Gene annotation
Transcriptome id Sobic.003G398800.1
Synonym Sb03g043540
Functional annotation expressed protein
UniProt C5XG54 , A0A097PS07
Pfam PF10184
Panther DB PTHR36334 PTHR36334:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G65230 : Uncharacterized conserved protein (DUF2358)
RAP-DB (Rice) LOC_Os01g68450.1 : expressed protein
MaizeGDB (Corn) Zm00025a039370 , Zm00025a056219
Brachypodium KQK11152
Barley -
Wheat TraesCS3A02G418300
Populus -


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cDNA sequences
Sobic.003G398800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G238200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
2 Sobic.003G306200 hemimethylated DNA binding domain containing protein, expressed -
3 Sobic.009G056700 6PF-2-K/Fru-2,6-P2ASE liver isozyme, putative, expressed K01103: 6-phosphofructo-2-kinase / fructose-2,6-biphosphatase 3
4 Sobic.007G009200 adenosine monophosphate kinase(PubMedID : 26465154)@AMP kinase(PubMedID : 26976818)@adenylate kinase, putative, expressed K00939: adk, adenylate kinase
5 Sobic.007G103400 expressed protein -
6 Sobic.009G129300 heat shock protein DnaJ, putative, expressed -
7 Sobic.002G220900 expressed protein -
8 Sobic.003G431700 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase
9 Sobic.001G491000 ribulose-phosphate 3-epimerase, chloroplast precursor, putative, expressed K01783: rpe, ribulose-phosphate 3-epimerase
10 Sobic.003G367500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fructose-1,6-bisphosphatase, putative, expressed K03841: FBP, fructose-1,6-bisphosphatase I
11 Sobic.001G504400 expressed protein -
12 Sobic.010G181300 SOUL heme-binding protein, putative, expressed -
13 Sobic.010G067100 glutathione peroxidase, putative, expressed K00432: gpx, btuE, glutathione peroxidase
14 Sobic.003G024300 glutathione gamma-glutamylcysteinyltransferase 1, putative, expressed K05941: glutathione gamma-glutamylcysteinyltransferase
15 Sobic.010G039500 genetic modifier, putative, expressed -
16 Sobic.003G185900 protein phosphatase 2C, putative, expressed -
17 Sobic.002G275300 deoxyribodipyrimidine photolyase family protein, expressed -
18 Sobic.001G048400 pheophorbide a oxygenase, chloroplast precursor, putative, expressed -
19 Sobic.010G035400 expressed protein -
20 Sobic.004G154200 expressed protein -


