Gene annotation
Transcriptome id Sobic.006G077400.1
Synonym Sb06g016450
Functional annotation PAP fibrillin family domain containing protein, expressed
UniProt C5YGD3
Pfam PF04755
Panther DB PTHR31906 PTHR31906:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G09820 : Plastid-lipid associated protein PAP / fibrillin family protein
RAP-DB (Rice) LOC_Os04g34460.1 : PAP fibrillin family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a011443
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G024300 glutathione gamma-glutamylcysteinyltransferase 1, putative, expressed K05941: glutathione gamma-glutamylcysteinyltransferase
2 Sobic.007G225500 expressed protein -
3 Sobic.007G009200 adenosine monophosphate kinase(PubMedID : 26465154)@AMP kinase(PubMedID : 26976818)@adenylate kinase, putative, expressed K00939: adk, adenylate kinase
4 Sobic.005G200200 expressed protein -
5 Sobic.007G140800 Fatty acid desaturase 6 (omega-6 fatty acid desaturase) FAD6 (At)(PubMedID : 27208977)@omega-6 fatty acid desaturase, chloroplast precursor, putative, expressed K10255: FAD6, acyl-lipid omega-6 desaturase (Delta-12 desaturase)
6 Sobic.001G491000 ribulose-phosphate 3-epimerase, chloroplast precursor, putative, expressed K01783: rpe, ribulose-phosphate 3-epimerase
7 Sobic.010G201700 GA16396-PA, putative, expressed -
8 Sobic.010G035400 expressed protein -
9 Sobic.006G238200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
10 Sobic.009G104800 AMP deaminase, putative, expressed K01490: AMP deaminase
11 Sobic.003G002300 Glucose-6-phosphate/phosphate translocator-related(PubMedID : 26465154)@-(PubMedID : 26976818)@triosephosphate/phosphate translocator(PubMedID : 27016024)@DUF250 domain containing protein, putative, expressed K15283: solute carrier family 35, member E1
12 Sobic.004G272100 phosphoribulokinase/Uridine kinase family protein, expressed K00855: PRK, phosphoribulokinase
13 Sobic.007G161500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PGR5, putative, expressed -
14 Sobic.009G043000 thioredoxin, putative, expressed -
15 Sobic.004G125700 isochorismatase family protein, putative, expressed -
16 Sobic.010G181300 SOUL heme-binding protein, putative, expressed -
17 Sobic.001G102800 expressed protein -
18 Sobic.009G237100 -(PubMedID : 26976818)@bile acid sodium symporter, putative, expressed K14347: SLC10A7, solute carrier family 10 (sodium/bile acid cotransporter), member 7
19 Sobic.010G039500 genetic modifier, putative, expressed -
20 Sobic.003G398800 expressed protein -


Gene co-expression network
sample Sobic006G077400 Sobic006G077400 Sobic003G024300 Sobic003G024300 Sobic006G077400--Sobic003G024300 Sobic007G225500 Sobic007G225500 Sobic006G077400--Sobic007G225500 Sobic007G009200 Sobic007G009200 Sobic006G077400--Sobic007G009200 Sobic005G200200 Sobic005G200200 Sobic006G077400--Sobic005G200200 Sobic007G140800 Sobic007G140800 Sobic006G077400--Sobic007G140800 Sobic001G491000 Sobic001G491000 Sobic006G077400--Sobic001G491000 Sobic010G201700 Sobic010G201700 Sobic006G077400--Sobic010G201700 Sobic010G035400 Sobic010G035400 Sobic006G077400--Sobic010G035400 Sobic006G238200 Sobic006G238200 Sobic006G077400--Sobic006G238200 Sobic003G024300--Sobic007G009200 Sobic003G024300--Sobic006G077400 Sobic001G329400 Sobic001G329400 Sobic003G024300--Sobic001G329400 Sobic003G024300--Sobic001G491000 Sobic009G104800 Sobic009G104800 Sobic003G024300--Sobic009G104800 Sobic003G398800 Sobic003G398800 Sobic003G024300--Sobic003G398800 Sobic004G125700 Sobic004G125700 Sobic003G024300--Sobic004G125700 Sobic007G161500 