Gene annotation
Transcriptome id Sobic.005G200200.1
Synonym
Functional annotation expressed protein
UniProt A0A1Z5RK23
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os12g34500.1 : expressed protein
MaizeGDB (Corn) Zm00025a029221
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G077400 PAP fibrillin family domain containing protein, expressed -
2 Sobic.007G225500 expressed protein -
3 Sobic.003G370000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chlorophyll A-B binding protein, putative, expressed K03542: photosystem II 22kDa protein
4 Sobic.005G056400 Fructose-bisphosphate aldolase(PubMedID : 26186930)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"Fructose-bisphosphate aldolase, putative (Os)"(PubMedID : 27208977)@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
5 Sobic.007G173800 uncharacterized protein ycf39, putative, expressed -
6 Sobic.002G277100 -(PubMedID : 29017446)@triosephosphate isomerase, chloroplast precursor, putative, expressed K01803: TPI, triosephosphate isomerase (TIM)
7 Sobic.009G043000 thioredoxin, putative, expressed -
8 Sobic.010G095000 kinase, pfkB family, putative, expressed K00847: E2.7.1.4, fructokinase
9 Sobic.003G002300 Glucose-6-phosphate/phosphate translocator-related(PubMedID : 26465154)@-(PubMedID : 26976818)@triosephosphate/phosphate translocator(PubMedID : 27016024)@DUF250 domain containing protein, putative, expressed K15283: solute carrier family 35, member E1
10 Sobic.007G161500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PGR5, putative, expressed -
11 Sobic.001G020100 expressed protein -
12 Sobic.006G067400 Ser/Thr protein phosphatase family protein, putative, expressed -
13 Sobic.010G201700 GA16396-PA, putative, expressed -
14 Sobic.008G102000 Chaperone DnaJ-domain superfamily protein(PubMedID : 26465154)@heat shock protein DnaJ, putative, expressed -
15 Sobic.008G171300 methyltransferase domain containing protein, putative, expressed K12502: VTE3, MPBQ/MSBQ methyltransferase
16 Sobic.007G140800 Fatty acid desaturase 6 (omega-6 fatty acid desaturase) FAD6 (At)(PubMedID : 27208977)@omega-6 fatty acid desaturase, chloroplast precursor, putative, expressed K10255: FAD6, acyl-lipid omega-6 desaturase (Delta-12 desaturase)
17 Sobic.001G289500 kinase, pfkB family, putative, expressed -
18 Sobic.001G076900 Uncharacterised protein family (UPF0497)(PubMedID : 26465154)@membrane associated DUF588 domain containing protein, putative, expressed -
19 Sobic.008G061401 - -
20 Sobic.009G183700 XP_002441313.1 plastidic phosphoglycerate kinase(PubMedID : 26904072)@phosphoglycerate kinase(PubMedID : 29017446)@phosphoglycerate kinase protein, putative, expressed K00927: PGK, phosphoglycerate kinase


Gene co-expression network
sample Sobic005G200200 Sobic005G200200 Sobic006G077400 Sobic006G077400 Sobic005G200200--Sobic006G077400 Sobic007G225500 Sobic007G225500 Sobic005G200200--Sobic007G225500 Sobic003G370000 Sobic003G370000 Sobic005G200200--Sobic003G370000 Sobic005G056400 Sobic005G056400 Sobic005G200200--Sobic005G056400 Sobic007G173800 Sobic007G173800 Sobic005G200200--Sobic007G173800 Sobic002G277100 Sobic002G277100 Sobic005G200200--Sobic002G277100 Sobic009G043000 Sobic009G043000 Sobic005G200200--Sobic009G043000 Sobic010G095000 Sobic010G095000 Sobic005G200200--Sobic010G095000 Sobic003G002300 Sobic003G002300 Sobic005G200200--Sobic003G002300 Sobic003G024300 Sobic003G024300 Sobic006G077400--Sobic003G024300 Sobic006G077400--Sobic007G225500 Sobic007G009200 Sobic007G009200 Sobic006G077400--Sobic007G009200 Sobic006G077400--Sobic005G200200 Sobic007G140800 Sobic007G140800 Sobic006G077400--Sobic007G140800 Sobic001G491000 Sobic001G491000 