Gene annotation
Transcriptome id Sobic.009G170200.1
Synonym FUG1, Sb09g023130
Functional annotation translation initiation factor IF-2, chloroplast precursor, putative, expressed
UniProt A0A1B6P940 , C6JSQ1
Pfam PF01926 PF11987
Panther DB PTHR23115 PTHR23115:SF138
NCBI CDD -
KEGG Orthology K02519; infB, translation initiation factor IF-2
Gene Ontology GO:0005525; GTP binding


Orthologs (automatic annotation)
TAIR AT1G17220 : Translation initiation factor 2, small GTP-binding protein
RAP-DB (Rice) LOC_Os05g49970.1 : translation initiation factor IF-2, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a043485 , Zm00025a043486 , Zm00025a021499
Brachypodium KQJ96029
Barley HORVU7Hr1G060530.13 , HORVU7Hr1G060530.12 , HORVU7Hr1G060530.11 , HORVU7Hr1G060530.10 , HORVU7Hr1G060530.16 , HORVU7Hr1G060530.15 , HORVU7Hr1G060530.14 , HORVU7Hr1G060530.9 , HORVU7Hr1G060530.8 , HORVU7Hr1G060530.3 , HORVU7Hr1G060530.2 , HORVU7Hr1G060530.1 , HORVU7Hr1G060530.7 , HORVU7Hr1G060530.6 , HORVU7Hr1G060530.5 , HORVU7Hr1G060530.4
Wheat TraesCS7A02G287900 , TraesCS7A02G287900 , TraesCS7B02G183700 , TraesCS7B02G183700 , TraesCS7D02G288700 , TraesCS7D02G288700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G070900 inner membrane protein, putative, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
2 Sobic.006G232600 amine oxidase, flavin-containing, domain containing protein, expressed K02293: PDS, 15-cis-phytoene desaturase
3 Sobic.007G087100 pentatricopeptide, putative, expressed -
4 Sobic.004G103300 Complex I intermediate-associated protein 30 domain containing protein, putative, expressed -
5 Sobic.002G133900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
6 Sobic.001G077300 thioredoxin, putative, expressed -
7 Sobic.004G353100 -(PubMedID : 26976818)@phosphate/phosphate translocator, putative, expressed K15283: solute carrier family 35, member E1
8 Sobic.001G378100 relA-SpoT like protein RSH1, putative, expressed -
9 Sobic.007G103400 expressed protein -
10 Sobic.007G135800 ATP-dependent Clp protease adaptor protein ClpS containing protein, expressed K06891: ATP-dependent Clp protease adaptor protein ClpS
11 Sobic.001G536700 expressed protein -
12 Sobic.005G028800 astaxanthin synthase KC28, putative, expressed -
13 Sobic.002G356900 threonyl-tRNA synthetase, putative, expressed K01868: TARS, threonyl-tRNA synthetase
14 Sobic.002G298800 PAP fibrillin family domain containing protein, expressed -
15 Sobic.002G198300 zinc finger, C3HC4 type domain containing protein, expressed -
16 Sobic.002G081400 ABC1 family domain containing protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
17 Sobic.009G103000 ubiquitin family protein, putative, expressed -
18 Sobic.009G073900 thioredoxin, putative, expressed -
19 Sobic.001G540600 expressed protein -
20 Sobic.009G237000 OsDegp9 - Putative Deg protease homologue, expressed -


