Gene annotation
Transcriptome id Sobic.010G039500.1,Sobic.010G039500.5,Sobic.010G039500.3,Sobic.010G039500.6,Sobic.010G039500.2,Sobic.010G039500.4
Synonym Sb10g003500
Functional annotation genetic modifier, putative, expressed
UniProt A0A1W0VRD6 , A0A1W0VRC9 , C5Z498 , A0A1W0VRF4
Pfam PF13419
Panther DB PTHR18901 PTHR18901:SF46
NCBI CDD KOG2914; Predicted haloacid-halidohydrolase and related hydrolases
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G11570 : Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
RAP-DB (Rice) LOC_Os04g47020.1,LOC_Os04g47020.2,LOC_Os04g47020.3 : genetic modifier, putative, expressed
MaizeGDB (Corn) Zm00025a056838
Brachypodium PNT61632 , KQJ84000 , PNT61633
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.010G039500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G127800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.003G005000 expressed protein -
3 Sobic.003G367500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fructose-1,6-bisphosphatase, putative, expressed K03841: FBP, fructose-1,6-bisphosphatase I
4 Sobic.003G398800 expressed protein -
5 Sobic.005G101300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed -
6 Sobic.003G024300 glutathione gamma-glutamylcysteinyltransferase 1, putative, expressed K05941: glutathione gamma-glutamylcysteinyltransferase
7 Sobic.007G161500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PGR5, putative, expressed -
8 Sobic.001G491000 ribulose-phosphate 3-epimerase, chloroplast precursor, putative, expressed K01783: rpe, ribulose-phosphate 3-epimerase
9 Sobic.006G238200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
10 Sobic.010G188300 fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
11 Sobic.004G059800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsHKT1@3 - Na+ transporter, expressed -
12 Sobic.009G129300 heat shock protein DnaJ, putative, expressed -
13 Sobic.009G256100 expressed protein -
14 Sobic.001G289500 kinase, pfkB family, putative, expressed -
15 Sobic.010G181300 SOUL heme-binding protein, putative, expressed -
16 Sobic.007G009200 adenosine monophosphate kinase(PubMedID : 26465154)@AMP kinase(PubMedID : 26976818)@adenylate kinase, putative, expressed K00939: adk, adenylate kinase
17 Sobic.003G094100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.003G185900 protein phosphatase 2C, putative, expressed -
19 Sobic.006G077400 PAP fibrillin family domain containing protein, expressed -
20 Sobic.003G306200 hemimethylated DNA binding domain containing protein, expressed -


Gene co-expression network
sample Sobic010G039500 Sobic010G039500 Sobic003G127800 Sobic003G127800 Sobic010G039500--Sobic003G127800 Sobic003G005000 Sobic003G005000 Sobic010G039500--Sobic003G005000 Sobic003G367500 Sobic003G367500 Sobic010G039500--Sobic003G367500 Sobic003G398800 Sobic003G398800 Sobic010G039500--Sobic003G398800 Sobic005G101300 Sobic005G101300 Sobic010G039500--Sobic005G101300 Sobic003G024300 Sobic003G024300 Sobic010G039500--Sobic003G024300 Sobic007G161500 Sobic007G161500 Sobic010G039500--Sobic007G161500 Sobic001G491000 Sobic001G491000 Sobic010G039500--Sobic001G491000 Sobic006G238200 Sobic006G238200 Sobic010G039500--Sobic006G238200 Sobic003G127800--Sobic007G161500 Sobic004G059800 Sobic004G059800 Sobic003G127800--Sobic004G059800 Sobic003G127800--Sobic010G039500 Sobic003G127800--Sobic001G491000 Sobic009G129300 Sobic009G129300 Sobic003G127800--Sobic009G129300 Sobic005G056400 Sobic005G056400 Sobic003G127800--Sobic005G056400 Sobic001G329400 Sobic001G329400 Sobic003G127800--Sobic001G329400 Sobic003G127800--Sobic003G367500 Sobic006G153400 