Gene annotation
Transcriptome id Sobic.003G002300.2,Sobic.003G002300.1
Synonym APE2, TPT, Sb03g000370, TPT ;TPT, APE2
Functional annotation Glucose-6-phosphate/phosphate translocator-related (PubMedID : 26465154)
- (PubMedID : 26976818)
triosephosphate/phosphate translocator (PubMedID : 27016024)
DUF250 domain containing protein, putative, expressed
UniProt A0A1W0VV81 , C5XJI1 , A0A2U9QI28
Pfam PF03151
Panther DB PTHR11132 PTHR11132:SF102
NCBI CDD KOG1441; Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter
KEGG Orthology K15283; solute carrier family 35, member E1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G46110 : Glucose-6-phosphate/phosphate translocator-related
RAP-DB (Rice) LOC_Os01g13770.3,LOC_Os01g13770.1 : DUF250 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a050754 , Zm00025a036021 , Zm00025a022780
Brachypodium KQK06947 , KQK03516
Barley HORVU3Hr1G032490.12 , HORVU3Hr1G032490.11 , HORVU3Hr1G032490.10 , HORVU3Hr1G032490.9 , HORVU3Hr1G032490.8 , HORVU3Hr1G032490.3 , HORVU3Hr1G032490.2 , HORVU3Hr1G032490.1 , HORVU3Hr1G032490.7 , HORVU3Hr1G032490.6 , HORVU3Hr1G032490.5 , HORVU3Hr1G032490.4 , HORVU1Hr1G016360.9 , HORVU1Hr1G016360.8 , HORVU1Hr1G016360.1 , HORVU1Hr1G016360.3 , HORVU1Hr1G016360.2 , HORVU1Hr1G016360.5 , HORVU1Hr1G016360.6 , HORVU1Hr1G016360.20 , HORVU1Hr1G016360.21 , HORVU1Hr1G016360.22 , HORVU1Hr1G016360.23 , HORVU1Hr1G016360.19 , HORVU1Hr1G016360.18 , HORVU1Hr1G016360.15 , HORVU1Hr1G016360.17 , HORVU1Hr1G016360.16
Wheat TraesCS3D02G168600 , TraesCS1A02G075700 , TraesCS1D02G078000 , TraesCS1B02G094300 , TraesCS1B02G094300 , TraesCS1A02G075700 , TraesCS1A02G075700 , TraesCS3B02G192400 , TraesCS3B02G192400 , TraesCS3A02G161300
Populus PNT39613 , PNT39612 , PNT39611 , PNT11994 , PNT11995 , PNT11992 , PNT11993 , PNT11991


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cDNA sequences
Sobic.003G002300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G052400 rubredoxin family protein, putative, expressed -
2 Sobic.007G225500 expressed protein -
3 Sobic.009G140600 hydrolase, alpha/beta fold family domain containing protein, expressed -
4 Sobic.009G043000 thioredoxin, putative, expressed -
5 Sobic.008G102000 Chaperone DnaJ-domain superfamily protein(PubMedID : 26465154)@heat shock protein DnaJ, putative, expressed -
6 Sobic.002G051100 Probable ribose-5-phosphate isomerase(PubMedID : 26186930)@ribose-5-phosphate isomerase A, putative, expressed K01807: ribose 5-phosphate isomerase A
7 Sobic.010G201700 GA16396-PA, putative, expressed -
8 Sobic.001G519800 glyceraldehyde-3-phosphate dehydrogenase, putative, expressed K05298: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating)
9 Sobic.010G005500 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase
10 Sobic.010G160700 PEPC(PubMedID : 19549309)@"C4 PTPC , photosynthetic C4 gene"(PubMedID : 2308851)@phosphoenolpyruvate carboxylase 2(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@phosphoenolpyruvate carboxylase, putative, expressed K01595: phosphoenolpyruvate carboxylase
11 Sobic.001G102800 expressed protein -
12 Sobic.003G387800 unknown(PubMedID : 29017446)@rhodanese-like domain containing protein, putative, expressed -
13 Sobic.009G183700 XP_002441313.1 plastidic phosphoglycerate kinase(PubMedID : 26904072)@phosphoglycerate kinase(PubMedID : 29017446)@phosphoglycerate kinase protein, putative, expressed K00927: PGK, phosphoglycerate kinase
14 Sobic.004G272100 phosphoribulokinase/Uridine kinase family protein, expressed K00855: PRK, phosphoribulokinase
15 Sobic.008G171300 methyltransferase domain containing protein, putative, expressed K12502: VTE3, MPBQ/MSBQ methyltransferase
16 Sobic.002G277100 -(PubMedID : 29017446)@triosephosphate isomerase, chloroplast precursor, putative, expressed K01803: TPI, triosephosphate isomerase (TIM)
17 Sobic.007G004800 Ferredoxin-1(PubMedID : 26186930)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K02639: ferredoxin
18 Sobic.006G207800 Plastid-lipid associated protein PAP / fibrillin family protein(PubMedID : 26465154)@PAP fibrillin family domain containing protein, expressed -
19 Sobic.003G431700 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase
20 Sobic.004G012900 expressed protein -


