Gene annotation
Transcriptome id Sobic.008G171300.1
Synonym Sb08g021610, E37, IEP37, VTE3, APG1
Functional annotation methyltransferase domain containing protein, putative, expressed
UniProt C5YS19
Pfam PF08241
Panther DB PTHR10108 PTHR10108:SF904
NCBI CDD KOG1540; Ubiquinone biosynthesis methyltransferase COQ5
KEGG Orthology K12502; VTE3, MPBQ/MSBQ methyltransferase
Gene Ontology GO:0008168; methyltransferase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT3G63410 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os12g42090.2 : methyltransferase domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a004703
Brachypodium KQJ93489 , KQJ85779
Barley HORVU6Hr1G060690.12 , HORVU6Hr1G060690.11 , HORVU6Hr1G060690.3 , HORVU6Hr1G060690.2 , HORVU5Hr1G008980.15 , HORVU5Hr1G008980.17 , HORVU5Hr1G008980.21 , HORVU5Hr1G008980.6 , HORVU5Hr1G008980.7 , HORVU5Hr1G008980.4 , HORVU5Hr1G008980.5 , HORVU5Hr1G008980.2 , HORVU5Hr1G008980.3 , HORVU5Hr1G008980.8 , HORVU6Hr1G060690.7 , HORVU6Hr1G060690.6 , HORVU6Hr1G060690.4 , HORVU6Hr1G060690.9
Wheat TraesCS6B02G265600 , TraesCS4A02G301600 , TraesCS4A02G301600 , TraesCS6D02G219700 , TraesCS5D02G043300 , TraesCS5A02G035100 , TraesCS6A02G237100 , TraesCS5B02G035200
Populus -


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cDNA sequences
Sobic.008G171300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G233700 -(PubMedID : 26976818)@dicarboxylate transporter 2(PubMedID : 27016024)@citrate transporter, putative, expressed K03319: divalent anion:Na+ symporter, DASS family
2 Sobic.007G052400 rubredoxin family protein, putative, expressed -
3 Sobic.007G225500 expressed protein -
4 Sobic.003G002300 Glucose-6-phosphate/phosphate translocator-related(PubMedID : 26465154)@-(PubMedID : 26976818)@triosephosphate/phosphate translocator(PubMedID : 27016024)@DUF250 domain containing protein, putative, expressed K15283: solute carrier family 35, member E1
5 Sobic.008G102000 Chaperone DnaJ-domain superfamily protein(PubMedID : 26465154)@heat shock protein DnaJ, putative, expressed -
6 Sobic.009G059300 haloacid dehalogenase-like hydrolase family protein, putative, expressed -
7 Sobic.004G012900 expressed protein -
8 Sobic.009G140600 hydrolase, alpha/beta fold family domain containing protein, expressed -
9 Sobic.009G183700 XP_002441313.1 plastidic phosphoglycerate kinase(PubMedID : 26904072)@phosphoglycerate kinase(PubMedID : 29017446)@phosphoglycerate kinase protein, putative, expressed K00927: PGK, phosphoglycerate kinase
10 Sobic.009G030900 bundle sheath defective protein 2, putative, expressed -
11 Sobic.010G005500 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase
12 Sobic.005G194100 expressed protein -
13 Sobic.003G387100 membrane-associated 30 kDa protein, chloroplast precursor, putative, expressed K03969: phage shock protein A
14 Sobic.009G043000 thioredoxin, putative, expressed -
15 Sobic.008G172700 OsDegp15 - Putative Deg protease homologue, expressed -
16 Sobic.010G277600 - -
17 Sobic.003G378600 "oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor"(PubMedID : 26465154)@NADH dehydrogenase I subunit N, putative, expressed -
18 Sobic.004G303200 cytochrome b561, putative, expressed K08360: cytochrome b-561
19 Sobic.006G067400 Ser/Thr protein phosphatase family protein, putative, expressed -
20 Sobic.002G272100 expressed protein -


