Gene annotation
Transcriptome id Sobic.007G052400.3,Sobic.007G052400.4,Sobic.007G052400.2
Synonym ENH1, Sb07g004240
Functional annotation rubredoxin family protein, putative, expressed
UniProt A0A1Z5R871 , A0A1Z5R987
Pfam -
Panther DB PTHR17130
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G17170 : rubredoxin family protein
RAP-DB (Rice) LOC_Os08g06530.1 : rubredoxin family protein, putative, expressed
MaizeGDB (Corn) Zm00025a055085
Brachypodium -
Barley HORVU7Hr1G067110.4 , HORVU7Hr1G067110.5 , HORVU7Hr1G067110.6 , HORVU7Hr1G067110.7 , HORVU7Hr1G067110.1 , HORVU7Hr1G067110.2 , HORVU7Hr1G067110.3
Wheat TraesCS7B02G189500 , TraesCS7B02G189500 , TraesCS7A02G294700 , TraesCS7D02G293100
Populus -


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cDNA sequences
Sobic.007G052400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G005500 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase
2 Sobic.003G002300 Glucose-6-phosphate/phosphate translocator-related(PubMedID : 26465154)@-(PubMedID : 26976818)@triosephosphate/phosphate translocator(PubMedID : 27016024)@DUF250 domain containing protein, putative, expressed K15283: solute carrier family 35, member E1
3 Sobic.004G012900 expressed protein -
4 Sobic.008G171300 methyltransferase domain containing protein, putative, expressed K12502: VTE3, MPBQ/MSBQ methyltransferase
5 Sobic.007G225500 expressed protein -
6 Sobic.009G183700 XP_002441313.1 plastidic phosphoglycerate kinase(PubMedID : 26904072)@phosphoglycerate kinase(PubMedID : 29017446)@phosphoglycerate kinase protein, putative, expressed K00927: PGK, phosphoglycerate kinase
7 Sobic.009G030900 bundle sheath defective protein 2, putative, expressed -
8 Sobic.008G102000 Chaperone DnaJ-domain superfamily protein(PubMedID : 26465154)@heat shock protein DnaJ, putative, expressed -
9 Sobic.002G233700 -(PubMedID : 26976818)@dicarboxylate transporter 2(PubMedID : 27016024)@citrate transporter, putative, expressed K03319: divalent anion:Na+ symporter, DASS family
10 Sobic.010G277600 - -
11 Sobic.010G160700 PEPC(PubMedID : 19549309)@"C4 PTPC , photosynthetic C4 gene"(PubMedID : 2308851)@phosphoenolpyruvate carboxylase 2(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@phosphoenolpyruvate carboxylase, putative, expressed K01595: phosphoenolpyruvate carboxylase
12 Sobic.003G387800 unknown(PubMedID : 29017446)@rhodanese-like domain containing protein, putative, expressed -
13 Sobic.009G140600 hydrolase, alpha/beta fold family domain containing protein, expressed -
14 Sobic.009G043000 thioredoxin, putative, expressed -
15 Sobic.002G277100 -(PubMedID : 29017446)@triosephosphate isomerase, chloroplast precursor, putative, expressed K01803: TPI, triosephosphate isomerase (TIM)
16 Sobic.003G387100 membrane-associated 30 kDa protein, chloroplast precursor, putative, expressed K03969: phage shock protein A
17 Sobic.001G102800 expressed protein -
18 Sobic.009G059300 haloacid dehalogenase-like hydrolase family protein, putative, expressed -
19 Sobic.007G004800 Ferredoxin-1(PubMedID : 26186930)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K02639: ferredoxin
20 Sobic.002G401800 bifunctional thioredoxin reductase/thioredoxin, putative, expressed K00384: trxB, thioredoxin reductase (NADPH)


