Gene annotation
Transcriptome id Sobic.004G239100.1
Synonym Sb04g028110, NDF6
Functional annotation - (PubMedID : 26465154)
expressed protein
UniProt C5XYU2
Pfam -
Panther DB PTHR36315 PTHR36315:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G18730 : NDH dependent flow 6
RAP-DB (Rice) LOC_Os02g51020.1 : expressed protein
MaizeGDB (Corn) Zm00025a022025
Brachypodium KQK01955 , KQK01956
Barley HORVU6Hr1G076040.1 , HORVU6Hr1G076040.2
Wheat TraesCS6B02G336800 , TraesCS6A02G308100 , TraesCS6D02G287300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G277600 - -
2 Sobic.009G183700 XP_002441313.1 plastidic phosphoglycerate kinase(PubMedID : 26904072)@phosphoglycerate kinase(PubMedID : 29017446)@phosphoglycerate kinase protein, putative, expressed K00927: PGK, phosphoglycerate kinase
3 Sobic.008G172700 OsDegp15 - Putative Deg protease homologue, expressed -
4 Sobic.005G194100 expressed protein -
5 Sobic.003G378600 "oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor"(PubMedID : 26465154)@NADH dehydrogenase I subunit N, putative, expressed -
6 Sobic.008G102000 Chaperone DnaJ-domain superfamily protein(PubMedID : 26465154)@heat shock protein DnaJ, putative, expressed -
7 Sobic.009G030900 bundle sheath defective protein 2, putative, expressed -
8 Sobic.009G140600 hydrolase, alpha/beta fold family domain containing protein, expressed -
9 Sobic.002G198600 -(PubMedID : 29017446)@expressed protein -
10 Sobic.005G123200 cbbY, putative, expressed -
11 Sobic.001G405700 - -
12 Sobic.009G143100 cytochrome b6-f complex iron-sulfur subunit, chloroplast precursor, putative, expressed K02636: cytochrome b6-f complex iron-sulfur subunit
13 Sobic.008G171300 methyltransferase domain containing protein, putative, expressed K12502: VTE3, MPBQ/MSBQ methyltransferase
14 Sobic.003G387800 unknown(PubMedID : 29017446)@rhodanese-like domain containing protein, putative, expressed -
15 Sobic.004G012900 expressed protein -
16 Sobic.004G359600 cell division inhibitor, putative, expressed K07071: uncharacterized protein
17 Sobic.003G371600 proton-dependent oligopeptide transport, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
18 Sobic.007G052400 rubredoxin family protein, putative, expressed -
19 Sobic.003G412900 NAD(P)H dehydrogenase 18(PubMedID : 26465154)@Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein -
20 Sobic.007G004600 Ferredoxin-1(PubMedID : 26186930)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K02639: ferredoxin


Gene co-expression network
sample Sobic004G239100 Sobic004G239100 Sobic010G277600 Sobic010G277600 Sobic004G239100--Sobic010G277600 Sobic009G183700 Sobic009G183700 Sobic004G239100--Sobic009G183700 Sobic008G172700 Sobic008G172700 Sobic004G239100--Sobic008G172700 Sobic005G194100 Sobic005G194100 Sobic004G239100--Sobic005G194100 Sobic003G378600 Sobic003G378600 Sobic004G239100--Sobic003G378600 Sobic008G102000 Sobic008G102000 Sobic004G239100--Sobic008G102000 Sobic009G030900 Sobic009G030900 Sobic004G239100--Sobic009G030900 Sobic009G140600 Sobic009G140600 Sobic004G239100--Sobic009G140600 Sobic002G198600 Sobic002G198600 Sobic004G239100--Sobic002G198600 Sobic010G277600--Sobic009G183700 Sobic010G277600--Sobic009G030900 Sobic010G005500 Sobic010G005500 Sobic010G277600--Sobic010G005500 Sobic007G052400 Sobic007G052400 Sobic010G277600--Sobic007G052400 Sobic010G277600--Sobic004G239100 Sobic004G012900 Sobic004G012900 Sobic010G277600--Sobic004G012900 Sobic002G277100 