Gene co-expression network
sample Sobic003G398800 Sobic003G398800 Sobic006G238200 Sobic006G238200 Sobic003G398800--Sobic006G238200 Sobic003G306200 Sobic003G306200 Sobic003G398800--Sobic003G306200 Sobic009G056700 Sobic009G056700 Sobic003G398800--Sobic009G056700 Sobic007G009200 Sobic007G009200 Sobic003G398800--Sobic007G009200 Sobic007G103400 Sobic007G103400 Sobic003G398800--Sobic007G103400 Sobic009G129300 Sobic009G129300 Sobic003G398800--Sobic009G129300 Sobic002G220900 Sobic002G220900 Sobic003G398800--Sobic002G220900 Sobic003G431700 Sobic003G431700 Sobic003G398800--Sobic003G431700 Sobic001G491000 Sobic001G491000 Sobic003G398800--Sobic001G491000 Sobic006G238200--Sobic001G491000 Sobic002G275300 Sobic002G275300 Sobic006G238200--Sobic002G275300 Sobic010G181300 Sobic010G181300 Sobic006G238200--Sobic010G181300 Sobic001G100000 Sobic001G100000 Sobic006G238200--Sobic001G100000 Sobic009G237100 Sobic009G237100 Sobic006G238200--Sobic009G237100 Sobic006G238200--Sobic003G398800 Sobic001G289500 Sobic001G289500 Sobic006G238200--Sobic001G289500 Sobic002G370600 Sobic002G370600 Sobic006G238200--Sobic002G370600 Sobic007G225500 Sobic007G225500 Sobic006G238200--Sobic007G225500 Sobic003G306200--Sobic007G103400 Sobic003G306200--Sobic003G398800 Sobic003G306200--Sobic002G275300 Sobic002G298800 Sobic002G298800 Sobic003G306200--Sobic002G298800 Sobic002G198300 Sobic002G198300 Sobic003G306200--Sobic002G198300 Sobic010G035400 Sobic010G035400 Sobic003G306200--Sobic010G035400 Sobic003G306200--Sobic009G056700 Sobic003G306200--Sobic006G238200 Sobic006G142600 Sobic006G142600 Sobic003G306200--Sobic006G142600 Sobic009G056700--Sobic003G398800 Sobic009G056700--Sobic003G431700 Sobic002G112400 Sobic002G112400 Sobic009G056700--Sobic002G112400 Sobic009G056700--Sobic007G103400 Sobic009G056700--Sobic003G306200 Sobic008G006100 Sobic008G006100 Sobic009G056700--Sobic008G006100 Sobic009G056700--Sobic002G275300 Sobic009G056700--Sobic002G298800 Sobic001G128600 Sobic001G128600 Sobic009G056700--Sobic001G128600 Sobic007G009200--Sobic009G237100 Sobic003G024300 Sobic003G024300 Sobic007G009200--Sobic003G024300 Sobic006G207800 Sobic006G207800 Sobic007G009200--Sobic006G207800 Sobic007G009200--Sobic003G398800 Sobic007G009200--Sobic006G238200 Sobic001G102800 Sobic001G102800 Sobic007G009200--Sobic001G102800 Sobic006G077400 Sobic006G077400 Sobic007G009200--Sobic006G077400 Sobic010G201700 Sobic010G201700 Sobic007G009200--Sobic010G201700 Sobic007G009200--Sobic010G035400 Sobic009G237000 Sobic009G237000 Sobic007G103400--Sobic009G237000 Sobic007G103400--Sobic002G298800 Sobic004G353100 Sobic004G353100 Sobic007G103400--Sobic004G353100 Sobic007G103400--Sobic010G035400 Sobic001G504400 Sobic001G504400 Sobic007G103400--Sobic001G504400 Sobic007G103400--Sobic003G306200 Sobic007G103400--Sobic002G198300 Sobic003G233700 Sobic003G233700 Sobic007G103400--Sobic003G233700 Sobic007G103400--Sobic002G275300 Sobic009G129300--Sobic001G491000 Sobic009G129300--Sobic010G181300 Sobic009G129300--Sobic003G398800 Sobic003G127800 Sobic003G127800 Sobic009G129300--Sobic003G127800 Sobic004G305800 Sobic004G305800 Sobic009G129300--Sobic004G305800 Sobic009G129300--Sobic006G238200 Sobic009G129300--Sobic002G275300 Sobic004G268000 Sobic004G268000 Sobic009G129300--Sobic004G268000 Sobic007G161500 Sobic007G161500 Sobic009G129300--Sobic007G161500 Sobic002G220900--Sobic003G398800 Sobic008G033000 Sobic008G033000 Sobic002G220900--Sobic008G033000 Sobic002G220900--Sobic007G103400 Sobic002G220900--Sobic001G504400 Sobic002G220900--Sobic007G009200 Sobic002G220900--Sobic009G237100 Sobic003G185900 Sobic003G185900 Sobic002G220900--Sobic003G185900 Sobic005G204200 Sobic005G204200 Sobic002G220900--Sobic005G204200 Sobic002G220900--Sobic010G035400 Sobic001G519800 Sobic001G519800 Sobic003G431700--Sobic001G519800 Sobic003G431700--Sobic003G398800 Sobic003G431700--Sobic006G207800 Sobic003G431700--Sobic002G370600 Sobic003G431700--Sobic006G238200 Sobic004G308700 Sobic004G308700 Sobic003G431700--Sobic004G308700 Sobic004G272100 Sobic004G272100 Sobic003G431700--Sobic004G272100 Sobic003G431700--Sobic010G181300 Sobic003G431700--Sobic001G102800 Sobic001G491000--Sobic006G238200 Sobic001G491000--Sobic010G181300 Sobic001G491000--Sobic001G100000 Sobic001G491000--Sobic002G275300 Sobic001G491000--Sobic001G289500 Sobic001G491000--Sobic009G129300 Sobic001G491000--Sobic002G370600 Sobic001G491000--Sobic009G237100 Sobic001G491000--Sobic004G305800
Octagon: transcription factors


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