Gene annotation
Transcriptome id Sobic.003G024300.1
Synonym ATPCS1, CAD1, Sb03g002330, ARA8, PCS1
Functional annotation glutathione gamma-glutamylcysteinyltransferase 1, putative, expressed
UniProt A0A1B6Q0Z1
Pfam PF05023 PF09328
Panther DB PTHR33447 PTHR33447:SF2
NCBI CDD KOG0632; Phytochelatin synthase
KEGG Orthology K05941; glutathione gamma-glutamylcysteinyltransferase
Gene Ontology GO:0016756; glutathione gamma-glutamylcysteinyltransferase activity GO:0010038response to metal ion


Orthologs (automatic annotation)
TAIR AT5G44070 : phytochelatin synthase 1 (PCS1)
RAP-DB (Rice) LOC_Os06g01260.1 : glutathione gamma-glutamylcysteinyltransferase 1, putative, expressed
MaizeGDB (Corn) Zm00025a035879
Brachypodium KQK18782
Barley HORVU1Hr1G081110.2 , HORVU1Hr1G081110.3 , HORVU1Hr1G081110.1 , HORVU5Hr1G059310.11 , HORVU5Hr1G059310.12 , HORVU5Hr1G059310.6 , HORVU5Hr1G059310.1 , HORVU5Hr1G059310.2 , HORVU5Hr1G059310.8 , HORVU1Hr1G078690.21 , HORVU1Hr1G078690.23 , HORVU1Hr1G078690.24 , HORVU7Hr1G040110.3 , HORVU7Hr1G040110.2 , HORVU7Hr1G040110.1 , HORVU7Hr1G040110.7 , HORVU7Hr1G040110.6 , HORVU7Hr1G040110.5 , HORVU7Hr1G040110.4 , HORVU1Hr1G078690.11 , HORVU1Hr1G078690.12
Wheat TraesCS4D02G349600 , TraesCS7D02G197800 , TraesCS7D02G197800 , TraesCS7B02G102000 , TraesCS7B02G102000 , TraesCS7A02G196300 , TraesCS7A02G196300 , TraesCS5A02G525400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G009200 adenosine monophosphate kinase(PubMedID : 26465154)@AMP kinase(PubMedID : 26976818)@adenylate kinase, putative, expressed K00939: adk, adenylate kinase
2 Sobic.006G077400 PAP fibrillin family domain containing protein, expressed -
3 Sobic.001G329400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1230 domain containing protein, expressed -
4 Sobic.001G491000 ribulose-phosphate 3-epimerase, chloroplast precursor, putative, expressed K01783: rpe, ribulose-phosphate 3-epimerase
5 Sobic.009G104800 AMP deaminase, putative, expressed K01490: AMP deaminase
6 Sobic.003G398800 expressed protein -
7 Sobic.004G125700 isochorismatase family protein, putative, expressed -
8 Sobic.007G161500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PGR5, putative, expressed -
9 Sobic.010G201700 GA16396-PA, putative, expressed -
10 Sobic.004G272100 phosphoribulokinase/Uridine kinase family protein, expressed K00855: PRK, phosphoribulokinase
11 Sobic.006G238200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
12 Sobic.007G140800 Fatty acid desaturase 6 (omega-6 fatty acid desaturase) FAD6 (At)(PubMedID : 27208977)@omega-6 fatty acid desaturase, chloroplast precursor, putative, expressed K10255: FAD6, acyl-lipid omega-6 desaturase (Delta-12 desaturase)
13 Sobic.009G129300 heat shock protein DnaJ, putative, expressed -
14 Sobic.010G039500 genetic modifier, putative, expressed -
15 Sobic.010G181300 SOUL heme-binding protein, putative, expressed -
16 Sobic.006G207800 Plastid-lipid associated protein PAP / fibrillin family protein(PubMedID : 26465154)@PAP fibrillin family domain containing protein, expressed -
17 Sobic.004G308700 photosystem I light harvesting complex gene 5(PubMedID : 26465154)@chlorophyll A-B binding protein, putative, expressed K08911: light-harvesting complex I chlorophyll a/b binding protein 5
18 Sobic.003G127800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.009G237100 -(PubMedID : 26976818)@bile acid sodium symporter, putative, expressed K14347: SLC10A7, solute carrier family 10 (sodium/bile acid cotransporter), member 7
20 Sobic.003G367500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fructose-1,6-bisphosphatase, putative, expressed K03841: FBP, fructose-1,6-bisphosphatase I


