Gene annotation
Transcriptome id Sobic.006G212800.1,Sobic.006G212800.2
Synonym Sb06g028310
Functional annotation expressed protein
UniProt A0A1B6PN50 , A0A1Z5REZ7
Pfam PF10184
Panther DB PTHR22750 PTHR22750:SF43
NCBI CDD KOG4457; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G16320 : Uncharacterized conserved protein (DUF2358)
RAP-DB (Rice) LOC_Os04g52330.1 : expressed protein
MaizeGDB (Corn) Zm00025a057011 , Zm00025a009816
Brachypodium PNT61840 , KQJ84553 , KQJ84554
Barley -
Wheat TraesCS2D02G421500 , TraesCS2A02G423700
Populus -


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cDNA sequences
Sobic.006G212800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G207900 expressed protein -
2 Sobic.001G077300 thioredoxin, putative, expressed -
3 Sobic.001G180200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxisomal membrane protein, putative, expressed K13348: protein Mpv17
4 Sobic.007G135800 ATP-dependent Clp protease adaptor protein ClpS containing protein, expressed K06891: ATP-dependent Clp protease adaptor protein ClpS
5 Sobic.002G206300 tsi1-interacting protein TSIP1, putative, expressed -
6 Sobic.009G073900 thioredoxin, putative, expressed -
7 Sobic.002G132400 -(PubMedID : 26465154)@expressed protein -
8 Sobic.005G179300 ABC transporter, ATP-binding protein, putative, expressed -
9 Sobic.002G162400 potassium channel protein, putative, expressed K05389: potassium channel subfamily K, other eukaryote
10 Sobic.001G509200 "similar to 9,10-9',10' carotenoid cleavage dioxygenase 1"(PubMedID : 29862293)@carotenoid cleavage dioxygenase, putative, expressed K11159: carotenoid cleavage oxygenase
11 Sobic.003G094100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.007G087100 pentatricopeptide, putative, expressed -
13 Sobic.001G359300 cytochrome P450, putative, expressed -
14 Sobic.003G073800 phosphatidate cytidylyltransferase, putative, expressed K00981: E2.7.7.41, CDS1, CDS2, phosphatidate cytidylyltransferase
15 Sobic.009G170200 translation initiation factor IF-2, chloroplast precursor, putative, expressed K02519: infB, translation initiation factor IF-2
16 Sobic.002G225100 bZIP transcription factor, putative, expressed K14432: ABA responsive element binding factor
17 Sobic.001G540600 expressed protein -
18 Sobic.006G259600 methylthioribose kinase, putative, expressed K00899: 5-methylthioribose kinase
19 Sobic.006G235400 ELMO/CED-12 family protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
20 Sobic.006G213700 oxidoreductase, short chain dehydrogenase/reductase family protein, putative, expressed K13237: peroxisomal 2,4-dienoyl-CoA reductase