Gene co-expression network
sample Sobic008G171300 Sobic008G171300 Sobic002G233700 Sobic002G233700 Sobic008G171300--Sobic002G233700 Sobic007G052400 Sobic007G052400 Sobic008G171300--Sobic007G052400 Sobic007G225500 Sobic007G225500 Sobic008G171300--Sobic007G225500 Sobic003G002300 Sobic003G002300 Sobic008G171300--Sobic003G002300 Sobic008G102000 Sobic008G102000 Sobic008G171300--Sobic008G102000 Sobic009G059300 Sobic009G059300 Sobic008G171300--Sobic009G059300 Sobic004G012900 Sobic004G012900 Sobic008G171300--Sobic004G012900 Sobic009G140600 Sobic009G140600 Sobic008G171300--Sobic009G140600 Sobic009G183700 Sobic009G183700 Sobic008G171300--Sobic009G183700 Sobic002G233700--Sobic008G171300 Sobic002G233700--Sobic004G012900 Sobic004G303200 Sobic004G303200 Sobic002G233700--Sobic004G303200 Sobic002G233700--Sobic007G052400 Sobic002G233700--Sobic007G225500 Sobic001G005200 Sobic001G005200 Sobic002G233700--Sobic001G005200 Sobic002G233700--Sobic003G002300 Sobic002G401800 Sobic002G401800 Sobic002G233700--Sobic002G401800 Sobic003G378600 Sobic003G378600 Sobic002G233700--Sobic003G378600 Sobic010G005500 Sobic010G005500 Sobic007G052400--Sobic010G005500 Sobic007G052400--Sobic003G002300 Sobic007G052400--Sobic004G012900 Sobic007G052400--Sobic008G171300 Sobic007G052400--Sobic007G225500 Sobic007G052400--Sobic009G183700 Sobic009G030900 Sobic009G030900 Sobic007G052400--Sobic009G030900 Sobic007G052400--Sobic008G102000 Sobic007G052400--Sobic002G233700 Sobic007G225500--Sobic003G002300 Sobic010G035400 Sobic010G035400 Sobic007G225500--Sobic010G035400 Sobic007G225500--Sobic008G102000 Sobic007G225500--Sobic007G052400 Sobic007G225500--Sobic008G171300 Sobic009G043000 Sobic009G043000 Sobic007G225500--Sobic009G043000 Sobic002G275300 Sobic002G275300 Sobic007G225500--Sobic002G275300 Sobic006G077400 Sobic006G077400 Sobic007G225500--Sobic006G077400 Sobic010G201700 Sobic010G201700 Sobic007G225500--Sobic010G201700 Sobic003G002300--Sobic007G052400 Sobic003G002300--Sobic007G225500 Sobic003G002300--Sobic009G140600 Sobic003G002300--Sobic009G043000 Sobic003G002300--Sobic008G102000 Sobic002G051100 Sobic002G051100 Sobic003G002300--Sobic002G051100 Sobic003G002300--Sobic010G201700 Sobic001G519800 Sobic001G519800 Sobic003G002300--Sobic001G519800 Sobic003G002300--Sobic010G005500 Sobic008G102000--Sobic003G002300 Sobic008G102000--Sobic009G140600 Sobic008G102000--Sobic009G043000 Sobic008G102000--Sobic007G225500 Sobic008G102000--Sobic002G051100 Sobic004G272100 Sobic004G272100 Sobic008G102000--Sobic004G272100 Sobic007G173800 Sobic007G173800 Sobic008G102000--Sobic007G173800 Sobic008G102000--Sobic007G052400 Sobic008G102000--Sobic003G378600 Sobic003G387100 Sobic003G387100 Sobic009G059300--Sobic003G387100 Sobic009G059300--Sobic004G012900 Sobic009G059300--Sobic010G005500 Sobic006G207800 Sobic006G207800 Sobic009G059300--Sobic006G207800 Sobic009G059300--Sobic008G171300 Sobic001G309300 Sobic001G309300 Sobic009G059300--Sobic001G309300 Sobic009G059300--Sobic007G052400 Sobic009G059300--Sobic009G030900 Sobic008G073100 Sobic008G073100 Sobic009G059300--Sobic008G073100 Sobic004G012900--Sobic007G052400 Sobic004G012900--Sobic002G233700 Sobic004G012900--Sobic002G401800 Sobic004G012900--Sobic010G005500 Sobic004G012900--Sobic003G378600 Sobic004G012900--Sobic009G059300 Sobic010G277600 Sobic010G277600 Sobic004G012900--Sobic010G277600 Sobic004G012900--Sobic003G387100 Sobic004G012900--Sobic008G171300 Sobic009G140600--Sobic003G002300 Sobic009G140600--Sobic008G102000 Sobic009G140600--Sobic003G378600 Sobic003G387800 Sobic003G387800 Sobic009G140600--Sobic003G387800 Sobic001G122300 Sobic001G122300 Sobic009G140600--Sobic001G122300 Sobic005G194100 Sobic005G194100 Sobic009G140600--Sobic005G194100 Sobic009G140600--Sobic007G052400 Sobic009G140600--Sobic001G005200 Sobic009G140600--Sobic009G043000 Sobic009G183700--Sobic010G277600 Sobic002G277100 Sobic002G277100 Sobic009G183700--Sobic002G277100 Sobic009G183700--Sobic010G005500 Sobic009G183700--Sobic003G002300 Sobic009G183700--Sobic007G052400 Sobic007G004600 Sobic007G004600 Sobic009G183700--Sobic007G004600 Sobic009G183700--Sobic009G030900 Sobic009G183700--Sobic003G387800 Sobic009G183700--Sobic009G140600
Octagon: transcription factors


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