Gene co-expression network
sample Sobic003G002300 Sobic003G002300 Sobic007G052400 Sobic007G052400 Sobic003G002300--Sobic007G052400 Sobic007G225500 Sobic007G225500 Sobic003G002300--Sobic007G225500 Sobic009G140600 Sobic009G140600 Sobic003G002300--Sobic009G140600 Sobic009G043000 Sobic009G043000 Sobic003G002300--Sobic009G043000 Sobic008G102000 Sobic008G102000 Sobic003G002300--Sobic008G102000 Sobic002G051100 Sobic002G051100 Sobic003G002300--Sobic002G051100 Sobic010G201700 Sobic010G201700 Sobic003G002300--Sobic010G201700 Sobic001G519800 Sobic001G519800 Sobic003G002300--Sobic001G519800 Sobic010G005500 Sobic010G005500 Sobic003G002300--Sobic010G005500 Sobic007G052400--Sobic010G005500 Sobic007G052400--Sobic003G002300 Sobic004G012900 Sobic004G012900 Sobic007G052400--Sobic004G012900 Sobic008G171300 Sobic008G171300 Sobic007G052400--Sobic008G171300 Sobic007G052400--Sobic007G225500 Sobic009G183700 Sobic009G183700 Sobic007G052400--Sobic009G183700 Sobic009G030900 Sobic009G030900 Sobic007G052400--Sobic009G030900 Sobic007G052400--Sobic008G102000 Sobic002G233700 Sobic002G233700 Sobic007G052400--Sobic002G233700 Sobic007G225500--Sobic003G002300 Sobic010G035400 Sobic010G035400 Sobic007G225500--Sobic010G035400 Sobic007G225500--Sobic008G102000 Sobic007G225500--Sobic007G052400 Sobic007G225500--Sobic008G171300 Sobic007G225500--Sobic009G043000 Sobic002G275300 Sobic002G275300 Sobic007G225500--Sobic002G275300 Sobic006G077400 Sobic006G077400 Sobic007G225500--Sobic006G077400 Sobic007G225500--Sobic010G201700 Sobic009G140600--Sobic003G002300 Sobic009G140600--Sobic008G102000 Sobic003G378600 Sobic003G378600 Sobic009G140600--Sobic003G378600 Sobic003G387800 Sobic003G387800 Sobic009G140600--Sobic003G387800 Sobic001G122300 Sobic001G122300 Sobic009G140600--Sobic001G122300 Sobic005G194100 Sobic005G194100 Sobic009G140600--Sobic005G194100 Sobic009G140600--Sobic007G052400 Sobic001G005200 Sobic001G005200 Sobic009G140600--Sobic001G005200 Sobic009G140600--Sobic009G043000 Sobic009G043000--Sobic010G201700 Sobic009G043000--Sobic003G002300 Sobic009G043000--Sobic008G102000 Sobic001G102800 Sobic001G102800 Sobic009G043000--Sobic001G102800 Sobic009G043000--Sobic007G225500 Sobic004G272100 Sobic004G272100 Sobic009G043000--Sobic004G272100 Sobic006G207800 Sobic006G207800 Sobic009G043000--Sobic006G207800 Sobic009G043000--Sobic009G140600 Sobic009G043000--Sobic001G519800 Sobic008G102000--Sobic003G002300 Sobic008G102000--Sobic009G140600 Sobic008G102000--Sobic009G043000 Sobic008G102000--Sobic007G225500 Sobic008G102000--Sobic002G051100 Sobic008G102000--Sobic004G272100 Sobic007G173800 Sobic007G173800 Sobic008G102000--Sobic007G173800 Sobic008G102000--Sobic007G052400 Sobic008G102000--Sobic003G378600 Sobic002G051100--Sobic003G002300 Sobic002G051100--Sobic001G519800 Sobic002G051100--Sobic004G272100 Sobic002G051100--Sobic008G102000 Sobic001G489000 Sobic001G489000 Sobic002G051100--Sobic001G489000 Sobic002G051100--Sobic009G140600 Sobic002G051100--Sobic010G201700 Sobic002G051100--Sobic003G387800 Sobic007G004800 Sobic007G004800 Sobic002G051100--Sobic007G004800 Sobic010G201700--Sobic009G043000 Sobic010G201700--Sobic004G272100 Sobic010G201700--Sobic003G002300 Sobic010G201700--Sobic001G102800 Sobic010G201700--Sobic001G519800 Sobic010G201700--Sobic007G225500 Sobic010G201700--Sobic008G102000 Sobic010G201700--Sobic006G207800 Sobic004G308700 Sobic004G308700 Sobic010G201700--Sobic004G308700 Sobic001G519800--Sobic004G272100 Sobic001G519800--Sobic001G102800 Sobic001G519800--Sobic003G002300 Sobic001G519800--Sobic002G051100 Sobic003G431700 Sobic003G431700 Sobic001G519800--Sobic003G431700 Sobic001G519800--Sobic010G201700 Sobic001G519800--Sobic004G308700 Sobic001G519800--Sobic007G004800 Sobic008G053200 Sobic008G053200 Sobic001G519800--Sobic008G053200 Sobic010G005500--Sobic007G052400 Sobic010G005500--Sobic003G002300 Sobic010G005500--Sobic009G030900 Sobic010G005500--Sobic009G183700 Sobic002G277100 Sobic002G277100 Sobic010G005500--Sobic002G277100 Sobic010G005500--Sobic003G387800 Sobic010G005500--Sobic004G012900 Sobic010G277600 Sobic010G277600 Sobic010G005500--Sobic010G277600 Sobic009G059300 Sobic009G059300 Sobic010G005500--Sobic009G059300
Octagon: transcription factors


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