Gene annotation
Transcriptome id Sobic.003G070900.4,Sobic.003G070900.5,Sobic.003G070900.2,Sobic.003G070900.3,Sobic.003G070900.1
Synonym ALB3, Sb03g006010
Functional annotation inner membrane protein, putative, expressed
UniProt A0A1W0VW05 , A0A1W0VW00 , A0A1B6Q1Y4 , A0A1B6Q1T5
Pfam PF02096
Panther DB PTHR12428 PTHR12428:SF19
NCBI CDD KOG1239; Inner membrane protein translocase involved in respiratory chain assembly
KEGG Orthology K03217; yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT2G28800 : 63 kDa inner membrane family protein
RAP-DB (Rice) LOC_Os01g05800.1 : inner membrane protein, putative, expressed
MaizeGDB (Corn) Zm00025a023449 , Zm00025a035646
Brachypodium -
Barley HORVU3Hr1G013690.1 , HORVU3Hr1G013690.2 , HORVU3Hr1G013690.3 , HORVU3Hr1G013690.4 , HORVU3Hr1G013690.5 , HORVU3Hr1G013690.6 , HORVU3Hr1G013690.7
Wheat TraesCS3B02G089800 , TraesCS3D02G075800 , TraesCS3D02G075800 , TraesCS3D02G075800
Populus -


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cDNA sequences
Sobic.003G070900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G133900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
2 Sobic.003G287900 phenylalanyl-tRNA synthetase, putative, expressed K01889: FARSA, phenylalanyl-tRNA synthetase alpha chain
3 Sobic.009G170200 translation initiation factor IF-2, chloroplast precursor, putative, expressed K02519: infB, translation initiation factor IF-2
4 Sobic.003G094350 - K01869: LARS, leucyl-tRNA synthetase
5 Sobic.001G118400 expressed protein -
6 Sobic.001G500600 pseudouridine synthase family protein, putative, expressed -
7 Sobic.004G353100 -(PubMedID : 26976818)@phosphate/phosphate translocator, putative, expressed K15283: solute carrier family 35, member E1
8 Sobic.008G074000 OsSCP65 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
9 Sobic.008G006100 MATE efflux protein, putative, expressed -
10 Sobic.003G233700 SET domain-containing protein, putative, expressed -
11 Sobic.007G103400 expressed protein -
12 Sobic.004G103300 Complex I intermediate-associated protein 30 domain containing protein, putative, expressed -
13 Sobic.006G097500 zeaxanthin epoxidase, chloroplast precursor, putative, expressed K09838: ZEP, zeaxanthin epoxidase
14 Sobic.005G028800 astaxanthin synthase KC28, putative, expressed -
15 Sobic.009G237000 OsDegp9 - Putative Deg protease homologue, expressed -
16 Sobic.002G028400 mTERF domain containing protein, expressed K15032: mTERF domain-containing protein, mitochondrial
17 Sobic.006G197300 expressed protein -
18 Sobic.002G298800 PAP fibrillin family domain containing protein, expressed -
19 Sobic.001G128600 -(PubMedID : 26465154)@DUF1517 domain containing protein, putative, expressed -
20 Sobic.001G368600 NAD dependent epimerase/dehydratase family protein, putative, expressed -


