Gene annotation
Transcriptome id Sobic.007G103400.4,Sobic.007G103400.2,Sobic.007G103400.5,Sobic.007G103400.1
Synonym Sb07g013560
Functional annotation expressed protein
UniProt A0A1B6PGY7 , A0A1Z5R930 , A0A1Z5R934 , A0A1Z5R929
Pfam -
Panther DB PTHR37381 PTHR37381:SF1 PTHR37381:SF1 PTHR37381
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G64430 : Pentatricopeptide repeat (PPR) superfamily protein
RAP-DB (Rice) LOC_Os08g24390.1 : expressed protein
MaizeGDB (Corn) Zm00025a004089
Brachypodium KQK06932 , KQK06931
Barley -
Wheat TraesCS7B02G227200 , TraesCS7D02G323400 , TraesCS7D02G323400 , TraesCS7A02G326600 , TraesCS7A02G326600
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G237000 OsDegp9 - Putative Deg protease homologue, expressed -
2 Sobic.002G298800 PAP fibrillin family domain containing protein, expressed -
3 Sobic.004G353100 -(PubMedID : 26976818)@phosphate/phosphate translocator, putative, expressed K15283: solute carrier family 35, member E1
4 Sobic.010G035400 expressed protein -
5 Sobic.001G504400 expressed protein -
6 Sobic.003G306200 hemimethylated DNA binding domain containing protein, expressed -
7 Sobic.002G198300 zinc finger, C3HC4 type domain containing protein, expressed -
8 Sobic.003G233700 SET domain-containing protein, putative, expressed -
9 Sobic.002G275300 deoxyribodipyrimidine photolyase family protein, expressed -
10 Sobic.002G133900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
11 Sobic.003G398800 expressed protein -
12 Sobic.008G074000 OsSCP65 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
13 Sobic.003G094100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.009G170200 translation initiation factor IF-2, chloroplast precursor, putative, expressed K02519: infB, translation initiation factor IF-2
15 Sobic.007G108900 APE1, putative, expressed -
16 Sobic.003G160800 tetratricopeptide repeat domain containing protein, expressed -
17 Sobic.001G393300 HAD-superfamily hydrolase, subfamily IA, variant 3 containing protein, expressed -
18 Sobic.006G238200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
19 Sobic.002G220900 expressed protein -
20 Sobic.006G102000 PAP fibrillin family domain containing protein, expressed -


Gene co-expression network
sample Sobic007G103400 Sobic007G103400 Sobic009G237000 Sobic009G237000 Sobic007G103400--Sobic009G237000 Sobic002G298800 Sobic002G298800 Sobic007G103400--Sobic002G298800 Sobic004G353100 Sobic004G353100 Sobic007G103400--Sobic004G353100 Sobic010G035400 Sobic010G035400 Sobic007G103400--Sobic010G035400 Sobic001G504400 Sobic001G504400 Sobic007G103400--Sobic001G504400 Sobic003G306200 Sobic003G306200 Sobic007G103400--Sobic003G306200 Sobic002G198300 Sobic002G198300 Sobic007G103400--Sobic002G198300 Sobic003G233700 Sobic003G233700 Sobic007G103400--Sobic003G233700 Sobic002G275300 Sobic002G275300 Sobic007G103400--Sobic002G275300 Sobic009G237000--Sobic007G103400 Sobic009G237000--Sobic004G353100 Sobic006G102000 Sobic006G102000 Sobic009G237000--Sobic006G102000 Sobic009G237000--Sobic002G298800 Sobic009G237000--Sobic010G035400 Sobic009G237000--Sobic001G504400 Sobic009G237000--Sobic003G233700 Sobic007G108900 Sobic007G108900 Sobic009G237000--Sobic007G108900 Sobic008G074000 Sobic008G074000 Sobic009G237000--Sobic008G074000 Sobic001G393300 Sobic001G393300 Sobic002G298800--Sobic001G393300 Sobic002G298800--Sobic002G198300 Sobic004G103300 