Gene annotation
| Transcriptome id | Sobic.008G102000.1 |
|---|---|
| Synonym | Sb08g015440 |
| Functional annotation | Chaperone DnaJ-domain superfamily protein (PubMedID : 26465154) heat shock protein DnaJ, putative, expressed |
| UniProt | C5YNV7 |
| Pfam | PF00226 |
| Panther DB | - |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | AT5G21430 : Chaperone DnaJ-domain superfamily protein |
|---|---|
| RAP-DB (Rice) | LOC_Os12g31460.1 : heat shock protein DnaJ, putative, expressed |
| MaizeGDB (Corn) | Zm00025a054228 |
| Brachypodium | KQJ86661 |
| Barley | - |
| Wheat | TraesCS5A02G108400 , TraesCS5D02G117100 , TraesCS5B02G114900 , TraesCS5B02G114900 , TraesCS5A02G108400 |
| Populus | - |
JBrowse
| Sobic.008G102000 |
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.003G002300 | Glucose-6-phosphate/phosphate translocator-related(PubMedID : 26465154)@-(PubMedID : 26976818)@triosephosphate/phosphate translocator(PubMedID : 27016024)@DUF250 domain containing protein, putative, expressed | K15283: solute carrier family 35, member E1 |
| 2 | Sobic.009G140600 | hydrolase, alpha/beta fold family domain containing protein, expressed | - |
| 3 | Sobic.009G043000 | thioredoxin, putative, expressed | - |
| 4 | Sobic.007G225500 | expressed protein | - |
| 5 | Sobic.002G051100 | Probable ribose-5-phosphate isomerase(PubMedID : 26186930)@ribose-5-phosphate isomerase A, putative, expressed | K01807: ribose 5-phosphate isomerase A |
| 6 | Sobic.004G272100 | phosphoribulokinase/Uridine kinase family protein, expressed | K00855: PRK, phosphoribulokinase |
| 7 | Sobic.007G173800 | uncharacterized protein ycf39, putative, expressed | - |
| 8 | Sobic.007G052400 | rubredoxin family protein, putative, expressed | - |
| 9 | Sobic.003G378600 | "oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor"(PubMedID : 26465154)@NADH dehydrogenase I subunit N, putative, expressed | - |
| 10 | Sobic.001G005200 | expressed protein | - |
| 11 | Sobic.010G201700 | GA16396-PA, putative, expressed | - |
| 12 | Sobic.008G171300 | methyltransferase domain containing protein, putative, expressed | K12502: VTE3, MPBQ/MSBQ methyltransferase |
| 13 | Sobic.005G194100 | expressed protein | - |
| 14 | Sobic.004G359600 | cell division inhibitor, putative, expressed | K07071: uncharacterized protein |
| 15 | Sobic.003G387800 | unknown(PubMedID : 29017446)@rhodanese-like domain containing protein, putative, expressed | - |
| 16 | Sobic.010G160700 | PEPC(PubMedID : 19549309)@"C4 PTPC , photosynthetic C4 gene"(PubMedID : 2308851)@phosphoenolpyruvate carboxylase 2(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@phosphoenolpyruvate carboxylase, putative, expressed | K01595: phosphoenolpyruvate carboxylase |
| 17 | Sobic.004G239100 | -(PubMedID : 26465154)@expressed protein | - |
| 18 | Sobic.009G183700 | XP_002441313.1 plastidic phosphoglycerate kinase(PubMedID : 26904072)@phosphoglycerate kinase(PubMedID : 29017446)@phosphoglycerate kinase protein, putative, expressed | K00927: PGK, phosphoglycerate kinase |
| 19 | Sobic.003G412900 | NAD(P)H dehydrogenase 18(PubMedID : 26465154)@Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein | - |
| 20 | Sobic.008G188600 | glyoxalase family protein, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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