Gene co-expression network
sample Sobic003G070900 Sobic003G070900 Sobic002G133900 Sobic002G133900 Sobic003G070900--Sobic002G133900 Sobic003G287900 Sobic003G287900 Sobic003G070900--Sobic003G287900 Sobic009G170200 Sobic009G170200 Sobic003G070900--Sobic009G170200 Sobic003G094350 Sobic003G094350 Sobic003G070900--Sobic003G094350 Sobic001G118400 Sobic001G118400 Sobic003G070900--Sobic001G118400 Sobic001G500600 Sobic001G500600 Sobic003G070900--Sobic001G500600 Sobic004G353100 Sobic004G353100 Sobic003G070900--Sobic004G353100 Sobic008G074000 Sobic008G074000 Sobic003G070900--Sobic008G074000 Sobic008G006100 Sobic008G006100 Sobic003G070900--Sobic008G006100 Sobic002G133900--Sobic003G070900 Sobic002G133900--Sobic003G094350 Sobic002G133900--Sobic003G287900 Sobic002G405100 Sobic002G405100 Sobic002G133900--Sobic002G405100 Sobic002G133900--Sobic004G353100 Sobic005G100300 Sobic005G100300 Sobic002G133900--Sobic005G100300 Sobic002G028400 Sobic002G028400 Sobic002G133900--Sobic002G028400 Sobic007G103400 Sobic007G103400 Sobic002G133900--Sobic007G103400 Sobic002G133900--Sobic009G170200 Sobic003G287900--Sobic003G070900 Sobic003G287900--Sobic002G133900 Sobic003G287900--Sobic003G094350 Sobic003G233700 Sobic003G233700 Sobic003G287900--Sobic003G233700 Sobic003G287900--Sobic001G500600 Sobic003G287900--Sobic004G353100 Sobic004G336200 Sobic004G336200 Sobic003G287900--Sobic004G336200 Sobic003G287900--Sobic008G074000 Sobic003G287900--Sobic009G170200 Sobic009G170200--Sobic003G070900 Sobic006G232600 Sobic006G232600 Sobic009G170200--Sobic006G232600 Sobic007G087100 Sobic007G087100 Sobic009G170200--Sobic007G087100 Sobic004G103300 Sobic004G103300 Sobic009G170200--Sobic004G103300 Sobic009G170200--Sobic002G133900 Sobic001G077300 Sobic001G077300 Sobic009G170200--Sobic001G077300 Sobic009G170200--Sobic004G353100 Sobic001G378100 Sobic001G378100 Sobic009G170200--Sobic001G378100 Sobic009G170200--Sobic007G103400 Sobic003G094350--Sobic002G133900 Sobic003G094350--Sobic003G070900 Sobic003G094350--Sobic001G500600 Sobic003G094350--Sobic003G287900 Sobic003G094350--Sobic005G100300 Sobic003G094350--Sobic002G028400 Sobic003G094350--Sobic004G336200 Sobic010G002000 Sobic010G002000 Sobic003G094350--Sobic010G002000 Sobic003G094350--Sobic004G353100 Sobic006G155500 Sobic006G155500 Sobic001G118400--Sobic006G155500 Sobic001G118400--Sobic003G070900 Sobic003G328100 Sobic003G328100 Sobic001G118400--Sobic003G328100 Sobic004G165900 Sobic004G165900 Sobic001G118400--Sobic004G165900 Sobic001G286600 Sobic001G286600 Sobic001G118400--Sobic001G286600 Sobic002G061900 Sobic002G061900 Sobic001G118400--Sobic002G061900 Sobic010G056300 Sobic010G056300 Sobic001G118400--Sobic010G056300 Sobic004G252500 Sobic004G252500 Sobic001G118400--Sobic004G252500 Sobic006G140700 Sobic006G140700 Sobic001G118400--Sobic006G140700 Sobic001G500600--Sobic003G094350 Sobic001G500600--Sobic004G336200 Sobic006G197300 Sobic006G197300 Sobic001G500600--Sobic006G197300 Sobic001G500600--Sobic003G070900 Sobic003G141100 Sobic003G141100 Sobic001G500600--Sobic003G141100 Sobic003G232700 Sobic003G232700 Sobic001G500600--Sobic003G232700 Sobic001G500600--Sobic003G287900 Sobic001G500600--Sobic002G133900 Sobic003G372900 Sobic003G372900 Sobic001G500600--Sobic003G372900 Sobic004G353100--Sobic007G103400 Sobic009G237000 Sobic009G237000 Sobic004G353100--Sobic009G237000 Sobic004G353100--Sobic002G133900 Sobic002G298800 Sobic002G298800 Sobic004G353100--Sobic002G298800 Sobic010G035400 Sobic010G035400 Sobic004G353100--Sobic010G035400 Sobic004G353100--Sobic003G070900 Sobic004G353100--Sobic003G233700 Sobic009G132000 Sobic009G132000 Sobic004G353100--Sobic009G132000 Sobic004G353100--Sobic009G170200 Sobic008G074000--Sobic003G070900 Sobic008G074000--Sobic007G103400 Sobic008G074000--Sobic002G133900 Sobic008G074000--Sobic003G233700 Sobic008G074000--Sobic009G237000 Sobic001G504400 Sobic001G504400 Sobic008G074000--Sobic001G504400 Sobic008G074000--Sobic004G353100 Sobic008G074000--Sobic009G170200 Sobic009G219100 Sobic009G219100 Sobic008G074000--Sobic009G219100 Sobic002G112400 Sobic002G112400 Sobic008G006100--Sobic002G112400 Sobic001G128600 Sobic001G128600 Sobic008G006100--Sobic001G128600 Sobic009G062400 Sobic009G062400 Sobic008G006100--Sobic009G062400 Sobic008G006100--Sobic001G500600 Sobic008G006100--Sobic003G070900 Sobic008G006100--Sobic009G237000 Sobic001G134700 Sobic001G134700 Sobic008G006100--Sobic001G134700 Sobic008G006100--Sobic003G233700 Sobic008G006100--Sobic007G103400
Octagon: transcription factors


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