Gene co-expression network
sample Sobic007G052400 Sobic007G052400 Sobic010G005500 Sobic010G005500 Sobic007G052400--Sobic010G005500 Sobic003G002300 Sobic003G002300 Sobic007G052400--Sobic003G002300 Sobic004G012900 Sobic004G012900 Sobic007G052400--Sobic004G012900 Sobic008G171300 Sobic008G171300 Sobic007G052400--Sobic008G171300 Sobic007G225500 Sobic007G225500 Sobic007G052400--Sobic007G225500 Sobic009G183700 Sobic009G183700 Sobic007G052400--Sobic009G183700 Sobic009G030900 Sobic009G030900 Sobic007G052400--Sobic009G030900 Sobic008G102000 Sobic008G102000 Sobic007G052400--Sobic008G102000 Sobic002G233700 Sobic002G233700 Sobic007G052400--Sobic002G233700 Sobic010G005500--Sobic007G052400 Sobic010G005500--Sobic003G002300 Sobic010G005500--Sobic009G030900 Sobic010G005500--Sobic009G183700 Sobic002G277100 Sobic002G277100 Sobic010G005500--Sobic002G277100 Sobic003G387800 Sobic003G387800 Sobic010G005500--Sobic003G387800 Sobic010G005500--Sobic004G012900 Sobic010G277600 Sobic010G277600 Sobic010G005500--Sobic010G277600 Sobic009G059300 Sobic009G059300 Sobic010G005500--Sobic009G059300 Sobic003G002300--Sobic007G052400 Sobic003G002300--Sobic007G225500 Sobic009G140600 Sobic009G140600 Sobic003G002300--Sobic009G140600 Sobic009G043000 Sobic009G043000 Sobic003G002300--Sobic009G043000 Sobic003G002300--Sobic008G102000 Sobic002G051100 Sobic002G051100 Sobic003G002300--Sobic002G051100 Sobic010G201700 Sobic010G201700 Sobic003G002300--Sobic010G201700 Sobic001G519800 Sobic001G519800 Sobic003G002300--Sobic001G519800 Sobic003G002300--Sobic010G005500 Sobic004G012900--Sobic007G052400 Sobic004G012900--Sobic002G233700 Sobic002G401800 Sobic002G401800 Sobic004G012900--Sobic002G401800 Sobic004G012900--Sobic010G005500 Sobic003G378600 Sobic003G378600 Sobic004G012900--Sobic003G378600 Sobic004G012900--Sobic009G059300 Sobic004G012900--Sobic010G277600 Sobic003G387100 Sobic003G387100 Sobic004G012900--Sobic003G387100 Sobic004G012900--Sobic008G171300 Sobic008G171300--Sobic002G233700 Sobic008G171300--Sobic007G052400 Sobic008G171300--Sobic007G225500 Sobic008G171300--Sobic003G002300 Sobic008G171300--Sobic008G102000 Sobic008G171300--Sobic009G059300 Sobic008G171300--Sobic004G012900 Sobic008G171300--Sobic009G140600 Sobic008G171300--Sobic009G183700 Sobic007G225500--Sobic003G002300 Sobic010G035400 Sobic010G035400 Sobic007G225500--Sobic010G035400 Sobic007G225500--Sobic008G102000 Sobic007G225500--Sobic007G052400 Sobic007G225500--Sobic008G171300 Sobic007G225500--Sobic009G043000 Sobic002G275300 Sobic002G275300 Sobic007G225500--Sobic002G275300 Sobic006G077400 Sobic006G077400 Sobic007G225500--Sobic006G077400 Sobic007G225500--Sobic010G201700 Sobic009G183700--Sobic010G277600 Sobic009G183700--Sobic002G277100 Sobic009G183700--Sobic010G005500 Sobic009G183700--Sobic003G002300 Sobic009G183700--Sobic007G052400 Sobic007G004600 Sobic007G004600 Sobic009G183700--Sobic007G004600 Sobic009G183700--Sobic009G030900 Sobic009G183700--Sobic003G387800 Sobic009G183700--Sobic009G140600 Sobic009G030900--Sobic010G005500 Sobic009G030900--Sobic010G277600 Sobic009G030900--Sobic007G052400 Sobic009G030900--Sobic009G183700 Sobic009G030900--Sobic003G387800 Sobic009G030900--Sobic009G059300 Sobic009G030900--Sobic003G002300 Sobic009G030900--Sobic008G171300 Sobic004G175500 Sobic004G175500 Sobic009G030900--Sobic004G175500 Sobic008G102000--Sobic003G002300 Sobic008G102000--Sobic009G140600 Sobic008G102000--Sobic009G043000 Sobic008G102000--Sobic007G225500 Sobic008G102000--Sobic002G051100 Sobic004G272100 Sobic004G272100 Sobic008G102000--Sobic004G272100 Sobic007G173800 Sobic007G173800 Sobic008G102000--Sobic007G173800 Sobic008G102000--Sobic007G052400 Sobic008G102000--Sobic003G378600 Sobic002G233700--Sobic008G171300 Sobic002G233700--Sobic004G012900 Sobic004G303200 Sobic004G303200 Sobic002G233700--Sobic004G303200 Sobic002G233700--Sobic007G052400 Sobic002G233700--Sobic007G225500 Sobic001G005200 Sobic001G005200 Sobic002G233700--Sobic001G005200 Sobic002G233700--Sobic003G002300 Sobic002G233700--Sobic002G401800 Sobic002G233700--Sobic003G378600
Octagon: transcription factors


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