobic004G127800 Sobic001G077300--Sobic004G127800 Sobic001G359300 Sobic001G359300 Sobic001G077300--Sobic001G359300 Sobic009G093100 Sobic009G093100 Sobic001G077300--Sobic009G093100 Sobic001G077300--Sobic003G341300 Sobic006G212800 Sobic006G212800 Sobic001G077300--Sobic006G212800 Sobic003G003450 Sobic003G003450 Sobic001G077300--Sobic003G003450 Sobic003G185900 Sobic003G185900 Sobic001G258200--Sobic003G185900 Sobic002G382700 Sobic002G382700 Sobic001G258200--Sobic002G382700 Sobic001G258200--Sobic008G129900 Sobic001G258200--Sobic001G504400 Sobic004G189800 Sobic004G189800 Sobic001G258200--Sobic004G189800 Sobic008G033000 Sobic008G033000 Sobic001G258200--Sobic008G033000 Sobic001G258200--Sobic002G206300 Sobic001G258200--Sobic001G359300 Sobic005G068700 Sobic005G068700 Sobic001G258200--Sobic005G068700 Sobic008G129900--Sobic010G231300 Sobic008G129900--Sobic008G033000 Sobic008G129900--Sobic001G258200 Sobic008G129900--Sobic001G217900 Sobic008G129900--Sobic006G235400 Sobic003G097600 Sobic003G097600 Sobic008G129900--Sobic003G097600 Sobic008G129900--Sobic001G263100 Sobic008G129900--Sobic002G206300 Sobic008G129900--Sobic003G341300
Octagon: transcription factors


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