Gene annotation
Transcriptome id Sobic.006G067400.1
Synonym
Functional annotation Ser/Thr protein phosphatase family protein, putative, expressed
UniProt A0A1B6PKM3
Pfam PF00149
Panther DB PTHR24032
NCBI CDD KOG0374; Serine/threonine specific protein phosphatase PP1, catalytic subunit
KEGG Orthology -
Gene Ontology GO:0016787; hydrolase activity


Orthologs (automatic annotation)
TAIR AT3G09970 : Calcineurin-like metallo-phosphoesterase superfamily protein
RAP-DB (Rice) LOC_Os04g33470.1 : Ser/Thr protein phosphatase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a011553 , Zm00025a052564 , Zm00025a055990
Brachypodium KQJ82481
Barley HORVU2Hr1G072530.1 , HORVU2Hr1G072530.3 , HORVU2Hr1G072530.2
Wheat TraesCS2B02G309600 , TraesCS2A02G293300 , TraesCS2D02G290900 , TraesCS2D02G290900
Populus -


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cDNA sequences
Sobic.006G067400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G188600 glyoxalase family protein, putative, expressed -
2 Sobic.008G171300 methyltransferase domain containing protein, putative, expressed K12502: VTE3, MPBQ/MSBQ methyltransferase
3 Sobic.009G059300 haloacid dehalogenase-like hydrolase family protein, putative, expressed -
4 Sobic.009G043000 thioredoxin, putative, expressed -
5 Sobic.001G314200 expressed protein -
6 Sobic.007G052400 rubredoxin family protein, putative, expressed -
7 Sobic.009G210200 Acid phosphatase/vanadium-dependent haloperoxidase-related protein(PubMedID : 26465154)@Divergent PAP2 family domain containing protein, expressed -
8 Sobic.009G030900 bundle sheath defective protein 2, putative, expressed -
9 Sobic.007G225500 expressed protein -
10 Sobic.010G005500 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase
11 Sobic.003G412900 NAD(P)H dehydrogenase 18(PubMedID : 26465154)@Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein -
12 Sobic.003G387100 membrane-associated 30 kDa protein, chloroplast precursor, putative, expressed K03969: phage shock protein A
13 Sobic.004G303200 cytochrome b561, putative, expressed K08360: cytochrome b-561
14 Sobic.010G160700 PEPC(PubMedID : 19549309)@"C4 PTPC , photosynthetic C4 gene"(PubMedID : 2308851)@phosphoenolpyruvate carboxylase 2(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@phosphoenolpyruvate carboxylase, putative, expressed K01595: phosphoenolpyruvate carboxylase
15 Sobic.008G102000 Chaperone DnaJ-domain superfamily protein(PubMedID : 26465154)@heat shock protein DnaJ, putative, expressed -
16 Sobic.006G077400 PAP fibrillin family domain containing protein, expressed -
17 Sobic.003G002300 Glucose-6-phosphate/phosphate translocator-related(PubMedID : 26465154)@-(PubMedID : 26976818)@triosephosphate/phosphate translocator(PubMedID : 27016024)@DUF250 domain containing protein, putative, expressed K15283: solute carrier family 35, member E1
18 Sobic.010G035400 expressed protein -
19 Sobic.006G207800 Plastid-lipid associated protein PAP / fibrillin family protein(PubMedID : 26465154)@PAP fibrillin family domain containing protein, expressed -
20 Sobic.002G272100 expressed protein -