Sobic006G153400 Sobic003G127800--Sobic006G153400 Sobic001G289500 Sobic001G289500 Sobic003G005000--Sobic001G289500 Sobic003G094100 Sobic003G094100 Sobic003G005000--Sobic003G094100 Sobic009G132000 Sobic009G132000 Sobic003G005000--Sobic009G132000 Sobic002G306800 Sobic002G306800 Sobic003G005000--Sobic002G306800 Sobic007G108900 Sobic007G108900 Sobic003G005000--Sobic007G108900 Sobic003G005000--Sobic010G039500 Sobic009G133700 Sobic009G133700 Sobic003G005000--Sobic009G133700 Sobic007G157300 Sobic007G157300 Sobic003G005000--Sobic007G157300 Sobic004G035900 Sobic004G035900 Sobic003G005000--Sobic004G035900 Sobic004G215800 Sobic004G215800 Sobic003G367500--Sobic004G215800 Sobic007G105500 Sobic007G105500 Sobic003G367500--Sobic007G105500 Sobic003G367500--Sobic003G398800 Sobic004G154200 Sobic004G154200 Sobic003G367500--Sobic004G154200 Sobic003G367500--Sobic010G039500 Sobic002G324500 Sobic002G324500 Sobic003G367500--Sobic002G324500 Sobic003G367500--Sobic003G127800 Sobic003G367500--Sobic004G059800 Sobic005G089600 Sobic005G089600 Sobic003G367500--Sobic005G089600 Sobic003G398800--Sobic006G238200 Sobic003G306200 Sobic003G306200 Sobic003G398800--Sobic003G306200 Sobic009G056700 Sobic009G056700 Sobic003G398800--Sobic009G056700 Sobic007G009200 Sobic007G009200 Sobic003G398800--Sobic007G009200 Sobic007G103400 Sobic007G103400 Sobic003G398800--Sobic007G103400 Sobic003G398800--Sobic009G129300 Sobic002G220900 Sobic002G220900 Sobic003G398800--Sobic002G220900 Sobic003G431700 Sobic003G431700 Sobic003G398800--Sobic003G431700 Sobic003G398800--Sobic001G491000 Sobic005G101300--Sobic010G039500 Sobic005G101300--Sobic003G367500 Sobic005G101300--Sobic003G024300 Sobic005G101300--Sobic007G009200 Sobic005G101300--Sobic003G398800 Sobic005G101300--Sobic001G329400 Sobic004G356400 Sobic004G356400 Sobic005G101300--Sobic004G356400 Sobic001G134100 Sobic001G134100 Sobic005G101300--Sobic001G134100 Sobic005G101300--Sobic007G105500 Sobic003G024300--Sobic007G009200 Sobic006G077400 Sobic006G077400 Sobic003G024300--Sobic006G077400 Sobic003G024300--Sobic001G329400 Sobic003G024300--Sobic001G491000 Sobic009G104800 Sobic009G104800 Sobic003G024300--Sobic009G104800 Sobic003G024300--Sobic003G398800 Sobic004G125700 Sobic004G125700 Sobic003G024300--Sobic004G125700 Sobic003G024300--Sobic007G161500 Sobic010G201700 Sobic010G201700 Sobic003G024300--Sobic010G201700 Sobic007G161500--Sobic005G056400 Sobic007G161500--Sobic003G127800 Sobic010G188300 Sobic010G188300 Sobic007G161500--Sobic010G188300 Sobic007G161500--Sobic001G329400 Sobic003G370000 Sobic003G370000 Sobic007G161500--Sobic003G370000 Sobic007G161500--Sobic001G491000 Sobic007G161500--Sobic001G289500 Sobic004G305800 Sobic004G305800 Sobic007G161500--Sobic004G305800 Sobic007G161500--Sobic003G024300 Sobic001G491000--Sobic006G238200 Sobic010G181300 Sobic010G181300 Sobic001G491000--Sobic010G181300 Sobic001G100000 Sobic001G100000 Sobic001G491000--Sobic001G100000 Sobic002G275300 Sobic002G275300 Sobic001G491000--Sobic002G275300 Sobic001G491000--Sobic001G289500 Sobic001G491000--Sobic009G129300 Sobic002G370600 Sobic002G370600 Sobic001G491000--Sobic002G370600 Sobic009G237100 Sobic009G237100 Sobic001G491000--Sobic009G237100 Sobic001G491000--Sobic004G305800 Sobic006G238200--Sobic001G491000 Sobic006G238200--Sobic002G275300 Sobic006G238200--Sobic010G181300 Sobic006G238200--Sobic001G100000 Sobic006G238200--Sobic009G237100 Sobic006G238200--Sobic003G398800 Sobic006G238200--Sobic001G289500 Sobic006G238200--Sobic002G370600 Sobic007G225500 Sobic007G225500 Sobic006G238200--Sobic007G225500
Octagon: transcription factors


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