Sobic004G103300 Sobic002G298800--Sobic004G103300 Sobic002G298800--Sobic007G103400 Sobic006G097500 Sobic006G097500 Sobic002G298800--Sobic006G097500 Sobic001G368600 Sobic001G368600 Sobic002G298800--Sobic001G368600 Sobic003G094100 Sobic003G094100 Sobic002G298800--Sobic003G094100 Sobic002G298800--Sobic004G353100 Sobic002G298800--Sobic002G275300 Sobic004G353100--Sobic007G103400 Sobic004G353100--Sobic009G237000 Sobic002G133900 Sobic002G133900 Sobic004G353100--Sobic002G133900 Sobic004G353100--Sobic002G298800 Sobic004G353100--Sobic010G035400 Sobic003G070900 Sobic003G070900 Sobic004G353100--Sobic003G070900 Sobic004G353100--Sobic003G233700 Sobic009G132000 Sobic009G132000 Sobic004G353100--Sobic009G132000 Sobic009G170200 Sobic009G170200 Sobic004G353100--Sobic009G170200 Sobic010G035400--Sobic007G103400 Sobic007G225500 Sobic007G225500 Sobic010G035400--Sobic007G225500 Sobic004G336200 Sobic004G336200 Sobic010G035400--Sobic004G336200 Sobic010G035400--Sobic004G353100 Sobic010G035400--Sobic009G237000 Sobic010G035400--Sobic002G275300 Sobic003G160800 Sobic003G160800 Sobic010G035400--Sobic003G160800 Sobic006G207800 Sobic006G207800 Sobic010G035400--Sobic006G207800 Sobic003G387100 Sobic003G387100 Sobic010G035400--Sobic003G387100 Sobic002G206300 Sobic002G206300 Sobic001G504400--Sobic002G206300 Sobic001G504400--Sobic007G103400 Sobic009G038701 Sobic009G038701 Sobic001G504400--Sobic009G038701 Sobic003G185900 Sobic003G185900 Sobic001G504400--Sobic003G185900 Sobic001G258200 Sobic001G258200 Sobic001G504400--Sobic001G258200 Sobic010G125833 Sobic010G125833 Sobic001G504400--Sobic010G125833 Sobic008G033000 Sobic008G033000 Sobic001G504400--Sobic008G033000 Sobic001G180200 Sobic001G180200 Sobic001G504400--Sobic001G180200 Sobic001G378100 Sobic001G378100 Sobic001G504400--Sobic001G378100 Sobic003G306200--Sobic007G103400 Sobic003G398800 Sobic003G398800 Sobic003G306200--Sobic003G398800 Sobic003G306200--Sobic002G275300 Sobic003G306200--Sobic002G298800 Sobic003G306200--Sobic002G198300 Sobic003G306200--Sobic010G035400 Sobic009G056700 Sobic009G056700 Sobic003G306200--Sobic009G056700 Sobic006G238200 Sobic006G238200 Sobic003G306200--Sobic006G238200 Sobic006G142600 Sobic006G142600 Sobic003G306200--Sobic006G142600 Sobic002G198300--Sobic002G298800 Sobic002G198300--Sobic001G393300 Sobic002G198300--Sobic007G103400 Sobic002G198300--Sobic001G368600 Sobic002G198300--Sobic010G125833 Sobic002G198300--Sobic001G504400 Sobic002G198300--Sobic001G378100 Sobic002G198300--Sobic003G306200 Sobic001G536700 Sobic001G536700 Sobic002G198300--Sobic001G536700 Sobic003G233700--Sobic007G103400 Sobic003G287900 Sobic003G287900 Sobic003G233700--Sobic003G287900 Sobic003G233700--Sobic004G353100 Sobic003G233700--Sobic002G133900 Sobic003G233700--Sobic009G237000 Sobic003G233700--Sobic003G160800 Sobic003G233700--Sobic008G074000 Sobic003G094350 Sobic003G094350 Sobic003G233700--Sobic003G094350 Sobic001G500600 Sobic001G500600 Sobic003G233700--Sobic001G500600 Sobic002G275300--Sobic006G238200 Sobic010G181300 Sobic010G181300 Sobic002G275300--Sobic010G181300 Sobic001G491000 Sobic001G491000 Sobic002G275300--Sobic001G491000 Sobic002G275300--Sobic002G298800 Sobic002G275300--Sobic007G108900 Sobic002G275300--Sobic007G225500 Sobic002G275300--Sobic007G103400 Sobic002G275300--Sobic010G035400 Sobic002G275300--Sobic003G306200
Octagon: transcription factors


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