Sobic006G077400--Sobic001G491000 Sobic010G201700 Sobic010G201700 Sobic006G077400--Sobic010G201700 Sobic010G035400 Sobic010G035400 Sobic006G077400--Sobic010G035400 Sobic006G238200 Sobic006G238200 Sobic006G077400--Sobic006G238200 Sobic007G225500--Sobic003G002300 Sobic007G225500--Sobic010G035400 Sobic008G102000 Sobic008G102000 Sobic007G225500--Sobic008G102000 Sobic007G052400 Sobic007G052400 Sobic007G225500--Sobic007G052400 Sobic008G171300 Sobic008G171300 Sobic007G225500--Sobic008G171300 Sobic007G225500--Sobic009G043000 Sobic002G275300 Sobic002G275300 Sobic007G225500--Sobic002G275300 Sobic007G225500--Sobic006G077400 Sobic007G225500--Sobic010G201700 Sobic007G161500 Sobic007G161500 Sobic003G370000--Sobic007G161500 Sobic001G289500 Sobic001G289500 Sobic003G370000--Sobic001G289500 Sobic003G370000--Sobic005G056400 Sobic002G370600 Sobic002G370600 Sobic003G370000--Sobic002G370600 Sobic002G314300 Sobic002G314300 Sobic003G370000--Sobic002G314300 Sobic004G305800 Sobic004G305800 Sobic003G370000--Sobic004G305800 Sobic001G020100 Sobic001G020100 Sobic003G370000--Sobic001G020100 Sobic004G238600 Sobic004G238600 Sobic003G370000--Sobic004G238600 Sobic001G076900 Sobic001G076900 Sobic003G370000--Sobic001G076900 Sobic005G056400--Sobic007G161500 Sobic005G056400--Sobic004G305800 Sobic003G127800 Sobic003G127800 Sobic005G056400--Sobic003G127800 Sobic005G056400--Sobic003G370000 Sobic010G188300 Sobic010G188300 Sobic005G056400--Sobic010G188300 Sobic005G056400--Sobic001G076900 Sobic005G056400--Sobic001G491000 Sobic001G329400 Sobic001G329400 Sobic005G056400--Sobic001G329400 Sobic006G057866 Sobic006G057866 Sobic005G056400--Sobic006G057866 Sobic007G173800--Sobic008G102000 Sobic004G359600 Sobic004G359600 Sobic007G173800--Sobic004G359600 Sobic007G173800--Sobic007G225500 Sobic007G173800--Sobic009G043000 Sobic010G277600 Sobic010G277600 Sobic007G173800--Sobic010G277600 Sobic007G173800--Sobic003G002300 Sobic009G183700 Sobic009G183700 Sobic007G173800--Sobic009G183700 Sobic007G173800--Sobic002G277100 Sobic007G173800--Sobic006G238200 Sobic002G277100--Sobic009G183700 Sobic010G005500 Sobic010G005500 Sobic002G277100--Sobic010G005500 Sobic002G277100--Sobic010G277600 Sobic002G277100--Sobic003G002300 Sobic002G277100--Sobic007G052400 Sobic002G277100--Sobic007G225500 Sobic009G030900 Sobic009G030900 Sobic002G277100--Sobic009G030900 Sobic002G277100--Sobic007G173800 Sobic002G277100--Sobic009G043000 Sobic009G043000--Sobic010G201700 Sobic009G043000--Sobic003G002300 Sobic009G043000--Sobic008G102000 Sobic001G102800 Sobic001G102800 Sobic009G043000--Sobic001G102800 Sobic009G043000--Sobic007G225500 Sobic004G272100 Sobic004G272100 Sobic009G043000--Sobic004G272100 Sobic006G207800 Sobic006G207800 Sobic009G043000--Sobic006G207800 Sobic009G140600 Sobic009G140600 Sobic009G043000--Sobic009G140600 Sobic001G519800 Sobic001G519800 Sobic009G043000--Sobic001G519800 Sobic010G095000--Sobic001G076900 Sobic003G234400 Sobic003G234400 Sobic010G095000--Sobic003G234400 Sobic006G008700 Sobic006G008700 Sobic010G095000--Sobic006G008700 Sobic010G095000--Sobic005G056400 Sobic010G153900 Sobic010G153900 Sobic010G095000--Sobic010G153900 Sobic010G095000--Sobic004G305800 Sobic010G095000--Sobic010G201700 Sobic004G125700 Sobic004G125700 Sobic010G095000--Sobic004G125700 Sobic010G095000--Sobic005G200200 Sobic003G002300--Sobic007G052400 Sobic003G002300--Sobic007G225500 Sobic003G002300--Sobic009G140600 Sobic003G002300--Sobic009G043000 Sobic003G002300--Sobic008G102000 Sobic002G051100 Sobic002G051100 Sobic003G002300--Sobic002G051100 Sobic003G002300--Sobic010G201700 Sobic003G002300--Sobic001G519800 Sobic003G002300--Sobic010G005500
Octagon: transcription factors


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