Sobic007G161500 Sobic003G024300--Sobic007G161500 Sobic003G024300--Sobic010G201700 Sobic003G002300 Sobic003G002300 Sobic007G225500--Sobic003G002300 Sobic007G225500--Sobic010G035400 Sobic008G102000 Sobic008G102000 Sobic007G225500--Sobic008G102000 Sobic007G052400 Sobic007G052400 Sobic007G225500--Sobic007G052400 Sobic008G171300 Sobic008G171300 Sobic007G225500--Sobic008G171300 Sobic009G043000 Sobic009G043000 Sobic007G225500--Sobic009G043000 Sobic002G275300 Sobic002G275300 Sobic007G225500--Sobic002G275300 Sobic007G225500--Sobic006G077400 Sobic007G225500--Sobic010G201700 Sobic009G237100 Sobic009G237100 Sobic007G009200--Sobic009G237100 Sobic007G009200--Sobic003G024300 Sobic006G207800 Sobic006G207800 Sobic007G009200--Sobic006G207800 Sobic007G009200--Sobic003G398800 Sobic007G009200--Sobic006G238200 Sobic001G102800 Sobic001G102800 Sobic007G009200--Sobic001G102800 Sobic007G009200--Sobic006G077400 Sobic007G009200--Sobic010G201700 Sobic007G009200--Sobic010G035400 Sobic005G200200--Sobic006G077400 Sobic005G200200--Sobic007G225500 Sobic003G370000 Sobic003G370000 Sobic005G200200--Sobic003G370000 Sobic005G056400 Sobic005G056400 Sobic005G200200--Sobic005G056400 Sobic007G173800 Sobic007G173800 Sobic005G200200--Sobic007G173800 Sobic002G277100 Sobic002G277100 Sobic005G200200--Sobic002G277100 Sobic005G200200--Sobic009G043000 Sobic010G095000 Sobic010G095000 Sobic005G200200--Sobic010G095000 Sobic005G200200--Sobic003G002300 Sobic007G140800--Sobic006G077400 Sobic003G303700 Sobic003G303700 Sobic007G140800--Sobic003G303700 Sobic007G140800--Sobic010G201700 Sobic007G140800--Sobic003G024300 Sobic010G153900 Sobic010G153900 Sobic007G140800--Sobic010G153900 Sobic007G140800--Sobic001G329400 Sobic007G140800--Sobic007G009200 Sobic007G140800--Sobic004G125700 Sobic007G140800--Sobic009G237100 Sobic001G491000--Sobic006G238200 Sobic010G181300 Sobic010G181300 Sobic001G491000--Sobic010G181300 Sobic001G100000 Sobic001G100000 Sobic001G491000--Sobic001G100000 Sobic001G491000--Sobic002G275300 Sobic001G289500 Sobic001G289500 Sobic001G491000--Sobic001G289500 Sobic009G129300 Sobic009G129300 Sobic001G491000--Sobic009G129300 Sobic002G370600 Sobic002G370600 Sobic001G491000--Sobic002G370600 Sobic001G491000--Sobic009G237100 Sobic004G305800 Sobic004G305800 Sobic001G491000--Sobic004G305800 Sobic010G201700--Sobic009G043000 Sobic004G272100 Sobic004G272100 Sobic010G201700--Sobic004G272100 Sobic010G201700--Sobic003G002300 Sobic010G201700--Sobic001G102800 Sobic001G519800 Sobic001G519800 Sobic010G201700--Sobic001G519800 Sobic010G201700--Sobic007G225500 Sobic010G201700--Sobic008G102000 Sobic010G201700--Sobic006G207800 Sobic004G308700 Sobic004G308700 Sobic010G201700--Sobic004G308700 Sobic007G103400 Sobic007G103400 Sobic010G035400--Sobic007G103400 Sobic010G035400--Sobic007G225500 Sobic004G336200 Sobic004G336200 Sobic010G035400--Sobic004G336200 Sobic004G353100 Sobic004G353100 Sobic010G035400--Sobic004G353100 Sobic009G237000 Sobic009G237000 Sobic010G035400--Sobic009G237000 Sobic010G035400--Sobic002G275300 Sobic003G160800 Sobic003G160800 Sobic010G035400--Sobic003G160800 Sobic010G035400--Sobic006G207800 Sobic003G387100 Sobic003G387100 Sobic010G035400--Sobic003G387100 Sobic006G238200--Sobic001G491000 Sobic006G238200--Sobic002G275300 Sobic006G238200--Sobic010G181300 Sobic006G238200--Sobic001G100000 Sobic006G238200--Sobic009G237100 Sobic006G238200--Sobic003G398800 Sobic006G238200--Sobic001G289500 Sobic006G238200--Sobic002G370600 Sobic006G238200--Sobic007G225500
Octagon: transcription factors


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