Gene co-expression network
sample Sobic009G170200 Sobic009G170200 Sobic003G070900 Sobic003G070900 Sobic009G170200--Sobic003G070900 Sobic006G232600 Sobic006G232600 Sobic009G170200--Sobic006G232600 Sobic007G087100 Sobic007G087100 Sobic009G170200--Sobic007G087100 Sobic004G103300 Sobic004G103300 Sobic009G170200--Sobic004G103300 Sobic002G133900 Sobic002G133900 Sobic009G170200--Sobic002G133900 Sobic001G077300 Sobic001G077300 Sobic009G170200--Sobic001G077300 Sobic004G353100 Sobic004G353100 Sobic009G170200--Sobic004G353100 Sobic001G378100 Sobic001G378100 Sobic009G170200--Sobic001G378100 Sobic007G103400 Sobic007G103400 Sobic009G170200--Sobic007G103400 Sobic003G070900--Sobic002G133900 Sobic003G287900 Sobic003G287900 Sobic003G070900--Sobic003G287900 Sobic003G070900--Sobic009G170200 Sobic003G094350 Sobic003G094350 Sobic003G070900--Sobic003G094350 Sobic001G118400 Sobic001G118400 Sobic003G070900--Sobic001G118400 Sobic001G500600 Sobic001G500600 Sobic003G070900--Sobic001G500600 Sobic003G070900--Sobic004G353100 Sobic008G074000 Sobic008G074000 Sobic003G070900--Sobic008G074000 Sobic008G006100 Sobic008G006100 Sobic003G070900--Sobic008G006100 Sobic006G232600--Sobic009G170200 Sobic006G232600--Sobic007G087100 Sobic003G003450 Sobic003G003450 Sobic006G232600--Sobic003G003450 Sobic006G232600--Sobic001G378100 Sobic009G073900 Sobic009G073900 Sobic006G232600--Sobic009G073900 Sobic006G233700 Sobic006G233700 Sobic006G232600--Sobic006G233700 Sobic009G103000 Sobic009G103000 Sobic006G232600--Sobic009G103000 Sobic006G232600--Sobic001G077300 Sobic002G081400 Sobic002G081400 Sobic006G232600--Sobic002G081400 Sobic003G380200 Sobic003G380200 Sobic007G087100--Sobic003G380200 Sobic007G087100--Sobic009G073900 Sobic007G087100--Sobic009G170200 Sobic007G087100--Sobic001G077300 Sobic002G356900 Sobic002G356900 Sobic007G087100--Sobic002G356900 Sobic007G087100--Sobic006G232600 Sobic007G087100--Sobic009G103000 Sobic007G087100--Sobic003G003450 Sobic007G135800 Sobic007G135800 Sobic007G087100--Sobic007G135800 Sobic001G509200 Sobic001G509200 Sobic004G103300--Sobic001G509200 Sobic007G166300 Sobic007G166300 Sobic004G103300--Sobic007G166300 Sobic001G393300 Sobic001G393300 Sobic004G103300--Sobic001G393300 Sobic001G368600 Sobic001G368600 Sobic004G103300--Sobic001G368600 Sobic002G298800 Sobic002G298800 Sobic004G103300--Sobic002G298800 Sobic007G108900 Sobic007G108900 Sobic004G103300--Sobic007G108900 Sobic006G097500 Sobic006G097500 Sobic004G103300--Sobic006G097500 Sobic005G028800 Sobic005G028800 Sobic004G103300--Sobic005G028800 Sobic004G103300--Sobic007G135800 Sobic002G133900--Sobic003G070900 Sobic002G133900--Sobic003G094350 Sobic002G133900--Sobic003G287900 Sobic002G405100 Sobic002G405100 Sobic002G133900--Sobic002G405100 Sobic002G133900--Sobic004G353100 Sobic005G100300 Sobic005G100300 Sobic002G133900--Sobic005G100300 Sobic002G028400 Sobic002G028400 Sobic002G133900--Sobic002G028400 Sobic002G133900--Sobic007G103400 Sobic002G133900--Sobic009G170200 Sobic001G077300--Sobic009G073900 Sobic006G090100 Sobic006G090100 Sobic001G077300--Sobic006G090100 Sobic006G235400 Sobic006G235400 Sobic001G077300--Sobic006G235400 Sobic004G127800 Sobic004G127800 Sobic001G077300--Sobic004G127800 Sobic001G359300 Sobic001G359300 Sobic001G077300--Sobic001G359300 Sobic009G093100 Sobic009G093100 Sobic001G077300--Sobic009G093100 Sobic003G341300 Sobic003G341300 Sobic001G077300--Sobic003G341300 Sobic006G212800 Sobic006G212800 Sobic001G077300--Sobic006G212800 Sobic001G077300--Sobic003G003450 Sobic004G353100--Sobic007G103400 Sobic009G237000 Sobic009G237000 Sobic004G353100--Sobic009G237000 Sobic004G353100--Sobic002G133900 Sobic004G353100--Sobic002G298800 Sobic010G035400 Sobic010G035400 Sobic004G353100--Sobic010G035400 Sobic004G353100--Sobic003G070900 Sobic003G233700 Sobic003G233700 Sobic004G353100--Sobic003G233700 Sobic009G132000 Sobic009G132000 Sobic004G353100--Sobic009G132000 Sobic004G353100--Sobic009G170200 Sobic003G073800 Sobic003G073800 Sobic001G378100--Sobic003G073800 Sobic001G217900 Sobic001G217900 Sobic001G378100--Sobic001G217900 Sobic001G504400 Sobic001G504400 Sobic001G378100--Sobic001G504400 Sobic001G378100--Sobic001G077300 Sobic001G540600 Sobic001G540600 Sobic001G378100--Sobic001G540600 Sobic001G536700 Sobic001G536700 Sobic001G378100--Sobic001G536700 Sobic001G378100--Sobic006G232600 Sobic001G378100--Sobic009G170200 Sobic001G258200 Sobic001G258200 Sobic001G378100--Sobic001G258200 Sobic007G103400--Sobic009G237000 Sobic007G103400--Sobic002G298800 Sobic007G103400--Sobic004G353100 Sobic007G103400--Sobic010G035400 Sobic007G103400--Sobic001G504400 Sobic003G306200 Sobic003G306200 Sobic007G103400--Sobic003G306200 Sobic002G198300 Sobic002G198300 Sobic007G103400--Sobic002G198300 Sobic007G103400--Sobic003G233700 Sobic002G275300 Sobic002G275300 Sobic007G103400--Sobic002G275300
Octagon: transcription factors


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