Sobic002G277100 Sobic010G277600--Sobic002G277100 Sobic007G004600 Sobic007G004600 Sobic010G277600--Sobic007G004600 Sobic007G173800 Sobic007G173800 Sobic010G277600--Sobic007G173800 Sobic009G183700--Sobic010G277600 Sobic009G183700--Sobic002G277100 Sobic009G183700--Sobic010G005500 Sobic003G002300 Sobic003G002300 Sobic009G183700--Sobic003G002300 Sobic009G183700--Sobic007G052400 Sobic009G183700--Sobic007G004600 Sobic009G183700--Sobic009G030900 Sobic003G387800 Sobic003G387800 Sobic009G183700--Sobic003G387800 Sobic009G183700--Sobic009G140600 Sobic002G267900 Sobic002G267900 Sobic008G172700--Sobic002G267900 Sobic001G350000 Sobic001G350000 Sobic008G172700--Sobic001G350000 Sobic008G172700--Sobic004G239100 Sobic004G055000 Sobic004G055000 Sobic008G172700--Sobic004G055000 Sobic008G172700--Sobic003G378600 Sobic008G172700--Sobic010G277600 Sobic008G172700--Sobic009G183700 Sobic008G171300 Sobic008G171300 Sobic008G172700--Sobic008G171300 Sobic004G359600 Sobic004G359600 Sobic008G172700--Sobic004G359600 Sobic005G194100--Sobic009G140600 Sobic005G194100--Sobic008G102000 Sobic005G194100--Sobic009G183700 Sobic010G160700 Sobic010G160700 Sobic005G194100--Sobic010G160700 Sobic005G194100--Sobic004G239100 Sobic005G194100--Sobic008G171300 Sobic001G489000 Sobic001G489000 Sobic005G194100--Sobic001G489000 Sobic005G194100--Sobic003G387800 Sobic005G194100--Sobic009G030900 Sobic003G378600--Sobic009G140600 Sobic001G005200 Sobic001G005200 Sobic003G378600--Sobic001G005200 Sobic003G378600--Sobic004G012900 Sobic003G378600--Sobic008G102000 Sobic001G122300 Sobic001G122300 Sobic003G378600--Sobic001G122300 Sobic003G378600--Sobic004G239100 Sobic003G378600--Sobic004G359600 Sobic002G233700 Sobic002G233700 Sobic003G378600--Sobic002G233700 Sobic003G378600--Sobic008G172700 Sobic008G102000--Sobic003G002300 Sobic008G102000--Sobic009G140600 Sobic009G043000 Sobic009G043000 Sobic008G102000--Sobic009G043000 Sobic007G225500 Sobic007G225500 Sobic008G102000--Sobic007G225500 Sobic002G051100 Sobic002G051100 Sobic008G102000--Sobic002G051100 Sobic004G272100 Sobic004G272100 Sobic008G102000--Sobic004G272100 Sobic008G102000--Sobic007G173800 Sobic008G102000--Sobic007G052400 Sobic008G102000--Sobic003G378600 Sobic009G030900--Sobic010G005500 Sobic009G030900--Sobic010G277600 Sobic009G030900--Sobic007G052400 Sobic009G030900--Sobic009G183700 Sobic009G030900--Sobic003G387800 Sobic009G059300 Sobic009G059300 Sobic009G030900--Sobic009G059300 Sobic009G030900--Sobic003G002300 Sobic009G030900--Sobic008G171300 Sobic004G175500 Sobic004G175500 Sobic009G030900--Sobic004G175500 Sobic009G140600--Sobic003G002300 Sobic009G140600--Sobic008G102000 Sobic009G140600--Sobic003G378600 Sobic009G140600--Sobic003G387800 Sobic009G140600--Sobic001G122300 Sobic009G140600--Sobic005G194100 Sobic009G140600--Sobic007G052400 Sobic009G140600--Sobic001G005200 Sobic009G140600--Sobic009G043000 Sobic003G433900 Sobic003G433900 Sobic002G198600--Sobic003G433900 Sobic002G198600--Sobic004G175500 Sobic009G091800 Sobic009G091800 Sobic002G198600--Sobic009G091800 Sobic003G132100 Sobic003G132100 Sobic002G198600--Sobic003G132100 Sobic003G386300 Sobic003G386300 Sobic002G198600--Sobic003G386300 Sobic002G198600--Sobic009G030900 Sobic006G248200 Sobic006G248200 Sobic002G198600--Sobic006G248200 Sobic010G011800 Sobic010G011800 Sobic002G198600--Sobic010G011800 Sobic004G311100 Sobic004G311100 Sobic002G198600--Sobic004G311100
Octagon: transcription factors


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