Gene co-expression network
sample Sobic003G024300 Sobic003G024300 Sobic007G009200 Sobic007G009200 Sobic003G024300--Sobic007G009200 Sobic006G077400 Sobic006G077400 Sobic003G024300--Sobic006G077400 Sobic001G329400 Sobic001G329400 Sobic003G024300--Sobic001G329400 Sobic001G491000 Sobic001G491000 Sobic003G024300--Sobic001G491000 Sobic009G104800 Sobic009G104800 Sobic003G024300--Sobic009G104800 Sobic003G398800 Sobic003G398800 Sobic003G024300--Sobic003G398800 Sobic004G125700 Sobic004G125700 Sobic003G024300--Sobic004G125700 Sobic007G161500 Sobic007G161500 Sobic003G024300--Sobic007G161500 Sobic010G201700 Sobic010G201700 Sobic003G024300--Sobic010G201700 Sobic009G237100 Sobic009G237100 Sobic007G009200--Sobic009G237100 Sobic007G009200--Sobic003G024300 Sobic006G207800 Sobic006G207800 Sobic007G009200--Sobic006G207800 Sobic007G009200--Sobic003G398800 Sobic006G238200 Sobic006G238200 Sobic007G009200--Sobic006G238200 Sobic001G102800 Sobic001G102800 Sobic007G009200--Sobic001G102800 Sobic007G009200--Sobic006G077400 Sobic007G009200--Sobic010G201700 Sobic010G035400 Sobic010G035400 Sobic007G009200--Sobic010G035400 Sobic006G077400--Sobic003G024300 Sobic007G225500 Sobic007G225500 Sobic006G077400--Sobic007G225500 Sobic006G077400--Sobic007G009200 Sobic005G200200 Sobic005G200200 Sobic006G077400--Sobic005G200200 Sobic007G140800 Sobic007G140800 Sobic006G077400--Sobic007G140800 Sobic006G077400--Sobic001G491000 Sobic006G077400--Sobic010G201700 Sobic006G077400--Sobic010G035400 Sobic006G077400--Sobic006G238200 Sobic001G329400--Sobic003G024300 Sobic001G329400--Sobic007G161500 Sobic006G244000 Sobic006G244000 Sobic001G329400--Sobic006G244000 Sobic003G127800 Sobic003G127800 Sobic001G329400--Sobic003G127800 Sobic009G129300 Sobic009G129300 Sobic001G329400--Sobic009G129300 Sobic001G329400--Sobic007G140800 Sobic004G283100 Sobic004G283100 Sobic001G329400--Sobic004G283100 Sobic001G329400--Sobic001G491000 Sobic001G329400--Sobic009G104800 Sobic001G491000--Sobic006G238200 Sobic010G181300 Sobic010G181300 Sobic001G491000--Sobic010G181300 Sobic001G100000 Sobic001G100000 Sobic001G491000--Sobic001G100000 Sobic002G275300 Sobic002G275300 Sobic001G491000--Sobic002G275300 Sobic001G289500 Sobic001G289500 Sobic001G491000--Sobic001G289500 Sobic001G491000--Sobic009G129300 Sobic002G370600 Sobic002G370600 Sobic001G491000--Sobic002G370600 Sobic001G491000--Sobic009G237100 Sobic004G305800 Sobic004G305800 Sobic001G491000--Sobic004G305800 Sobic009G104800--Sobic004G125700 Sobic009G104800--Sobic003G024300 Sobic009G104800--Sobic001G329400 Sobic009G104800--Sobic006G077400 Sobic009G104800--Sobic006G244000 Sobic009G104800--Sobic007G140800 Sobic003G256700 Sobic003G256700 Sobic009G104800--Sobic003G256700 Sobic009G104800--Sobic007G161500 Sobic010G095000 Sobic010G095000 Sobic009G104800--Sobic010G095000 Sobic003G398800--Sobic006G238200 Sobic003G306200 Sobic003G306200 Sobic003G398800--Sobic003G306200 Sobic009G056700 Sobic009G056700 Sobic003G398800--Sobic009G056700 Sobic003G398800--Sobic007G009200 Sobic007G103400 Sobic007G103400 Sobic003G398800--Sobic007G103400 Sobic003G398800--Sobic009G129300 Sobic002G220900 Sobic002G220900 Sobic003G398800--Sobic002G220900 Sobic003G431700 Sobic003G431700 Sobic003G398800--Sobic003G431700 Sobic003G398800--Sobic001G491000 Sobic004G125700--Sobic009G104800 Sobic004G125700--Sobic003G024300 Sobic004G125700--Sobic007G140800 Sobic004G125700--Sobic001G329400 Sobic004G125700--Sobic006G077400 Sobic004G125700--Sobic010G201700 Sobic003G431900 Sobic003G431900 Sobic004G125700--Sobic003G431900 Sobic004G125700--Sobic006G244000 Sobic004G272100 Sobic004G272100 Sobic004G125700--Sobic004G272100 Sobic005G056400 Sobic005G056400 Sobic007G161500--Sobic005G056400 Sobic007G161500--Sobic003G127800 Sobic010G188300 Sobic010G188300 Sobic007G161500--Sobic010G188300 Sobic007G161500--Sobic001G329400 Sobic003G370000 Sobic003G370000 Sobic007G161500--Sobic003G370000 Sobic007G161500--Sobic001G491000 Sobic007G161500--Sobic001G289500 Sobic007G161500--Sobic004G305800 Sobic007G161500--Sobic003G024300 Sobic009G043000 Sobic009G043000 Sobic010G201700--Sobic009G043000 Sobic010G201700--Sobic004G272100 Sobic003G002300 Sobic003G002300 Sobic010G201700--Sobic003G002300 Sobic010G201700--Sobic001G102800 Sobic001G519800 Sobic001G519800 Sobic010G201700--Sobic001G519800 Sobic010G201700--Sobic007G225500 Sobic008G102000 Sobic008G102000 Sobic010G201700--Sobic008G102000 Sobic010G201700--Sobic006G207800 Sobic004G308700 Sobic004G308700 Sobic010G201700--Sobic004G308700
Octagon: transcription factors


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