Gene co-expression network
sample Sobic006G067400 Sobic006G067400 Sobic008G188600 Sobic008G188600 Sobic006G067400--Sobic008G188600 Sobic008G171300 Sobic008G171300 Sobic006G067400--Sobic008G171300 Sobic009G059300 Sobic009G059300 Sobic006G067400--Sobic009G059300 Sobic009G043000 Sobic009G043000 Sobic006G067400--Sobic009G043000 Sobic001G314200 Sobic001G314200 Sobic006G067400--Sobic001G314200 Sobic007G052400 Sobic007G052400 Sobic006G067400--Sobic007G052400 Sobic009G210200 Sobic009G210200 Sobic006G067400--Sobic009G210200 Sobic009G030900 Sobic009G030900 Sobic006G067400--Sobic009G030900 Sobic007G225500 Sobic007G225500 Sobic006G067400--Sobic007G225500 Sobic003G387100 Sobic003G387100 Sobic008G188600--Sobic003G387100 Sobic008G188600--Sobic009G043000 Sobic008G102000 Sobic008G102000 Sobic008G188600--Sobic008G102000 Sobic006G207800 Sobic006G207800 Sobic008G188600--Sobic006G207800 Sobic008G188600--Sobic009G059300 Sobic008G188600--Sobic006G067400 Sobic010G201700 Sobic010G201700 Sobic008G188600--Sobic010G201700 Sobic010G153900 Sobic010G153900 Sobic008G188600--Sobic010G153900 Sobic008G188600--Sobic007G225500 Sobic002G233700 Sobic002G233700 Sobic008G171300--Sobic002G233700 Sobic008G171300--Sobic007G052400 Sobic008G171300--Sobic007G225500 Sobic003G002300 Sobic003G002300 Sobic008G171300--Sobic003G002300 Sobic008G171300--Sobic008G102000 Sobic008G171300--Sobic009G059300 Sobic004G012900 Sobic004G012900 Sobic008G171300--Sobic004G012900 Sobic009G140600 Sobic009G140600 Sobic008G171300--Sobic009G140600 Sobic009G183700 Sobic009G183700 Sobic008G171300--Sobic009G183700 Sobic009G059300--Sobic003G387100 Sobic009G059300--Sobic004G012900 Sobic010G005500 Sobic010G005500 Sobic009G059300--Sobic010G005500 Sobic009G059300--Sobic006G207800 Sobic009G059300--Sobic008G171300 Sobic001G309300 Sobic001G309300 Sobic009G059300--Sobic001G309300 Sobic009G059300--Sobic007G052400 Sobic009G059300--Sobic009G030900 Sobic008G073100 Sobic008G073100 Sobic009G059300--Sobic008G073100 Sobic009G043000--Sobic010G201700 Sobic009G043000--Sobic003G002300 Sobic009G043000--Sobic008G102000 Sobic001G102800 Sobic001G102800 Sobic009G043000--Sobic001G102800 Sobic009G043000--Sobic007G225500 Sobic004G272100 Sobic004G272100 Sobic009G043000--Sobic004G272100 Sobic009G043000--Sobic006G207800 Sobic009G043000--Sobic009G140600 Sobic001G519800 Sobic001G519800 Sobic009G043000--Sobic001G519800 Sobic003G412900 Sobic003G412900 Sobic001G314200--Sobic003G412900 Sobic001G314200--Sobic009G030900 Sobic001G069000 Sobic001G069000 Sobic001G314200--Sobic001G069000 Sobic001G314200--Sobic006G067400 Sobic001G314200--Sobic003G387100 Sobic006G093900 Sobic006G093900 Sobic001G314200--Sobic006G093900 Sobic001G314200--Sobic009G059300 Sobic001G314200--Sobic008G171300 Sobic001G314200--Sobic008G188600 Sobic007G052400--Sobic010G005500 Sobic007G052400--Sobic003G002300 Sobic007G052400--Sobic004G012900 Sobic007G052400--Sobic008G171300 Sobic007G052400--Sobic007G225500 Sobic007G052400--Sobic009G183700 Sobic007G052400--Sobic009G030900 Sobic007G052400--Sobic008G102000 Sobic007G052400--Sobic002G233700 Sobic008G064500 Sobic008G064500 Sobic009G210200--Sobic008G064500 Sobic004G303200 Sobic004G303200 Sobic009G210200--Sobic004G303200 Sobic004G020300 Sobic004G020300 Sobic009G210200--Sobic004G020300 Sobic009G210200--Sobic006G067400 Sobic010G160700 Sobic010G160700 Sobic009G210200--Sobic010G160700 Sobic009G210200--Sobic008G171300 Sobic009G210200--Sobic002G233700 Sobic006G235350 Sobic006G235350 Sobic009G210200--Sobic006G235350 Sobic002G272100 Sobic002G272100 Sobic009G210200--Sobic002G272100 Sobic009G030900--Sobic010G005500 Sobic010G277600 Sobic010G277600 Sobic009G030900--Sobic010G277600 Sobic009G030900--Sobic007G052400 Sobic009G030900--Sobic009G183700 Sobic003G387800 Sobic003G387800 Sobic009G030900--Sobic003G387800 Sobic009G030900--Sobic009G059300 Sobic009G030900--Sobic003G002300 Sobic009G030900--Sobic008G171300 Sobic004G175500 Sobic004G175500 Sobic009G030900--Sobic004G175500 Sobic007G225500--Sobic003G002300 Sobic010G035400 Sobic010G035400 Sobic007G225500--Sobic010G035400 Sobic007G225500--Sobic008G102000 Sobic007G225500--Sobic007G052400 Sobic007G225500--Sobic008G171300 Sobic007G225500--Sobic009G043000 Sobic002G275300 Sobic002G275300 Sobic007G225500--Sobic002G275300 Sobic006G077400 Sobic006G077400 Sobic007G225500--Sobic006G077400 Sobic007G225500--Sobic010G201700
Octagon: transcription factors


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