Gene co-expression network
sample Sobic006G212800 Sobic006G212800 Sobic009G207900 Sobic009G207900 Sobic006G212800--Sobic009G207900 Sobic001G077300 Sobic001G077300 Sobic006G212800--Sobic001G077300 Sobic001G180200 Sobic001G180200 Sobic006G212800--Sobic001G180200 Sobic007G135800 Sobic007G135800 Sobic006G212800--Sobic007G135800 Sobic002G206300 Sobic002G206300 Sobic006G212800--Sobic002G206300 Sobic009G073900 Sobic009G073900 Sobic006G212800--Sobic009G073900 Sobic002G132400 Sobic002G132400 Sobic006G212800--Sobic002G132400 Sobic005G179300 Sobic005G179300 Sobic006G212800--Sobic005G179300 Sobic002G162400 Sobic002G162400 Sobic006G212800--Sobic002G162400 Sobic009G207900--Sobic006G212800 Sobic009G207900--Sobic001G180200 Sobic009G207900--Sobic002G206300 Sobic001G504400 Sobic001G504400 Sobic009G207900--Sobic001G504400 Sobic009G219100 Sobic009G219100 Sobic009G207900--Sobic009G219100 Sobic009G207900--Sobic007G135800 Sobic009G038701 Sobic009G038701 Sobic009G207900--Sobic009G038701 Sobic003G073800 Sobic003G073800 Sobic009G207900--Sobic003G073800 Sobic009G062400 Sobic009G062400 Sobic009G207900--Sobic009G062400 Sobic001G077300--Sobic009G073900 Sobic006G090100 Sobic006G090100 Sobic001G077300--Sobic006G090100 Sobic006G235400 Sobic006G235400 Sobic001G077300--Sobic006G235400 Sobic004G127800 Sobic004G127800 Sobic001G077300--Sobic004G127800 Sobic001G359300 Sobic001G359300 Sobic001G077300--Sobic001G359300 Sobic009G093100 Sobic009G093100 Sobic001G077300--Sobic009G093100 Sobic003G341300 Sobic003G341300 Sobic001G077300--Sobic003G341300 Sobic001G077300--Sobic006G212800 Sobic003G003450 Sobic003G003450 Sobic001G077300--Sobic003G003450 Sobic001G180200--Sobic003G341300 Sobic001G180200--Sobic002G206300 Sobic001G180200--Sobic007G135800 Sobic001G180200--Sobic009G038701 Sobic001G180200--Sobic009G207900 Sobic003G094100 Sobic003G094100 Sobic001G180200--Sobic003G094100 Sobic001G180200--Sobic001G504400 Sobic001G263100 Sobic001G263100 Sobic001G180200--Sobic001G263100 Sobic001G180200--Sobic002G162400 Sobic001G509200 Sobic001G509200 Sobic007G135800--Sobic001G509200 Sobic007G135800--Sobic003G094100 Sobic001G393300 Sobic001G393300 Sobic007G135800--Sobic001G393300 Sobic007G135800--Sobic001G180200 Sobic004G103300 Sobic004G103300 Sobic007G135800--Sobic004G103300 Sobic006G213700 Sobic006G213700 Sobic007G135800--Sobic006G213700 Sobic007G166300 Sobic007G166300 Sobic007G135800--Sobic007G166300 Sobic003G409700 Sobic003G409700 Sobic007G135800--Sobic003G409700 Sobic007G135800--Sobic003G341300 Sobic002G206300--Sobic009G038701 Sobic002G206300--Sobic001G504400 Sobic002G206300--Sobic001G180200 Sobic001G536700 Sobic001G536700 Sobic002G206300--Sobic001G536700 Sobic002G206300--Sobic009G207900 Sobic001G258200 Sobic001G258200 Sobic002G206300--Sobic001G258200 Sobic008G129900 Sobic008G129900 Sobic002G206300--Sobic008G129900 Sobic001G217900 Sobic001G217900 Sobic002G206300--Sobic001G217900 Sobic002G206300--Sobic003G341300 Sobic009G073900--Sobic001G077300 Sobic009G073900--Sobic003G003450 Sobic009G073900--Sobic006G090100 Sobic009G073900--Sobic001G509200 Sobic007G087100 Sobic007G087100 Sobic009G073900--Sobic007G087100 Sobic009G073900--Sobic003G094100 Sobic002G081400 Sobic002G081400 Sobic009G073900--Sobic002G081400 Sobic009G073900--Sobic007G135800 Sobic009G073900--Sobic006G213700 Sobic004G271600 Sobic004G271600 Sobic002G132400--Sobic004G271600 Sobic010G100900 Sobic010G100900 Sobic002G132400--Sobic010G100900 Sobic002G351200 Sobic002G351200 Sobic002G132400--Sobic002G351200 Sobic002G132400--Sobic001G509200 Sobic002G132400--Sobic007G135800 Sobic003G380200 Sobic003G380200 Sobic002G132400--Sobic003G380200 Sobic007G124500 Sobic007G124500 Sobic002G132400--Sobic007G124500 Sobic004G268400 Sobic004G268400 Sobic002G132400--Sobic004G268400 Sobic002G408000 Sobic002G408000 Sobic002G132400--Sobic002G408000 Sobic005G179300--Sobic006G090100 Sobic005G179300--Sobic001G077300 Sobic005G179300--Sobic003G073800 Sobic005G179300--Sobic006G212800 Sobic005G179300--Sobic009G207900 Sobic001G207800 Sobic001G207800 Sobic005G179300--Sobic001G207800 Sobic005G179300--Sobic009G219100 Sobic005G179300--Sobic004G271600 Sobic005G179300--Sobic002G081400 Sobic002G162400--Sobic003G341300 Sobic002G162400--Sobic001G263100 Sobic002G162400--Sobic001G180200 Sobic002G162400--Sobic002G206300 Sobic010G231300 Sobic010G231300 Sobic002G162400--Sobic010G231300 Sobic002G162400--Sobic006G235400 Sobic002G162400--Sobic001G077300 Sobic002G162400--Sobic001G258200 Sobic002G162400--Sobic008G129900
Octagon: transcription factors


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