Gene annotation
| Transcriptome id | Sobic.003G431700.1 |
|---|---|
| Synonym | Sb03g046340, ATLFNR1, FNR1 |
| Functional annotation | ferredoxin--NADP reductase, chloroplast precursor, putative, expressed |
| UniProt | C5XIJ3 |
| Pfam | PF00970 PF00175 |
| Panther DB | PTHR19384 PTHR19384:SF82 |
| NCBI CDD | - |
| KEGG Orthology | K02641; ferredoxin--NADP+ reductase |
| Gene Ontology | GO:0016491; oxidoreductase activity |
Orthologs (automatic annotation)
| TAIR | AT5G66190 : ferredoxin-NADP(+)-oxidoreductase 1 |
|---|---|
| RAP-DB (Rice) | LOC_Os06g01850.1 : ferredoxin--NADP reductase, chloroplast precursor, putative, expressed |
| MaizeGDB (Corn) | Zm00025a050303 , Zm00025a025927 , Zm00025a053751 , Zm00025a039088 |
| Brachypodium | KQJ92782 |
| Barley | HORVU6Hr1G000620.4 , HORVU6Hr1G000620.1 , HORVU6Hr1G000620.2 , HORVU6Hr1G000620.3 , HORVU7Hr1G002210.5 , HORVU7Hr1G002210.3 , HORVU7Hr1G002210.6 , HORVU7Hr1G002210.4 , HORVU7Hr1G002210.2 , HORVU7Hr1G002210.1 |
| Wheat | TraesCS6A02G009200 , TraesCS4A02G472500 , TraesCS6D02G012200 , TraesCS7A02G020500 , TraesCS6B02G015000 |
| Populus | - |
JBrowse
| Sobic.003G431700 |
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.001G519800 | glyceraldehyde-3-phosphate dehydrogenase, putative, expressed | K05298: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) |
| 2 | Sobic.003G398800 | expressed protein | - |
| 3 | Sobic.006G207800 | Plastid-lipid associated protein PAP / fibrillin family protein(PubMedID : 26465154)@PAP fibrillin family domain containing protein, expressed | - |
| 4 | Sobic.002G370600 | - | - |
| 5 | Sobic.006G238200 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed | - |
| 6 | Sobic.004G308700 | photosystem I light harvesting complex gene 5(PubMedID : 26465154)@chlorophyll A-B binding protein, putative, expressed | K08911: light-harvesting complex I chlorophyll a/b binding protein 5 |
| 7 | Sobic.004G272100 | phosphoribulokinase/Uridine kinase family protein, expressed | K00855: PRK, phosphoribulokinase |
| 8 | Sobic.010G181300 | SOUL heme-binding protein, putative, expressed | - |
| 9 | Sobic.001G102800 | expressed protein | - |
| 10 | Sobic.003G002300 | Glucose-6-phosphate/phosphate translocator-related(PubMedID : 26465154)@-(PubMedID : 26976818)@triosephosphate/phosphate translocator(PubMedID : 27016024)@DUF250 domain containing protein, putative, expressed | K15283: solute carrier family 35, member E1 |
| 11 | Sobic.009G056700 | 6PF-2-K/Fru-2,6-P2ASE liver isozyme, putative, expressed | K01103: 6-phosphofructo-2-kinase / fructose-2,6-biphosphatase 3 |
| 12 | Sobic.010G245200 | expressed protein | - |
| 13 | Sobic.007G225500 | expressed protein | - |
| 14 | Sobic.010G201700 | GA16396-PA, putative, expressed | - |
| 15 | Sobic.007G053800 | RNA polymerase sigma factor, putative, expressed | K03086: RNA polymerase primary sigma factor |
| 16 | Sobic.007G009200 | adenosine monophosphate kinase(PubMedID : 26465154)@AMP kinase(PubMedID : 26976818)@adenylate kinase, putative, expressed | K00939: adk, adenylate kinase |
| 17 | Sobic.001G491000 | ribulose-phosphate 3-epimerase, chloroplast precursor, putative, expressed | K01783: rpe, ribulose-phosphate 3-epimerase |
| 18 | Sobic.002G112400 | PGR5-LIKE A(PubMedID : 26465154)@expressed protein | - |
| 19 | Sobic.006G101500 | expressed protein | - |
| 20 | Sobic.005G089600 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Sucrose phosphate synthase genes(PubMedID : 24456189)@sucrose phosphate synthase(PubMedID : 26616172)@Sugar synthesis(PubMedID : 27330561)@sucrose-phosphate synthase, putative, expressed | K00696: sucrose-phosphate synthase |
Gene co-expression network
Octagon: transcription factors
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